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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27313_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cyclin-T-like_[Bombyx_mori]
Ontology
GO:0000278 P mitotic cell cycle
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006468 P protein phosphorylation
GO:0007015 P actin filament organization
GO:0007419 P ventral cord development
GO:0008023 C transcription elongation factor complex
GO:0008024 C cyclin/CDK positive transcription elongation factor complex
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0008360 P regulation of cell shape
GO:0009408 P response to heat
GO:0016538 F cyclin-dependent protein serine/threonine kinase regulator activity
GO:0019901 F protein kinase binding
GO:0032783 C super elongation complex
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:1901409 P positive regulation of phosphorylation of RNA polymerase II C-terminal domain
Transcript
Level		FPKM:5.44 TPM:4.58
ORF EntryO_TrvaMG18138_complete:A_TrvaMG_comp27313_c0_seq1
Sequence
(Nucleotide)
CGCTCCACTTTTGTAATTTTCTTTGAAAATCTTATGAAATGTCTGTGTTTGTTGCAGATC
ATCAATCTGTCACCGGAGATCTTACTGCGTTAACCACCAAGTTTTACAATGGCGTCAGCT
TGAAAATCCCTATCACGATTTTGTTTTGTGATGTAACTTAAAACATAGGTTTTTATTATT
TTGTTGTGTTTCAATAATTTCAAGTTATTTTTGAGTTAATTATTAGTGATTTATAATAGC
TTTTTCTTGTAAAATGATAAGTTTTTAGTTTATCAAGCACTCAAATGTTAACGTGGTCTT
TATCCGGTTGCCGCTGTGCTAGCGCTGTCCCTTTCCCACTCACGCACCTAGACGGAGCGC
TGCTATCCGTCGTGCTTTCTCGCGCGCAGTCAGAACATCCGTTCAATGGCTGGTGGGCAA
GAAAAATGGTATTTTACAAAAGAACAGCTACAGAATTCACCAAGCAGAAAATGCGGTTTA
GATGCAGATAAAGAATTAGCTTATCGGCAGCAGGCCGCGAATTTAATACAGGATATGGGA
CAGAGGCTTCAAGTCTCTCAATTATGTATCAACACGGCGATTGTGTACATGCATCGTTTC
TACGCGTTCCACTCGTTCACGCAGTTCCACAGGAATGCCATTGCAGCTGCAGCACTGTTT
CTGGCTGCGAAGGTGGAAGAGCAGCCAAGGAAATTGGAATATGTTATAAAAGTGGCCCAC
GTTTGCCTCCACAGAGGTGAGGGGGTCAACGCGCTCATCGGCGAACAATATCAGGAGCAG
GCCCAAGACCTAGTCTTCAACGAGAACGTTCTCCTACAGACGTTAGGTTTCGATGTAGCG
ATCGATCATCCGCACACACACGTCGTGAGAACATGTCACCTTGTCAAAGCGACGAAAGAC
TTGGCGCAAACATCGTATTTTATGGCTTCGAATAGTCTGCATTTGACGACGATGTGCCTC
CAATACAAACCGACCGTCGTTGCCTGTTTCTGTATACATTTAGCTTCGAAATGGAGCAAT
TGGGCTATCCCACAATCGTACGAGGGTCGCCATTGGTTCTCGTACGTAGACAAGACTGTT
