SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27322_c0_seq15
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_21268_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:0.13 TPM:0.11
ORF EntryO_TrvaMG18332_complete:A_TrvaMG_comp27322_c0_seq15
Sequence
(Nucleotide)
AAGTATCTATACTTAGATATAAATTATTATTTACTTAATAGAAAGTAAACGGAAATTATC
ACATACATTTGTATGGAAATTATAGTTTGGTCATTTACATCAAGAAACAAAATATTTCCA
AACACGGTATAATTAGAATTTCTATCACATCAGTATTTGTCACAAAATCTACAATAGAAA
ATTGCCAAGCGCAATAACAAAACTTAATTAATCGAATTATTTTGCTATAACTATTAAGCT
TTTTATAAAATGTTTCGCTAACCTGAAATTACTAAATACCCGAAAACTTTACATGACAAT
ATTTTTAAACTTATGTCTAAATTAAAAATGTCTATTTCTAACATAAATGAGATACATAAG
AATAATGCAGTTAAAGAAACTTTGAATCTCATGATCTATAAAGCATTTTGGATTAAAGTT
GAATTAGGACACAACATGGCCCAATTTATTGAAACTGAAGAATTTTCATTCCACAATTTT
GAAAGAGTGAAACAAAATTTATCTTGAATAACCATTTTAAAAATATTGCGACAGATACAG
ATTTATACATAAGCGATACAATACTTAATAGTCTTTAGATGATATTTAAAATGTTTTACT
TGGTGAAATTTAAATATGTGACATATTTATATCGAATATCGCACTAATCGAATAATAAAA
AATCTAAAACTAATCCGGTAAGTGCGCTACTTCGATGTTTATGATGAAAGTTTAACGTCT
CCTCCGTCGACGGGAATCGCCATTATAACCGTTTTCTGAACGTGATCGGCTACGGGAACG
AGATCGGGATCGCGAACGGCTTCTTGACGATCTTGAAGATTTACTTCTAGAGGACCTTGA
CGAACTATGGCGGCGGCGTCGGCGGTCTCGGGAGCGCGACCGTGAGCGAGAGCGGCGTCT
GCGCGACCTAGACCTAGATCGAGAACGTCTGCGGCGATACCGACCACCTCGCCCGCGATG
ACGACGTCCGCCGCCACCACCACCTCTTTGTTCGGAAAGTTCTTGTAACTTCGGATTTAC
AACTTGTTTGGCTTCCTTCAGCACAGAAATTAAATCAGAAGCCTTAGCAGCATTAGAGGG
AGTAAAAAACGTATATGCCGTTCCGGTTTTATTTGTTCTCCCTGTTCTTCCGATACGGTG
TACGTAATCTTCAGAATTGCTAGGATAGTCAAAGTTGATGACAAATTTTACATCATCAAC
ATCTAACCCTCTAGCTGCCACATCAGTAGCCACAAGAATAGGAGCTTTTCCACTACGAAA
ATGGATTCGAGCATGTTAAACAAAATCAAGATCGAGCGAAGCCGGGCGTCGCACGAGCGG
TTGCGAGCCGACAACAGAAAGTCAAGCTCGGGGCTCGAGTGGCACCGAGGTGGGCGCTAT
TAGCGAGCGCCGAGACGAGCGCCGCAGCGCCCATCGCGAGCGAGAAGCGACTCCGCAGGG
CCGCGGGAGCGAGCCCGAGTGCGTGGGGGCTTAGGCCCGACTACGTGCAGCCGCGGCGCC
GCACGCCCCGCTCGGCCGCAGCTCCCCGCCTGCACATCACACGCAACACTTCAGACAACC
TCACTCACTGCACGCTCCCGCAACGCAACCCGCGTCCAACGCGCACAGACGCCAAGCCTC
CTCCCCTCTTTTGCTCCTTTACTCTTTTATTGAATCTCATTTCATTTTTATTTCAGAAAT
ATTTGAATATGGCAATTTGTATTTTCAATTATACAGAAAACAATATCAATAGATTAAAAA
TCTTACCTTGCAACACCCAGTCTCTTTCATTTTGTGACTTATCACCATGAATACACACTG
CAGGCCACCCATCTCGTTTCATTTTTCTAGTTATGTCATCAACACGTCTTTTGGTTTCAA
TAAATATAATAGTTTTATTTTCCTTTTCGGCCATAATCTCTTTCAGTAAAGTGCTCAATT
TGGTTTCTTTTTCATATTCCATACATACATCAATAATTTGTAATATGTTATGGTTAGCAG
CAAGCTGGAGAGAGCCAACATTAATTTGAAGATAATCTTTTAAAAACTCTGAAGCCAAGC
TCTGTACCTCTCGGGGCCAAGTAGCAGACCACATAAGAGTTTGACGGTCAGGTCTTATTT
GTTCAATTATTTTTCTTATTTGCGGTTCAAAACCCATATCCAACATTCTGTCAGCTTCGT
CAAGTACAAGATATGTACAACGTTTCAAGTTTGTGCGTTCACTCTCTAAGAAATCAAGCA
GACGACCAGGAGTTGCAATCACAATTTCCACACCGGCATCCAAGTCTCGAGCCTGTGGCC
CTTTAGGTGCTCCACCAAACAAACAAGTGTTGTGAATTTTAGATGTGTTTGCAAACTTAT
CACAAACTTCTTGTATTTGTTGAGCTAATTCTCTGGTAGGAGCTAAGACAAGTGCTATTG
GTCCATCTCCTCTGCTTGATTTTGGCTGATTGTTTATATGCACAATAGCAGGTAGAATAT
ATGACAGAGTTTTCCCAGAGCCTGTTGATGCTATTCCTACCATATCATGACCACTGAGGG
CAATCGGCCATCCTTGTGCCTGAATAGGAGTAGGCTTGGAAAATCCCATTTTGTCTATTT
CATCCATAACATAGTCTGGAAATCCAGCTTCGTCAAATGTTAAAGTGGGTTTGGGTATGT
TTCGACCTTTCAAAGTTATTTCATTTTGACTTCTCCATGCCTCCACATCCGATTCGAGTC
TTTTCTCAACATCTGGGTGAGGAACATAAAAATCTTTCTTAAATGGTTTTAACCGTTTTA
AATCCCATTTAGGTTTCCGAAGATTGGCGCCTGGGTTATTTCTGCGGCCTCCGCCGCCGC
CGCCGCCATAACCGCCTCCAGAACCGAGACCGTAGCGGGGACTTCTGCTGCGACTGCGAC
TCCTACTGCGGCTACGACTTCGACTGCGCCGTCGATCTCGACTGCGATCCCTTCCACGAC
CCATTGTTCTCTAAAACAAACAATTGCACAACACTAGCTTAAAAAAAACTATAAATCCAC
TGAACTAGAGTAAGAGAAATTCTATCAACTCGATTTTGCCAAGTTAAGCCGCTAATCACA
AACTACAGAACAAAACCAACACAGTAGAAAAACAAAATGGCCGGAAGACGGATTCCGG
(3118 bp)

- SilkBase 1999-2023 -