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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27312_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000785 C chromatin
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006342 P heterochromatin assembly
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0032007 P negative regulation of TOR signaling
GO:0033522 P histone H2A ubiquitination
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0070728 F leucine binding
GO:0071233 P cellular response to leucine
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:1.30 TPM:1.09
ORF EntryO_TrvaMG18133_complete:A_TrvaMG_comp27312_c0_seq2
Sequence
(Nucleotide)
TTTTGTTTATTTTATTTTAAAAAGCGAAATTTGGACTCAAGGTTAATTGCAAATGTAAAT
GTTAAATTTGTCGAGGAGTCGATTGTTTAACTGTGTTCATATTTAAATGGTTTTTTTCGA
AATCCCTCAATAAAAAATATCAAAATCATTGTTGATCATACTTCATTGTGCTGAAGTGAA
ATGTCAAAATTTTCGTGGATTAGTGCCAGAGAAAATTCGATTTAATGAAAGTTGTGAACA
ATATAACCAAGAACATAAATTTTACCAACATTTACATTTTATCATTACAACACATTAATG
CGAAGTTATTATTGGATGATTCTGCATAATTTGCGCTGAAGGGTGTATATTGATGCAAAG
CAGATATGAGTACTCCACCGTCGGTGCAGCTGGAGGTGGAAGTCGGTGATGGCACTATGG
ATGATGAAACCCATGACATGATACCTGCTGACAGGTATACATTACCAGCCCGAGCTGACG
CTGTGGTGGAACTATGGCGGAAGAACTTACAAGAGGGTTCGCTTGCACCTTCACACTTCC
AAGATCATTGGCGCGTTACAGTTCCAAGGATATATTCGCCACAACCAAACCGGACATGTT
TAGAATGGTCTTTCGACGAGGAACTGGCAGCCAAGTTACTGATCCAACCCCTAGAACAGT
TCATCTGGGGTACACCCGAGGGTTCTCAGCCGGGACCTCCCCGTCGGTCCACACTCTGCG
GCCGAGTGTTCAAGTCCGGCGAACCTGCCTACAGCTGCAGAGAATGCGGTATGGATAACA
CTTGTGTTTTGTGCGTGGAGTGTTTCAAGGTGTCGGCTCACAGACATCATAAGTATAAGA
TGGGGCAGTCAGGGGGCGGGGGGTGTTGTGACTGTGGCGACACTGAGGCCTGGAAACGAG
ATCCATTCTGTGAATTACATGCTGCACCAAGTGACCAGCCTCCCGAAGCCGGCATCAGCG
AGGACGTGATCAAGAGAATGAAGATCGTAGCGTCCGCCTGTCTCACGTACTGCCTGCGAC
TGTTGACGCACGACCACGCTCCTTGCTTGCCCAATGATCTCAGACTTAAAGACACAGAAC
ACGATATAATGCAAATACTTGATCAACCCGACTGCTACTGCACGGTGCTTTATAATGACG
AAACGCATACTTTTGAACAGGTTATAACAACGTTGATACGTGTAACGAAATGCAATCATC
GCGACTCCGTGGAGCTCGTCAGCCTCATCGACCGCGAGGGACGCGCGCTCATCAAGTGCA
ACTCCTTCCAGATATGCGATAAACTCAAAACTGATATTGAGATCTGCACGGCGATGTTCG
AAAGGTTCACGGCGCGCCAGAGCTCCACGCTGAAGGTGCTCGTCATGCACGCGCACGTCA
TCGCGCACCAGACCTTCGCCATGAAGCTGCTCACCTGGTTACAAAACTTCGTGAGCCAAG
AGCAAAGTCTCCGCATGGCCGTGTCAGTAGTGGCTCTGGGCGAGGAGTCCTGGGGCTCCA
GCTCGGCGGTGGGCGGAGGCGGGGTCGCGGCCGGCGTCATGCAGAACGACTTCCGCATGT
GGAAGGCCGCGCGCACCGCCTGGCATCGACTGCTCATAGCCACCACGCTCATGGACTACT