ACTATGGAATTATTAGAAAAATTAACGGCAGAATTTCTACTTATATTCGAGAAATGCCCG
TCTAGGTTAAAAAGGAAAATGATGAATGTTAAAGCGGCCGATGGCAGTTCACCTTCGTTA
GGACAGCATGGCTCAGGACCGAACCAAGCGTCACCGTTTGACAAGAAACACGGTCACTCC
AGCTCAACTAGCGATGAAATAGATAAATCATTTGATAAAGAATACGAGCGTGAAAGGCGA
CGTCAGCCCGTCCCCGGTAGCTACGTGCCCGCCCCTTCAGCACCCACACAACCCCCACCA
CAGAAACTAGACTTCAACCAATACAGGGAGAAGAGAGAGAGGGAAGAACGAGAACGACGC
GAGGAGAGAGCGAGACAAGCGCACCAACAGCGAGCCAACCCCGCCCAGCGGCCAACACAG
CCCCCGCACCAACGGCCACACCACAAACCCCACCCGTGGCCGCCACAGAAACCCCAGCAG
AAGCCACACGACCACCGACACAGGCCCGTGCCGTCTACGTCGGCGGCGCCAGCACAGTCC
GTCCAAGAGGTGCCGCAGAGGACGCGACCGCCATCTTTGTTCTCGCCCGAGAGCGCGACC
ACGCCCACTGCGGCCGCTGCTGCCCCTCGCCGCCCGCAACCACCCGTACAACCGCACCCG
CAACCGCAACCGAGACCCAAACCAGAACCAAGGCACCCGCCTCTCGAGCGACCCCCCAGC
CCGAGAAAGAGGCCCGATGCCACAACAGCCATCAAGGAAATGCAACCGCCCGCCATTTTA
TCTCCGTTTTCGTCACCTCCGTCACTAGAAACTAAACCTAGACAGACGGTGCACTCGAAT
TCGGAACCGGAATTAGTGCCTGTAGTCAAGAAAATAGACGAAACGCCCGGCTACGAGAAT
ATTATTAAGGAAAATCAGAGGATAATGAAAAATAAAGTGCCGGAGAGAAAGCCTGAACCA
CCTCCTAGGGCCCTCAACGGCATCGAAACAGACCCCACACTAGTATCTAATCTATTAAAA
GAAAGTTTAGCGAAACCCGTTCCTATATCGGTGCCCACTGAAAAGAAATCGCCCGTAGAA
GTTAAAAGAGAGGTTGTGGAACCGCAACCGCCGCCCGTCCAGCCGCAACCGCAACCGGAG
CCGCAACCCGCCGACACCGACCAAAAACACAAGAAAGACAAAAAGAAAAAGGAGAAACAC
AAACACAAAGACCGCGACAAATCGAAAGAGGAGCGCAAAAAACATAAAAAAGACAAAGAC
AAGAAGAACAGTCCGCCGCAAGTTGACAACCAAGATGGCGCCTTAAGGATAACTATACCT
CGCGAGAAGCTATCCACGAGTCCCGGGCAAGGGTTGAAGATAAAGATACCTAAAGAAAGA
CTGGCCGCGCCTCCCCCGCCGCCGCAGCATCCCCAAGCCGGCCTCAAGATCAAGATATCA
AAGGAAGTGCTCGAAAGTTCCCGCAAGCGACCCGCCGAGGCAGGCCTGCAAGGACCCCCC
GGCCCGCCGAAGCTGCCGAGACACAACGGAGCACCCAAGGTCGTCGACTCGGCGATGGGG
AACGGGCACCACAAGTGACGTCACACGGTCCGGAAGCGACGTGTGTCGACGTTCCTCAGA
CAACAACTAACGGACCTCACTAGTGTATCGGGTTTTTTTTTTTGTTTAATATTTTCAGCG
GCTCGCGGTTTGCGAATTCGGAGCGCGTTGGCATGTTTGAATATAAACTACAGTGTAAAT
GTGATTGAAAATAGTTTGGAAGGTGGATTTGTAACTGAACAGCTGATTTGGGGTGAATGA
ACTATCTATATACAACTTAAAGCACTTTTGGGAGTCGTCTTTTTTCTGATATTGTATGGT
GTATGACTATCGTAGCGAACTCCCATATGATATTTGAAAAAAAAACAGGTTAACCGATAG
AAAAAGTAAAAATGGTTCAACACCACTTTAGCTGGTCCAAAGTTACAGATTCACACTGTA
CATGAATAGTAAATTGATGTGATCGAACAAACAAAGCAATAATATTGGTTGTGCGTTAGT
TTTGAAATTAAAACGTTTTCCGAATTTGTAAACTCTTGCTAGGCCTACTGGCCGTATGTG
