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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27313_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cyclin-T1_[Papilio_polytes]
Ontology
GO:0000278 P mitotic cell cycle
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007015 P actin filament organization
GO:0007419 P ventral cord development
GO:0008023 C transcription elongation factor complex
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0008360 P regulation of cell shape
GO:0009408 P response to heat
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019901 F protein kinase binding
GO:0032783 C super elongation complex
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:0.90 TPM:0.75
ORF EntryO_TrvaMG18140_complete:A_TrvaMG_comp27313_c0_seq2
Sequence
(Nucleotide)
CGCTCCACTTTTGTAATTTTCTTTGAAAATCTTATGAAATGTCTGTGTTTGTTGCAGATC
ATCAATCTGTCACCGGAGATCTTACTGCGTTAACCACCAAGTTTTACAATGGCGTCAGCT
TGAAAATCCCTATCACGATTTTGTTTTGTGATGTAACTTAAAACATAGGTTTTTATTATT
TTGTTGTGTTTCAATAATTTCAAGTTATTTTTGAGTTAATTATTAGTGATTTATAATAGC
TTTTTCTTGTAAAATGATAAGTTTTTAGTTTATCAAGCACTCAAATGTTAACGTGGTCTT
TATCCGGTTGCCGCTGTGCTAGCGCTGTCCCTTTCCCACTCACGCACCTAGACGGAGCGC
TGCTATCCGTCGTGCTTTCTCGCGCGCAGTCAGAACATCCGTTCAATGGCTGGTGGGCAA
GAAAAATGGTATTTTACAAAAGAACAGCTACAGAATTCACCAAGCAGAAAATGCGGTTTA
GATGCAGATAAAGAATTAGCTTATCGGCAGCAGGCCGCGAATTTAATACAGGATATGGGA
CAGAGGCTTCAAGTCTCTCAATTATGTATCAACACGGCGATTGTGTACATGCATCGTTTC
TACGCGTTCCACTCGTTCACGCAGTTCCACAGGAATGCCATTGCAGCTGCAGCACTGTTT
CTGGCTGCGAAGGTGGAAGAGCAGCCAAGGAAATTGGAATATGTTATAAAAGTGGCCCAC
GTTTGCCTCCACAGAGGTGAGGGGGTCAACGCGCTCATCGGCGAACAATATCAGGAGCAG
GCCCAAGACCTAGTCTTCAACGAGAACGTTCTCCTACAGACGTTAGGTTTCGATGTAGCG
ATCGATCATCCGCACACACACGTCGTGAGAACATGTCACCTTGTCAAAGGTGAGACGAGA
GTAGTGTTACGCGTGACGGCACGACGGGACGGATTTGTTTGCGCTCGGCGGGTTCGGGTT
TAAATGCGGATGATTATGGATTTTTTTTGACTTTCGTAGTGGTAGAGGGATTTTTGATGG
TTTTGGATGATGGAGTTTATAGTGGTGAATTTTTTATGACATAGTGAAGTAATTTTATCT
TTAAATATCACGGGGGTGAACCATTTTCCAAATTTTTTTTTTTTTAATTATGTCAAATAA
AATGTCCTTTGACCACACGAAACCGCAAAGAACTCGCCGCGCGAATAAAAACAACAGGCT
ATGTATAACCAACATTAATAAGAAGCGACGAAAGACTTGGCGCAAACATCGTATTTTATG
GCTTCGAATAGTCTGCATTTGACGACGATGTGCCTCCAATACAAACCGACCGTCGTTGCC
