SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomaMG11612_3prime_partial:A_BomaMG_comp23844_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030014 C CCR4-NOT complex
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
RNA-seq EntryA_BomaMG_comp23844_c0_seq1
Sequence
(Amino Acid)
MSVLNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRKAY
PENPADFIPLSQEQVAAIKTEKKAREQKRRNKTLESRRALANVRVVQNNLVFVVGLPVRL
ADPEILKRQEYFGKYGKIHKVVINQSTTYAGSQGPSASAYVTYVSSADALRAIQGVNNVT
LDGRVLKGSLGTTKYCANFMKNQPCPKPDCMYLHDLGDPKASFTKEEMHAGLHQVYERKL
HNQLLASQQRDKNNEDKHLNGSGNSSTNAEKSGSKDGNQSNYIPTTVVTSSHINNVVNSK
SKEECANGSTSSSSSSSSRSDSSDSSSSSSGSSANGKEAWPSLGSSPPSDSPARKQTSPK
PQQLHVKSQENGISGSSSPTELHTDTAQQQAQTRNVKETHTDTNRTRNKDTNGTSTHTKK
SKNEKSKHKPSHSTDTGPADDAPRPHSSVFETDSQHNYISNDLDELESDRHSLLETHDLL
ESSDHSLLDDDTHDLLNDAGDVLMMQRHRDMLAGLVDGGHLLPQLKGPVLNGYGLLDRDI
SYVNDRPISQMNQGLLDQKEMLLREREQSDMLLRQRELLARQHNVMVEPKHYMPASSIGM
ESASELLGANYHRSPSMVPAFGALPPYALPRP
(209 a.a.)

- SilkBase 1999-2023 -