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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27322_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_21268_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003713 F transcription coactivator activity
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009791 P post-embryonic development
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030331 F estrogen receptor binding
GO:0033148 P positive regulation of intracellular estrogen receptor signaling pathway
GO:0044822 F RNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0072358 P circulatory system development
GO:2001014 P regulation of skeletal muscle cell differentiation
Transcript
Level		FPKM:11.19 TPM:9.42
ORF EntryO_TrvaMG18300_complete:A_TrvaMG_comp27322_c0_seq1
Sequence
(Nucleotide)
AAAAAATCTGCATTATTATTTTTACAGTTATATTAACCCTTATCCATTCACATGTAATGC
CCCAGATGCGAGTATGGTCGTCAATAAGTTTGTAGATTGTTGGTTAGCATGTATTCACAT
GCCTGTGTATGCATGAAGTTTATGTATGTTGTAGTAAATACATTTGCATTGGTTTGAATA
TAACAAACCTCTATAATTCACCGTCGTCGATTCCTCTGGCGGTCATTATACCCCACGGAG
CCATTTGCCAGCGCATCGCTCACACCTGGCTGCATCATGCCGTAGGGTGGTCTCCCTGGA
CCAGAATTTTGCTGTCCATAATATTGCATAGGTCCATTTTGGTCAACATTATTAACATTT
TCGTTATGTTGTGGGCCTTGTTCATTCATGAATTTGTTTTTAGGTCCATACGAACCAAAG
GCAGTAAAGTTAGCACCATTGGACCGAGCGTCGTCACCGTGCTGTGGAGGGAGCATGCGC
GGCAGTAGGCTCCCATGGGGTACACCCAGACCGCCAGAGAGTCCGTAGCCGGCAGGCTGG
CCCAGGCCGCCGCCCTCGGAGCCTCCGAGTCCTTGCGACCCGAGACCGCCCGAGTCCAGA
CAGTCATTGTCGCGTCCTCTTCCACGGCGCCGCCTGTCGCGGCCTCTCGACCGTGACCCG
GAAGAGTCGGAGCCGAGGCCCCCACCGGAACCGTTATCAGCTCCGAGGCCTCCGCCGGAA
CCGAGGCCACTGCTCGAGCCGAGCCCGCCGTTAGAGCCCAAGCCACCTCCAGCTCCGAAA
TTACTGCTCGAGCCGAGACCTCCACTGGAGGGAGAAGGCCCTGCAGTGCCGCTGCCAAAG
CCATAGCGATTTCTGGAATCTAACTCGAGGCCACTATGACCTGAGCCTCGACCGTGAGTC
CCATTGGCCACATTGGAAGGTGGGGGCGGAGGAGGGGGAGGAGGAGGAGCAGACCAGCCG
CCCGCAGAGAGCATAGGATTAGGACCGAAATTGGGGACCATCATACCATACTGATCAGCA
GGGAAAAACGAAGGCATTACAAAAGCAGCATTAGTCATTGAAGGAGGAGGTATTGACATA
TTCATTTGGGCATTTAAAGTCATGAGTGGTGGTATTTGGTTTGGAGGTGGATGTTGTGTG
TTCACTTGATTGATGGTATTAACATTATTGAGATTATTGTTATTACCAACGCCGTTTTCT
GGCACTTCAGGTCTGTTAGGAAAATGTACATCATTTTTGGAAGGAATTGGTGGAGGTCTG
TTATTAAATCGATCAGCAACCGGAAGTTGTGGGCCAATGGGAGTCGGTAATAGTGTTTTC
GGTGTAGGTAGCAATGCCTGAGGCGCCGGCTTGGGCGTATTCTCCACAGAATCCTTCACT
GGACTGCACTTGCCTGAACGTGATCGGCTACGGGAACGAGATCGGGATCGCGAACGGCTT
CTTGACGATCTTGAAGATTTACTTCTAGAGGACCTTGACGAACTATGGCGGCGGCGTCGG
