SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

ORF from Assembled RNA_seq Entry

NameO_BomaASG10797_3prime_partial:A_BomaASG_c28679_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		splicing_factor_3A_subunit_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
RNA-seq EntryA_BomaASG_c28679_g1_i1
Sequence
(Amino Acid)
MPSIDVMLPPGQPLEIPEDPPPPPPPVIGIIYPPPEVRNIVDKTASFVARNGPEFEARIR
QNELGNPKFNFLNSGDPYHAYYQHKVREIKEGKVPEPTAPPTMPSGQQRMGLAPATAARQ
QELLKAAAPAELPPPRDPPPDFEFIADPPSISALELDIVKLTAQFVARNGRQFLTDLMKK
EERNHQFDFLRPQHSLFQYFTRLLEQYTKVLLPPKELVSKLNAEIRSGILEQARSRAAWH
AHQAKRKAADEAKIEKERLAYASIDWHDFVVVETVDYPAGEPGDFPPPTTPLEVGARVLA
QERGEDIIRNQNDDDDTEMQIESESESESDEELAEMEDRTQSHRPDDNRVQDMEEESSTS
ESETEQDAPRADEAPLPPRPDRVVVKKYNPKEAKPRAAAGDEWLVSPITGEKIPASKVAE
HVRIGLLDPRWLEQRDRAAAERTDRDEALAPGAAIEASLKQLAERRTDIFGVGDEETTIG
KKIGEEEKKRDERVTWDGHTSSVEAATRAARAHITLEDQIQQIHKVKGLLPDEEKEKIGP
KPVTGAAQSRAGRPPAPPSAP
(186 a.a.)

- SilkBase 1999-2023 -