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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27312_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000785 C chromatin
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006342 P heterochromatin assembly
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007141 P male meiosis I
GO:0007283 P spermatogenesis
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0032007 P negative regulation of TOR signaling
GO:0033522 P histone H2A ubiquitination
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0070728 F leucine binding
GO:0071233 P cellular response to leucine
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:6.86 TPM:5.77
ORF EntryO_TrvaMG18128_complete:A_TrvaMG_comp27312_c0_seq1
Sequence
(Nucleotide)
TTTTGTTTATTTTATTTTAAAAAGCGAAATTTGGACTCAAGGTTAATTGCAAATGTAAAT
GTTAAATTTGTCGAGGAGTCGATTGTTTAACTGTGTTCATATTTAAATGGTTTTTTTCGA
AATCCCTCAATAAAAAATATCAAAATCATTGTTGATCATACTTCATTGTGCTGAAGTGAA
ATGTCAAAATTTTCGTGGATTAGTGCCAGAGAAAATTCGATTTAATGAAAGTTGTGAACA
ATATAACCAAGAACATAAATTTTACCAACATTTACATTTTATCATTACAACACATTAATG
CGAAGTTATTATTGGATGATTCTGCATAATTTGCGCTGAAGGGTGTATATTGATGCAAAG
CAGATATGAGTACTCCACCGTCGGTGCAGCTGGAGGTGGAAGTCGGTGATGGCACTATGG
ATGATGAAACCCATGACATGATACCTGCTGACAGGTATACATTACCAGCCCGAGCTGACG
CTGTGGTGGAACTATGGCGGAAGAACTTACAAGAGGGTTCGCTTGCACCTTCACACTTCC
AAGATCATTGGCGCGTTACAGTTCCAAGGATATATTCGCCACAACCAAACCGGACATGTT
TAGAATGGTCTTTCGACGAGGAACTGGCAGCCAAGTTACTGATCCAACCCCTAGAACAGT
TCATCTGGGGTACACCCGAGGGTTCTCAGCCGGGACCTCCCCGTCGGTCCACACTCTGCG
GCCGAGTGTTCAAGTCCGGCGAACCTGCCTACAGCTGCAGAGAATGCGGTATGGATAACA
CTTGTGTTTTGTGCGTGGAGTGTTTCAAGGTGTCGGCTCACAGACATCATAAGTATAAGA
TGGGGCAGTCAGGGGGCGGGGGGTGTTGTGACTGTGGCGACACTGAGGCCTGGAAACGAG
ATCCATTCTGTGAATTACATGCTGCACCAAGTGACCAGCCTCCCGAAGCCGGCATCAGCG
AGGACGTGATCAAGAGAATGAAGATCGTAGCGTCCGCCTGTCTCACGTACTGCCTGCGAC
TGTTGACGCACGACCACGCTCCTTGCTTGCCCAATGATCTCAGACTTAAAGACACAGAAC
ACGATATAATGCAAATACTTGATCAACCCGACTGCTACTGCACGGTGCTTTATAATGACG
AAACGCATACTTTTGAACAGGTTATAACAACGTTGATACGTGTAACGAAATGCAATCATC
GCGACTCCGTGGAGCTCGTCAGCCTCATCGACCGCGAGGGACGCGCGCTCATCAAGTGCA
ACTCCTTCCAGATATGCGATAAACTCAAAACTGATATTGAGATGTTCACGGCGCGCCAGA
GCTCCACGCTGAAGGTGCTCGTCATGCACGCGCACGTCATCGCGCACCAGACCTTCGCCA
TGAAGCTGCTCACCTGGTTACAAAACTTCGTGAGCCAAGAGCAAAGTCTCCGCATGGCCG
TGTCAGTAGTGGCTCTGGGCGAGGAGTCCTGGGGCTCCAGCTCGGCGGTGGGCGGAGGCG
