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Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomaMG18500_complete:A_BomaMG_comp25568_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000166 F nucleotide binding
GO:0000178 C exosome (RNase complex)
GO:0000398 P mRNA splicing, via spliceosome
GO:0000460 P maturation of 5.8S rRNA
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006397 P mRNA processing
GO:0006401 P RNA catabolic process
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_BomaMG_comp25568_c0_seq1
Sequence
(Amino Acid)
MSDINSLFDCFDETPITEAAIQLPNVKNVEKPKLEELTAAGNKRAHDDIQYADTSVSKKP
REEEEDSELITDINVDLLQSRIVIHTLETHEGCTHEVAIPPNQEYAPLLPLTTEPVKQYS
FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQ
KYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYM
RDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHVIYTEYRPTPLQ
HYIFPAGGDGIHLVVDEKGIFKEDNFNTAMTVLNNAGEAAKGDQRGRRGGPRDKNQTNIF
NIVKMIMERNFAPVIIFSFSKKDCELYALQMAKLDFNTIEEKKLVDEVFSNAMDVLSEED
RKLPQVENVIPLLRRGIGIHHGGLLPILKETIEILFGLGLIKALFATETFAMGLNMPART
VVFTNCQKFDGKEVRFISSGEYIQMSGRAGRRGLDDKGIVILMIDEKVTPTVVKGMVQGK
ADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQAAIPDLIDKVKAKQKQYDAL
SVNEENSVASYSTIRTQLDLLGDQFRSFITKPEYLKPFLQPGRLVKVKTEKYEYDWGIIV
NFRHKSNKGKKGQEENPLPAEPAIIVDILLHVKTAAGGDGETNVPCPPGESGDVQVVPVV
HTLIYQISSLRVYYPKDLRPSDNRKSVLKTIGEVKKRFPDGPPLLNPINDMKINDSVFKQ
CVDRIKLLEERLYSHPIHTDKNRSALTAAYDKKQELYEELQNAKAELKKAKSILQMDELK
KRKRVLRRLGYCTAADVIEMKGRIACELSSADELLLTELIFNGVFNALTPEQSAALISCF
VCDENSTQASVSGEELRGVLRQLQEYARRIAKVSIDSKMDLDEDTYVSKFKCTLMDVVLS
WAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSDAIKMLKR
DIVFAASLYM
*(342 a.a.)

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