TGTTTCTGTATACATTTAGCTTCGAAATGGAGCAATTGGGCTATCCCACAATCGTACGAG
GGTCGCCATTGGTTCTCGTACGTAGACAAGACTGTTACTATGGAATTATTAGAAAAATTA
ACGGCAGAATTTCTACTTATATTCGAGAAATGCCCGTCTAGGTTAAAAAGGAAAATGATG
AATGTTAAAGCGGCCGATGGCAGTTCACCTTCGTTAGGACAGCATGGCTCAGGACCGAAC
CAAGCGTCACCGTTTGACAAGAAACACGGTCACTCCAGCTCAACTAGCGATGAAATAGAT
AAATCATTTGATAAAGAATACGAGCGTGAAAGGCGACGTCAGCCCGTCCCCGGTAGCTAC
GTGCCCGCCCCTTCAGCACCCACACAACCCCCACCACAGAAACTAGACTTCAACCAATAC
AGGGAGAAGAGAGAGAGGGAAGAACGAGAACGACGCGAGGAGAGAGCGAGACAAGCGCAC
CAACAGCGAGCCAACCCCGCCCAGCGGCCAACACAGCCCCCGCACCAACGGCCACACCAC
AAACCCCACCCGTGGCCGCCACAGAAACCCCAGCAGAAGCCACACGACCACCGACACAGG
CCCGTGCCGTCTACGTCGGCGGCGCCAGCACAGTCCGTCCAAGAGGTGCCGCAGAGGACG
CGACCGCCATCTTTGTTCTCGCCCGAGAGCGCGACCACGCCCACTGCGGCCGCTGCTGCC
CCTCGCCGCCCGCAACCACCCGTACAACCGCACCCGCAACCGCAACCGAGACCCAAACCA
GAACCAAGGCACCCGCCTCTCGAGCGACCCCCCAGCCCGAGAAAGAGGCCCGATGCCACA
ACAGCCATCAAGGAAATGCAACCGCCCGCCATTTTATCTCCGTTTTCGTCACCTCCGTCA
CTAGAAACTAAACCTAGACAGACGGTGCACTCGAATTCGGAACCGGAATTAGTGCCTGTA
GTCAAGAAAATAGACGAAACGCCCGGCTACGAGAATATTATTAAGGAAAATCAGAGGATA
ATGAAAAATAAAGTGCCGGAGAGAAAGCCTGAACCACCTCCTAGGGCCCTCAACGGCATC
GAAACAGACCCCACACTAGTATCTAATCTATTAAAAGAAAGTTTAGCGAAACCCGTTCCT
ATATCGGTGCCCACTGAAAAGAAATCGCCCGTAGAAGTTAAAAGAGAGGTTGTGGAACCG
CAACCGCCGCCCGTCCAGCCGCAACCGCAACCGGAGCCGCAACCCGCCGACACCGACCAA
AAACACAAGAAAGACAAAAAGAAAAAGGAGAAACACAAACACAAAGACCGCGACAAATCG
AAAGAGGAGCGCAAAAAACATAAAAAAGACAAAGACAAGAAGAACAGTCCGCCGCAAGTT
GACAACCAAGATGGCGCCTTAAGGATAACTATACCTCGCGAGAAGCTATCCACGAGTCCC
GGGCAAGGGTTGAAGATAAAGATACCTAAAGAAAGACTGGCCGCGCCTCCCCCGCCGCCG
CAGCATCCCCAAGCCGGCCTCAAGATCAAGATATCAAAGGAAGTGCTCGAAAGTTCCCGC
AAGCGACCCGCCGAGGCAGGCCTGCAAGGACCCCCCGGCCCGCCGAAGCTGCCGAGACAC
AACGGAGCACCCAAGGTCGTCGACTCGGCGATGGGGAACGGGCACCACAAGTGACGTCAC
ACGGTCCGGAAGCGACGTGTGTCGACGTTCCTCAGACAACAACTAACGGACCTCACTAGT
GTATCGGGTTTTTTTTTTTGTTTAATATTTTCAGCGGCTCGCGGTTTGCGAATTCGGAGC
GCGTTGGCATGTTTGAATATAAACTACAGTGTAAATGTGATTGAAAATAGTTTGGAAGGT
GGATTTGTAACTGAACAGCTGATTTGGGGTGAATGAACTATCTATATACAACTTAAAGCA
CTTTTGGGAGTCGTCTTTTTTCTGATATTGTATGGTGTATGACTATCGTAGCGAACTCCC
ATATGATATTTGAAAAAAAAACAGGTTAACCGATAGAAAAAGTAAAAATGGTTCAACACC
ACTTTAGCTGGTCCAAAGTTACAGATTCACACTGTACATGAATAGTAAATTGATGTGATC
GAACAAACAAAGCAATAATATTGGTTGTGCGTTAGTTTTGAAATTAAAACGTTTTCCGAA