CTACTAAGAGGACCATGGCTATATTGTTCACTAAGAATTATGGTTCAATTCTGAAGGACT
TCATCCGAGACGACCACGATCATTCGTTTTCGATATCGTCTCTATCGGTCCAGCTGTACA
CAACGCCGACGCTCGCTCACCTGCTGATCGCGAAGCACGACGCTCTGTTCGTCGTGCTCA
ACACGTTCGTCAGCGAGTGTAACCGACGTTGTAATAATGGTCGTTTGGAATTCGACCGTA
ATCACATATCGGCAGCGTACAAGCGCGCACAGTTCGTGTTGTTCGACGTGAAGTACTTGT
TGGGGTCCGTGCCGCAGACCTTCGACGATGACCTCCGGAAGGGGTTCCTTCACGGCCTGT
CTCTGCTGCTCAACCTCTTCGTCATGATGCAGGGAATGGACTCTGTTGTTAGACAGGTCG
GGCAGCACATGGAATACGAGCCGGAGTGGGAGTCCGCGTTCAACCTGCACTTGAAGCTGT
CACCCTCCATCAGCATGTCGCTCGAGTGGTGCGCCTCCGAGCGAGCGCTGACCGCGTCCG
CCTACCGCATGGCGCTGCGACGACACGCCGCCGCCACTGAACACGCACCCAGAGTACTTA
AAGAATTGGGCAATCAGAGTGCGTCAGTGATCCCGTACGACGTGTCGGTGGAGCCCGTGT
CGATCCACCGGCCGCTGTCGCGCTACATCGCGGGGCTGCACCTGCTGCTGCACCGGCACG
GGCTCTCCTACCACAGCCCCGAGTTCGACAGGCAGGACAAACAGAAGCCTACGCCTGAGG
AACTTATTGAACCAGTGTTACAGACAATGGCCATGATAGCTCAGGTGCACGCCGGCATGT
GGCGCAGGAATGGATTCGCGTTACTCAATCAACTGTACTTCTATCACAACGTCAAGTGTC
GCACTGAGATGTTGGACAGAGATGTTGTTATGTTGCAAATCGGCGCATCTTTAATTGAGA
GCAACGAGTTCATAATTCACGTGCTGAACAAGTTTAACTTGTTGGACTGGGCGTCTCCTG
AGTTTGAAAACCAAAGCATTGAAGACGACACGCTGAGGCATACTATTAGCATGGTTGAGG
AGTTCCTCGGATTACTTATCACTGTTGTGGGATCCCGGCATGTTCCTGGTGTGGGTGAAG
TGACAAGTGAAGATCGAATCAAGAAGGAGATCATACAAATGCTTTGTGTTAAGCCCATGC
CGCACTCAGAACTTAATAGATGTTTACCAGAAGATCAACTCCACGAGACGGGCTTAGAGT
CTGTTATCAACGAGGTGGCGGACTTCGTGAAACCGACGAGCGGCACCAACCGTGGGCTCT
ACAAACTGAAGCCGCATCTGTACGATGAATACGACACGTTCTTCTATCATTACACGAGGG
AAGAACTTTCTAGAAGCGAAGAAGAACAGAGAAATAGGAGGAAGACTGCTGGTCTGTCGG
AGTGCTGCCCCCCGCCGGCGCTGCCCCGGCTGACGGCGCCGCTGTCGCTGCTCGCCAACC
TGCTGCAGAGCGAGGCGGCGCTGCACGTCCTGCGCACGGTGCTGCAGCGGGCGCTCGACC
TGCGCGCGCGGTCCTTCTCCGAGACGCAGGTGCACAAGGCGTTACACCTGATAGGGTACG
CGATCCGCGACGAGGAGAGCGGCCACTACGAGTTCGTCGCGTTCGCGGAGAGCGCCGCGC
GCTGCGGGCTGGTCGCGCTGCTCAAGCAGCTCGTCAACAGTCCCCGCGTCGACGCGCACA
GGCATCTCGCTAAGTGGGTGCTCGCTAGGATCAAGACTTTGCTGGGTGAAACAGATGACC
AGGATGAACAAAAAATGGAGACTGACCAAGAAGAAAAACCAAACTCGACAGAAGCAGAAG
CAGAAAAGGAACGTCGTGCGAAGTTAGCAGCCGAACGCAGGGCTAAAGTAATGGCGCAGA
TGAAAACACAAATGAACAATTTTATATCGAACAACGCTACGTTATTTGAAGAAACTAATA
CGGAGGTGACGGCGGAGGAGCAGGATCTGCGCCCGCTGTACTGCGGCGCGGCGCTCGGCG
TGTGGGGGGGAGGCGTGCCCGAGCCGCCGCGAGTCTGTATCATGTGTCAGGAAGAGGCCC
GAGTAGAAGCGACAGGCGAGCCGCTGGTCCTGGTAGCGTTCGTGCAACAGTCCGGCGTGC
TGAGCCGCGCGCGCGACGCCGGCGACACGGAGCGCGGGCGCGAGGCGTGGCTGCCCGCCG
GCGTGAGGCCGCAGCCGCACGTGTCCAGCTGCGGACACGCCCTGCACGCGCACTGCTGCA