GCGGGACACTTTGACCATAGTTACATTACGTTACATTTATATAAAACCAAATTTGGCTTA
AATCAATCCCTAGTAAGTAAACCTAGTAGTAAATCTAAAGTTTGAATTCGTTATTCCTAA
ATATCAGTTTATATTGCCAACAATTGGCGATTTACCCTAATAGGGTAACCGACCCAAATA
TTTTTAAAATTGTGATGTAATAAATAATAGATATCTTAATTTCATGGTTAATAATTGTAC
GTCTTATTTTATTTTTTCACTTCGATTATTTAAATGTTCAGATTTTAAAATGACAATGGT
AGAGGTCTTAGTTTCCTGCCTCGTACGTAGTTGTAACATTTTTACGTTGTCGGACTGCGC
GGTTTTGGCTCATTTGAATTTCAAATGTTCACGGCCTGACGCAACCAGTCGCTTGTCTGT
GCTTGTCACTGCCCGTCGTGACGTCGGACGGGTGTGGCGTCATTAAGGAGTTCATCCTGC
CGTTTGAATTTTGAAAGGTTTTGGCGTTTTTTAGACCTATAGATAGGATGCATAATAATT
ATTCAAATATGTAGAAGATGCTGACATTGGTTGTTTCACCCTAAAATAGGGTAAAGTGTA
CAGTTAAATATTAACATTAAAGAGAGAGAATTAATTAAACTCGATTTCTTAAATTGGTTT
CAGCTATTGTTTAATTTTCACCACATAGGATTGGATGCTACTGTATAGGCCTTTTAAAAT
TCGAACGGCATAATATCTGTGTACAAATTGTGAATATGTTATGTATGTACCAGTGATTTT
TATATATAGACTGATCTAATGGGAGCCAAAATCGTAACATAACTCGCGGTACCGTCGCCA
GCGAAATTACACACAAATTTGTTTCTCCCAATAATTTCGGTGGCGATCGTACAGGTGCGG
GGCTCACGATTTAATAGCAAATAACGGGTTTCGAAAACTATAAAAAAAAGTTTAAAAATG
AAAATAAACAAAAAATGTTGTAAATATATGCCGCTAGATGGCGGTTTGGACGCGAAATGT
CGCTAGATAATAATCGTGCCGTATTTCAAATTATGCTGGAGTATTTAAAGTCGTTTATCC
ATTTTTTGATATATCGTAAATGCTATAATAATATGCCTTACGGCTTTTGTATAAATATAT
AATGTTTATCCATATTCTGGCTTTAGTGAGGACTCTGATCGGGATTGTCAAAAATATAAA
CGACATTTTGAAACATGATATTGCAAATTTAAGTGTACACGTTAAAGTTATTTTGGGCCC
CACTGTTATGCCAAATGCTTAGCTGACTTCAAAGGAAACCATTAGGATATTTCAACTTAA
AAGATTGTACACGTAAATAACAGGTTTGGATCGCAAAATAAATTTTGAGTAAAAATGTCG
GCCTAACCCGCATTTGAGAATAAGAGCACTGTATTTGGGGCCCAAATTCGCCCCATTAAA
AATCGGGCCTAATTTCGTCCGAAGTAGATATCACGCTGATAAATAATTAAAAGTACTGTC
TCATGTAATTTATTTTCTGTGTAGTTCTTCAATTAATGTTTGATGTCTTTGATTTGAACA
GTTTTTACGAGAAAATATATGTTTTAAATTCTCGTAATTATTGTGCGTTTTTTCTGTGGA
CAGTACTCGGGTTTCAATCGGTATTTGGTTAAAGATTGGAATCAAGCTGGCTGTGATGAA
ACATAAAATTTCTGATTTGCAAAACTGGCTAGGTTTGCATAATGTCGACCATAAAGTTGT
GTGCACATTGGTAGGTTTGCATAATGCCGACCATAAAGGCGGGTGCACAAACTTAAATTT
GCAATGTTATTTTTCTCAATGAGTGAGTAACCAGCGAACAAAAGTAATATTTTCGAATTG
GGGCACAAAAACTTACGCTAATTGTTGTAAATAGTAATTTTTAGTTGTGGATTATAGAAA
ATGAAGACGTCACTCTTTTTTTTTCGGTGCGCGAACGAAGTGTTGCCATGTGACTTACAA
ACAACGTTGATTTATTTTTTTAAAAATAAATGAAAATTCAATTGGAAAAAAAAAAAAAAA
AA
(5222 bp)

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