SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomaMG13861_3prime_partial:A_BomaMG_comp24633_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016246 P RNA interference
GO:0016787 F hydrolase activity
GO:0035145 C exon-exon junction complex
GO:0035195 P gene silencing by miRNA
GO:0046872 F metal ion binding
GO:0071456 P cellular response to hypoxia
GO:2000624 P positive regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
RNA-seq EntryA_BomaMG_comp24633_c0_seq1
Sequence
(Amino Acid)
MSVEAFDPSSQSLTFLETEEGDFIGADTQGSEFEFTDFTLPSQSQTQASQHDHGLSSSNQ
VNGIGRVELSSKISNVTNTIPELQFEEEDEALYSNKELPDHACKYCGIHDPATVVMCNIC
NKWFCNGRGNTSGSHIINHLVRAKHKEAALHRDGPLGETLLECYSCGARNVFVLGFIPAK
ADSVVVLLCRQPCAAQSSLKDMNWDQEQWKPLISDRAFLSWLVKVPSETEQMRARQVTPQ
QIGRLEELWRDNVDATFQDLEKPGVDEEPHQVLLRYEDGYQYQNIFGPLVKLEADYDKRL
KESQTQEGIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGEMHKAWSGVGHV
IKVPDNYGDDVGLELKSGAGAPLDCTSNFVVDFIWKSTSFDRMQLALRKFALDDSSVSGY
IYRRLLGHEVEEVLFRVHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTV
TSATIVYQLVRQNGGPVLVCAPSNTAVDQLTEKIHRTGLKVVRLCAKSREAMESSVSFLA
LHEQARALGSADSELRKLTRLKEEAGELSAADERRYRSLRRAAERRLLDAADVICTTCVG
AGDPRVARMRFQSILIDEGMQSTEPECMVPVVLGARQLILVGDHCQLGPVVMCKKAAKAG
LSQSLFERLVVLGIRPFRLEVQYRMHPELSRFPSDFFYEGSLQNGVSAEERRLHKIDFPW
PRPDRPMFFYVTQGQEEIAGSGTSYLNRTEAANVEKLTTRFLKAGVRPEQIGIITPYEGQ
RSYLVQHMQYQGSLHAKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQGIGFLSDPRRL
NVALTRAKYGLIVVGNPKVLSKQPLWNHLLAFYKERRVLTEGPLSNLKESAIQFAKPKKL
VNSQNPGSHFMSTSMFDAREAMVPGSIYDRARPPRDPLAYVGPER
(314 a.a.)

- SilkBase 1999-2023 -