GGGTCGCGGCCGGCGTCATGCAGAACGACTTCCGCATGTGGAAGGCCGCGCGCACCGCCT
GGCATCGACTGCTCATAGCCACCACGCTCATGGACTACTCTACTAAGAGGACCATGGCTA
TATTGTTCACTAAGAATTATGGTTCAATTCTGAAGGACTTCATCCGAGACGACCACGATC
ATTCGTTTTCGATATCGTCTCTATCGGTCCAGCTGTACACAACGCCGACGCTCGCTCACC
TGCTGATCGCGAAGCACGACGCTCTGTTCGTCGTGCTCAACACGTTCGTCAGCGAGTGTA
ACCGACGTTGTAATAATGGTCGTTTGGAATTCGACCGTAATCACATATCGGCAGCGTACA
AGCGCGCACAGTTCGTGTTGTTCGACGTGAAGTACTTGTTGGGGTCCGTGCCGCAGACCT
TCGACGATGACCTCCGGAAGGGGTTCCTTCACGGCCTGTCTCTGCTGCTCAACCTCTTCG
TCATGATGCAGGGAATGGACTCTGTTGTTAGACAGGTCGGGCAGCACATGGAATACGAGC
CGGAGTGGGAGTCCGCGTTCAACCTGCACTTGAAGCTGTCACCCTCCATCAGCATGTCGC
TCGAGTGGTGCGCCTCCGAGCGAGCGCTGACCGCGTCCGCCTACCGCATGGCGCTGCGAC
GACACGCCGCCGCCACTGAACACGCACCCAGAGTACTTAAAGAATTGGGCAATCAGAGTG
CGTCAGTGATCCCGTACGACGTGTCGGTGGAGCCCGTGTCGATCCACCGGCCGCTGTCGC
GCTACATCGCGGGGCTGCACCTGCTGCTGCACCGGCACGGGCTCTCCTACCACAGCCCCG
AGTTCGACAGGCAGGACAAACAGAAGCCTACGCCTGAGGAACTTATTGAACCAGTGTTAC
AGACAATGGCCATGATAGCTCAGGTGCACGCCGGCATGTGGCGCAGGAATGGATTCGCGT
TACTCAATCAACTGTACTTCTATCACAACGTCAAGTGTCGCACTGAGATGTTGGACAGAG
ATGTTGTTATGTTGCAAATCGGCGCATCTTTAATTGAGAGCAACGAGTTCATAATTCACG
TGCTGAACAAGTTTAACTTGTTGGACTGGGCGTCTCCTGAGTTTGAAAACCAAAGCATTG
AAGACGACACGCTGAGGCATACTATTAGCATGGTTGAGGAGTTCCTCGGATTACTTATCA
CTGTTGTGGGATCCCGGCATGTTCCTGGTGTGGGTGAAGTGACAAGTGAAGATCGAATCA
AGAAGGAGATCATACAAATGCTTTGTGTTAAGCCCATGCCGCACTCAGAACTTAATAGAT
GTTTACCAGAAGATCAACTCCACGAGACGGGCTTAGAGTCTGTTATCAACGAGGTGGCGG
ACTTCGTGAAACCGACGAGCGGCACCAACCGTGGGCTCTACAAACTGAAGCCGCATCTGT
ACGATGAATACGACACGTTCTTCTATCATTACACGAGGGAAGAACTTTCTAGAAGCGAAG
AAGAACAGAGAAATAGGAGGAAGACTGCTGGTCTGTCGGAGTGCTGCCCCCCGCCGGCGC
TGCCCCGGCTGACGGCGCCGCTGTCGCTGCTCGCCAACCTGCTGCAGAGCGAGGCGGCGC
TGCACGTCCTGCGCACGGTGCTGCAGCGGGCGCTCGACCTGCGCGCGCGGTCCTTCTCCG
AGACGCAGGTGCACAAGGCGTTACACCTGATAGGGTACGCGATCCGCGACGAGGAGAGCG
GCCACTACGAGTTCGTCGCGTTCGCGGAGAGCGCCGCGCGCTGCGGGCTGGTCGCGCTGC
TCAAGCAGCTCGTCAACAGTCCCCGCGTCGACGCGCACAGGCATCTCGCTAAGTGGGTGC
TCGCTAGGATCAAGACTTTGCTGGGTGAAACAGATGACCAGGATGAACAAAAAATGGAGA
CTGACCAAGAAGAAAAACCAAACTCGACAGAAGCAGAAGCAGAAAAGGAACGTCGTGCGA
AGTTAGCAGCCGAACGCAGGGCTAAAGTAATGGCGCAGATGAAAACACAAATGAACAATT
TTATATCGAACAACGCTACGTTATTTGAAGAAACTAATACGGAGGTGACGGCGGAGGAGC
AGGATCTGCGCCCGCTGTACTGCGGCGCGGCGCTCGGCGTGTGGGGGGGAGGCGTGCCCG
AGCCGCCGCGAGTCTGTATCATGTGTCAGGAAGAGGCCCGAGTAGAAGCGACAGGCGAGC
CGCTGGTCCTGGTAGCGTTCGTGCAACAGTCCGGCGTGCTGAGCCGCGCGCGCGACGCCG
GCGACACGGAGCGCGGGCGCGAGGCGTGGCTGCCCGCCGGCGTGAGGCCGCAGCCGCACG