TTTGTAAACTCTTGCTAGGCCTACTGGCCGTATGTGGCGGGACACTTTGACCATAGTTAC
ATTACGTTACATTTATATAAAACCAAATTTGGCTTAAATCAATCCCTAGTAAGTAAACCT
AGTAGTAAATCTAAAGTTTGAATTCGTTATTCCTAAATATCAGTTTATATTGCCAACAAT
TGGCGATTTACCCTAATAGGGTAACCGACCCAAATATTTTTAAAATTGTGATGTAATAAA
TAATAGATATCTTAATTTCATGGTTAATAATTGTACGTCTTATTTTATTTTTTCACTTCG
ATTATTTAAATGTTCAGATTTTAAAATGACAATGGTAGAGGTCTTAGTTTCCTGCCTCGT
ACGTAGTTGTAACATTTTTACGTTGTCGGACTGCGCGGTTTTGGCTCATTTGAATTTCAA
ATGTTCACGGCCTGACGCAACCAGTCGCTTGTCTGTGCTTGTCACTGCCCGTCGTGACGT
CGGACGGGTGTGGCGTCATTAAGGAGTTCATCCTGCCGTTTGAATTTTGAAAGGTTTTGG
CGTTTTTTAGACCTATAGATAGGATGCATAATAATTATTCAAATATGTAGAAGATGCTGA
CATTGGTTGTTTCACCCTAAAATAGGGTAAAGTGTACAGTTAAATATTAACATTAAAGAG
AGAGAATTAATTAAACTCGATTTCTTAAATTGGTTTCAGCTATTGTTTAATTTTCACCAC
ATAGGATTGGATGCTACTGTATAGGCCTTTTAAAATTCGAACGGCATAATATCTGTGTAC
AAATTGTGAATATGTTATGTATGTACCAGTGATTTTTATATATAGACTGATCTAATGGGA
GCCAAAATCGTAACATAACTCGCGGTACCGTCGCCAGCGAAATTACACACAAATTTGTTT
CTCCCAATAATTTCGGTGGCGATCGTACAGGTGCGGGGCTCACGATTTAATAGCAAATAA
CGGGTTTCGAAAACTATAAAAAAAAGTTTAAAAATGAAAATAAACAAAAAATGTTGTAAA
TATATGCCGCTAGATGGCGGTTTGGACGCGAAATGTCGCTAGATAATAATCGTGCCGTAT
TTCAAATTATGCTGGAGTATTTAAAGTCGTTTATCCATTTTTTGATATATCGTAAATGCT
ATAATAATATGCCTTACGGCTTTTGTATAAATATATAATGTTTATCCATATTCTGGCTTT
AGTGAGGACTCTGATCGGGATTGTCAAAAATATAAACGACATTTTGAAACATGATATTGC
AAATTTAAGTGTACACGTTAAAGTTATTTTGGGCCCCACTGTTATGCCAAATGCTTAGCT
GACTTCAAAGGAAACCATTAGGATATTTCAACTTAAAAGATTGTACACGTAAATAACAGG
TTTGGATCGCAAAATAAATTTTGAGTAAAAATGTCGGCCTAACCCGCATTTGAGAATAAG
AGCACTGTATTTGGGGCCCAAATTCGCCCCATTAAAAATCGGGCCTAATTTCGTCCGAAG
TAGATATCACGCTGATAAATAATTAAAAGTACTGTCTCATGTAATTTATTTTCTGTGTAG
TTCTTCAATTAATGTTTGATGTCTTTGATTTGAACAGTTTTTACGAGAAAATATATGTTT
TAAATTCTCGTAATTATTGTGCGTTTTTTCTGTGGACAGTACTCGGGTTTCAATCGGTAT
TTGGTTAAAGATTGGAATCAAGCTGGCTGTGATGAAACATAAAATTTCTGATTTGCAAAA
CTGGCTAGGTTTGCATAATGTCGACCATAAAGTTGTGTGCACATTGGTAGGTTTGCATAA
TGCCGACCATAAAGGCGGGTGCACAAACTTAAATTTGCAATGTTATTTTTCTCAATGAGT
GAGTAACCAGCGAACAAAAGTAATATTTTCGAATTGGGGCACAAAAACTTACGCTAATTG
TTGTAAATAGTAATTTTTAGTTGTGGATTATAGAAAATGAAGACGTCACTCTTTTTTTTT
CGGTGCGCGAACGAAGTGTTGCCATGTGACTTACAAACAACGTTGATTTATTTTTTTAAA
AATAAATGAAAATTCAATTGGAAAAAAAAAAAAAAAAA
(5558 bp)

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