CGGTCTCGGGAGCGCGACCGTGAGCGAGAGCGGCGTCTGCGCGACCTAGACCTAGATCGA
GAACGTCTGCGGCGATACCGACCACCTCGCCCGCGATGACGACGTCCGCCGCCACCACCA
CCTCTTTGTTCGGAAAGTTCTTGTAACTTCGGATTTACAACTTGTTTGGCTTCCTTCAGC
ACAGAAATTAAATCAGAAGCCTTAGCAGCATTAGAGGGAGTAAAAAACGTATATGCCGTT
CCGGTTTTATTTGTTCTCCCTGTTCTTCCGATACGGTGTACGTAATCTTCAGAATTGCTA
GGATAGTCAAAGTTGATGACAAATTTTACATCATCAACATCTAACCCTCTAGCTGCCACA
TCAGTAGCCACAAGAATAGGAGCTTTTCCACTACGAAAATGGATTCGAGCATGTTAAACA
AAATCAAGATCGAGCGAAGCCGGGCGTCGCACGAGCGGTTGCGAGCCGACAACAGAAAGT
CAAGCTCGGGGCTCGAGTGGCACCGAGGTGGGCGCTATTAGCGAGCGCCGAGACGAGCGC
CGCAGCGCCCATCGCGAGCGAGAAGCGACTCCGCAGGGCCGCGGGAGCGAGCCCGAGTGC
GTGGGGGCTTAGGCCCGACTACGTGCAGCCGCGGCGCCGCACGCCCCGCTCGGCCGCAGC
TCCCCGCCTGCACATCACACGCAACACTTCAGACAACCTCACTCACTGCACGCTCCCGCA
ACGCAACCCGCGTCCAACGCGCACAGACGCCAAGCCTCCTCCCCTCTTTTGCTCCTTTAC
TCTTTTATTGAATCTCATTTCATTTTTATTTCAGAAATATTTGAATATGGCAATTTGTAT
TTTCAATTATACAGAAAACAATATCAATAGATTAAAAATCTTACCTTGCAACACCCAGTC
TCTTTCATTTTGTGACTTATCACCATGAATACACACTGCAGGCCACCCATCTCGTTTCAT
TTTTCTAGTTATGTCATCAACACGTCTTTTGGTTTCAATAAATATAATAGTTTTATTTTC
CTTTTCGGCCATAATCTCTTTCAGTAAAGTGCTCAATTTGGTTTCTTTTTCATATTCCAT
ACATACATCAATAATTTGTAATATGTTATGGTTAGCAGCAAGCTGGAGAGAGCCAACATT
AATTTGAAGATAATCTTTTAAAAACTCTGAAGCCAAGCTCTGTACCTCTCGGGGCCAAGT
AGCAGACCACATAAGAGTTTGACGGTCAGGTCTTATTTGTTCAATTATTTTTCTTATTTG
CGGTTCAAAACCCATATCCAACATTCTGTCAGCTTCGTCAAGTACAAGATATGTACAACG
TTTCAAGTTTGTGCGTTCACTCTCTAAGAAATCAAGCAGACGACCAGGAGTTGCAATCAC
AATTTCCACACCGGCATCCAAGTCTCGAGCCTGTGGCCCTTTAGGTGCTCCACCAAACAA
ACAAGTGTTGTGAATTTTAGATGTGTTTGCAAACTTATCACAAACTTCTTGTATTTGTTG
AGCTAATTCTCTGGTAGGAGCTAAGACAAGTGCTATTGGTCCATCTCCTCTGCTTGATTT
TGGCTGATTGTTTATATGCACAATAGCAGGTAGAATATATGACAGAGTTTTCCCAGAGCC
TGTTGATGCTATTCCTACCATATCATGACCACTGAGGGCAATCGGCCATCCTTGTGCCTG
AATAGGAGTAGGCTTGGAAAATCCCATTTTGTCTATTTCATCCATAACATAGTCTGGAAA
TCCAGCTTCGTCAAATGTTAAAGTGGGTTTGGGTATGTTTCGACCTTTCAAAGTTATTTC
ATTTTGACTTCTCCATGCCTCCACATCCGATTCGAGTCTTTTCTCAACATCTGGGTGAGG
AACATAAAAATCTTTCTTAAATGGTTTTAACCGTTTTAAATCCCATTTAGGTTTCCGAAG
ATTGGCGCCTGGGTTATTTCTGCGGCCTCCGCCGCCGCCGCCGCCATAACCGCCTCCAGA
ACCGAGACCGTAGCGGGGACTTCTGCTGCGACTGCGACTCCTACTGCGGCTACGACTTCG
ACTGCGCCGTCGATCTCGACTGCGATCCCTTCCACGACCCATTGTTCTCTAAAACAAACA
ATTGCACAACACTAGCTTAAAAAAAACTATAAATCCACTGAACTAGAGTAAGAGAAATTC
TATCAACTCGATTTTGCCAAGTTAAGCCGCTAATCACAAACTACAGAACAAAACCAACAC
AGTAGAAAAACAAAATGGCCGGAAGACGGATTCCGG
(3756 bp)

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