TGTCCAGCTGCGGACACGCCCTGCACGCGCACTGCTGCAGGAACTATGTCAACGCGGTGC
TGGAGAAGGAGAACCGGAGACCATACCGCGGCCGACAACCTGCCGCTTTCGACGTAGAAA
AGAAGGAATACCTCTGTCCTCTTTGTGAGCGACTGTGTAACACCGCTCTACCCCTCCTAC
CCAGCCCCGCCCTACCCGTGGGGAGCCCGCCCCCTCTTACCGAAGACATGTACAACCAAG
CCGTCAGTCTAATCCTCAAGCTCAAACATCAAGTCAGTTCAGAGTCAGTCCACGTGTGCA
CAGAGTTCTGCGAGGAGATGCACTGTCAAGCCAGGGCGAGGAGTGTGGGAGCCATGTCTT
CCGATATGGAGGAGGAGTCTGCTGATGAGGCAGAAGTGTATGTCTCTACTCATTCCGAGA
ACCTACTGGCTCCCGAGTTTTTGGTGCACTTTGAAACCGAAGTGCCTCAGTATAATAGTA
CTACGAAGAAGTTGATTGAAGAGTTTGCTACTGTGTTACCGGCGACAGAAACGGGCGGCA
TGGCGTCGACGGCGGCGCTGTACCGAGCCACCTCGTACACCATCATGAGCACCAACGTGA
TCCTGCAGGCGGAGAACCGGCCGCTGCTGGTGGAGATCCCGTCCCGCCTCCGCGACGCGC
TGCAGGCCCTCATCCGCATGGCGGCCGCCGTGCCCGCGCTCTGGGCCGCGCCCAAGCACC
TCGCGCACCACGCGCTCAGCACGCTCAACACGCTCGAGTGCTCCTCGCCGCTCGCGCACG
ACCCCTTCGGCACCCTGGTCGCGCTCGTGCTCTCCGCGCCCGCCTTGTTCTGCAAGGTGG
CCGGCCCCGCCAGACCCACGCATCTAGCGCGACAGATCACTCTGCAAGCCTTCCGAGCCA
GTCTAGTCAAGGCCCTCATAGTGATAGACTTGTCGGCGTGCAAAACTGAGGCCATGGAGG
GACACGAAGAGTACGCGGTCAAACCGGACTTGGAGAACTTACTGTCTGTACTCAAAGAAA
TGAGACGCGGCGATTTACAGGACGACCTGGACCCTAACAAAGTTTGGGAGGAAATCAAGA
AACAGTGTCATTCATTTTTAAGATGTTGCTGTTTATTCTATTATTTCTTAAGTGATATAA
ACCCGCCCACAGAATTGACGCAAGTGGGCGGTGACAAATGGGACATTATGTGCGGATATC
TTGATTTACCTTTAACATTCAAAGAGTTGATAGACAATCCCGTTGCCAATAAAAAGGCTT
TAGAATGGGTGGCGATGTCGGACGCTTGGTTTAAGGGTGAGATTCAACCGAGTGTTGTGT
TAGAACCGAGTGAGCCCCCTAAACTAGTGCCTTTACCGGAAGACTTCTCGGAGCTCATGA
ACATAGCGTCAGACTTCCCGTGCCCCAACTCGGACCGCGAGGACAGCAAGAACCCGACCA
TGTGCCTCGTGTGCGGACAGATACTGTGCTCGCAGAGCTATTGTTGTCAAGCGGAAATTC
CAAAGAATCGTAGCGGCGCTACGGAGCGTGTCGGCGCGGTGGTGGCGCACGCACTGGAGT
GCGGTCGCGGCGCCGGCGTGTTCCTGCGGGTGCGCACGTGCGAACTGCTGCTCGTGGCCG
CTCCCTCGCGCGGAGCCAAGATGGCCGCGCCTTACCTCGACACCTACGGCGAGACTGATC
AGGGTCTGACTCGCGGCAACCCGCTGCACCTGTGCCCCGCGCGCTACGAGGCGCTGCGCA
TCCTGTGGCTGAGTCACGGCGTGCACGAGCGCATCGCGCGCGCGCTCGACACCAACATGC
TAGTCATCACCACCTGGCAGAACTTCTGATTAAGTGTCTTGTAATGCGAGCATGCGACAA
TATTACACGAACACTATAACACACCTATCATCTGTTTGGACCGCTTTAGATGATGATTGT
TGCGAATGCGTGCATTGCGGCTCGATCTGTAAATGCGTGCGTAAAGCTTACTTTTCATAA
TTTTAGTGATGAAATTTAAAACGTATAGGTGCTTCGGTAATATTGTCATATGCATTTTTT
TTATGATTAAGTCAAATATTATGTACCTTAAAACCTAGCTATTTTGACCATATTTTGAAA
TTACAAAAACGGTGACTGTTTAGTCAAGTTTTTACTACCGGCTATAACTTATTTCAAAAA
TGTCCTTCCAATTTTAGCACTTTAGATGCTGTTAGAAACATGCAGTTTCGTATTTTGTGT
ATAAA
(6065 bp)

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