GGAACTATGTCAACGCGGTGCTGGAGAAGGAGAACCGGAGACCATACCGCGGCCGACAAC
CTGCCGCTTTCGACGTAGAAAAGAAGGAATACCTCTGTCCTCTTTGTGAGCGACTGTGTA
ACACCGCTCTACCCCTCCTACCCAGCCCCGCCCTACCCGTGGGGAGCCCGCCCCCTCTTA
CCGAAGACATGTACAACCAAGCCGTCAGTCTAATCCTCAAGCTCAAACATCAAGTCAGTT
CAGAGTCAGTCCACGTGTGCACAGAGTTCTGCGAGGAGATGCACTGTCAAGCCAGGGCGA
GGAGTGTGGGAGCCATGTCTTCCGATATGGAGGAGGAGTCTGCTGATGAGGCAGAAGTGT
ATGTCTCTACTCATTCCGAGAACCTACTGGCTCCCGAGTTTTTGGTGCACTTTGAAACCG
AAGTGCCTCAGTATAATAGTACTACGAAGAAGTTGATTGAAGAGTTTGCTACTGTGTTAC
CGGCGACAGAAACGGGCGGCATGGCGTCGACGGCGGCGCTGTACCGAGCCACCTCGTACA
CCATCATGAGCACCAACGTGATCCTGCAGGCGGAGAACCGGCCGCTGCTGGTGGAGATCC
CGTCCCGCCTCCGCGACGCGCTGCAGGCCCTCATCCGCATGGCGGCCGCCGTGCCCGCGC
TCTGGGCCGCGCCCAAGCACCTCGCGCACCACGCGCTCAGCACGCTCAACACGCTCGAGT
GCTCCTCGCCGCTCGCGCACGACCCCTTCGGCACCCTGGTCGCGCTCGTGCTCTCCGCGC
CCGCCTTGTTCTGCAAGGTGGCCGGCCCCGCCAGACCCACGCATCTAGCGCGACAGATCA
CTCTGCAAGCCTTCCGAGCCAGTCTAGTCAAGGCCCTCATAGTGATAGACTTGTCGGCGT
GCAAAACTGAGGCCATGGAGGGACACGAAGAGTACGCGGTCAAACCGGACTTGGAGAACT
TACTGTCTGTACTCAAAGAAATGAGACGCGGCGATTTACAGGACGACCTGGACCCTAACA
AAGTTTGGGAGGAAATCAAGAAACAGTGTCATTCATTTTTAAGATGTTGCTGTTTATTCT
ATTATTTCTTAAGTGATATAAACCCGCCCACAGAATTGACGCAAGTGGGCGGTGACAAAT
GGGACATTATGTGCGGATATCTTGATTTACCTTTAACATTCAAAGAGTTGATAGACAATC
CCGTTGCCAATAAAAAGGCTTTAGAATGGGTGGCGATGTCGGACGCTTGGTTTAAGGGTG
AGATTCAACCGAGTGTTGTGTTAGAACCGAGTGAGCCCCCTAAACTAGTGCCTTTACCGG
AAGACTTCTCGGAGCTCATGAACATAGCGTCAGACTTCCCGTGCCCCAACTCGGACCGCG
AGGACAGCAAGAACCCGACCATGTGCCTCGTGTGCGGACAGATACTGTGCTCGCAGAGCT
ATTGTTGTCAAGCGGAAATTCCAAAGAATCGTAGCGGCGCTACGGAGCGTGTCGGCGCGG
TGGTGGCGCACGCACTGGAGTGCGGTCGCGGCGCCGGCGTGTTCCTGCGGGTGCGCACGT
GCGAACTGCTGCTCGTGGCCGCTCCCTCGCGCGGAGCCAAGATGGCCGCGCCTTACCTCG
ACACCTACGGCGAGACTGATCAGGGTCTGACTCGCGGCAACCCGCTGCACCTGTGCCCCG
CGCGCTACGAGGCGCTGCGCATCCTGTGGCTGAGTCACGGCGTGCACGAGCGCATCGCGC
GCGCGCTCGACACCAACATGCTAGTCATCACCACCTGGCAGAACTTCTGATTAAGTGTCT
TGTAATGCGAGCATGCGACAATATTACACGAACACTATAACACACCTATCATCTGTTTGG
ACCGCTTTAGATGATGATTGTTGCGAATGCGTGCATTGCGGCTCGATCTGTAAATGCGTG
CGTAAAGCTTACTTTTCATAATTTTAGTGATGAAATTTAAAACGTATAGGTGCTTCGGTA
ATATTGTCATATGCATTTTTTTTATGATTAAGTCAAATATTATGTACCTTAAAACCTAGC
TATTTTGACCATATTTTGAAATTACAAAAACGGTGACTGTTTAGTCAAGTTTTTACTACC
GGCTATAACTTATTTCAAAAATGTCCTTCCAATTTTAGCACTTTAGATGCTGTTAGAAAC
ATGCAGTTTCGTATTTTGTGTATAAA
(6086 bp)

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