SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27310_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_dystrophin,_isoform_B-like_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0007274 P neuromuscular synaptic transmission
GO:0007474 P imaginal disc-derived wing vein specification
GO:0008092 F cytoskeletal protein binding
GO:0008270 F zinc ion binding
GO:0008307 F structural constituent of muscle
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016020 C membrane
GO:0030010 P establishment of cell polarity
GO:0042383 C sarcolemma
GO:0045202 C synapse
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0046928 P regulation of neurotransmitter secretion
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0050699 F WW domain binding
Transcript
Level		FPKM:11.14 TPM:9.38
ORF EntryO_TrvaMG18109_5prime_partial:A_TrvaMG_comp27310_c0_seq1
Sequence
(Nucleotide)
GGAGAGCCTGATGGAGAGACGGGCCGGGGCGGAGCGCGCCGCCGCCGTGCGACACGCCGT
GCGCGAGCTGCTGCATGACACTACGGCCAACCCCTCCGACGCGACCAGTCTCTCCATCAG
GCTCTCCCTCGTCAAGGCTCGGTCTGAGGAGCTGGCGGCTCGACTACACGAGATGGAGCC
GCGACCCGAACACAACAACGAACAACGAGACCTCTACAACGAACTGCAGCAGTCTCAGGC
GAGTCTGTCAGCGCACCGCGAGTTCATATCCCGCAAGCTGTCCGCCGTACACAAGTACAG
CGCACAGCTCGATGACGTCACGCGCTGGGTGCAGCACGCGCGCACGCAGCTCACCGCCGC
TGACGTCACACCACAGCTCCGGACCGATATCGCTGACGAGGTCCGCGAGCGCGAGGGTCT
GTACCGCGAGGTGGTGGAGAACTACAAGAACCTGGAGCGGGAGTGCGAGGGAGCCGCGCA
GCCGGTGTGCGCCGACCTCACCAGGAGAGTGCACGCACTGGGGGCCGCCTGGACGCACCT
GCTCGCACTCACGCAGCCTCGCGAGCACGTGACGCACGCACACCACGCCAACGAGTGGAG
TGGTCGTCAGTCCGGACGGCGTCGTTCCTCCCAGCAGTCTCCAGCTGGACTCATCGCAGA
CTTCGACACCACAGTGCAACAGATCCGGGACTGGGTGTCGGTGGAGGTGGACATGCTGCG
AGCCCAGTCCGTGGCTGTGGGAGATGTCGATGAGATACTGCAACAACTCGACAAACAAAA
GGGTGTACTCCGAGAGCTGGAGCAGAAGAAACCTCAGCTGGACGAGCTCCTCCACACGGC
GGAGAGCCTCAAGGGCACGGAGAACAGACAACAGCTCCACGGAAAAGTGACAGCCCTACG
CGAGCACTGGGATGAAGCCAACACAAGGGTCCTTCAACGGAAGGCCCAGCTGGATGCCAT
GCTGGGTGACTCCCAGCGGTACGAGGCCAGGAGACGCGAGGCTGATGCGTGGCTCACGAG
GATGGAAACTCGGCTGGGAGCCATGCCTGCTCCAGGACATACAGCTGATGTGCTGGAGAT
GCAATTGAGGGAACAAAAGTCTTTCCACGCCGAAGTCCATCAGTACAAACACCAGATCGA
GCTGTTCAACCAGCAGACACAGAGGCTGATAGCGGTCTACCGCAATGATGACACCTCTCG
CATCAAGCGTTCCACCGAAGCCATCAACCATAGATACAACGAACTGAATAATAACATCGT
GGCTCGAGGCAAATCGCTTCATTCAGCGGTATCATCGCTGCAGAACTTCGATCGTTCACT
GGAGAACTTCGTCGCTTGGCTGAGTGAAGCTGAGTCTTTGCTGGACAGCGCTGAAAGGGA
TCCTCATCTGTTAAAGGATCTTCAATCAGAGATAGAAACCCACAGGAATGTGTACGCGTC
TCTCACGGGCACCGGCCGTCGTCTGCTGGGCAGTCTCTCCTCCCAGGAAGATGCGGTCAT
GCTTCAGAGGAGACTGGATGAGATGAACCAGCGATGGCATCATTTGAAGGCCAAGAGTAT
GGCTATCAGGAACCGCCTTGAAAGCAACGCTGAGCATTGGTCCGCGTTACTCCTGTCACT
TCGAGAGCTGACTGAGTGGGTGATCAGGAAAGAAACCGAGCTGAACGCTTTGGCGCCTCC
GAGGGGAGACCTCACAGCTTTATTGAAACAACAGGATGACCACCGCGCGTTCAGACGGCA
GCTTGAAGACAAACGTCCTGTGGTTGAGAGCAACCTCCTCAGCGGGAGACAGTACATCGC
CAATGAACCTCCTCTATCAGACACCAGTGACACTGAACCATCCCGTGACAGCGAGGGTGA
CTCCCGCGGCTACCGATCAGCCGAAGAACAGGCCAGGGAGCTGGCCAGATCCATCAGACG
GGAGGTTGCGAAGTTGGCTGACAAGTGGAACACCTTGGTGGACAGGAGCGATGCTTGGGG
ACGGTGCTTGGATGATGCTGTGCAGCGCGTCAGAGCCTTCACAAACTCTCTGGACGAGTT
AGCCAGCCGAGTACAAGCCGCCGAAGCAGCCAGGTCATCATGGCGAGGACCTGGAGACGC
AAGGGACGCCCGAGCTCAGCTGGATGCCGTCTCGAGAGCCCGCGCTCAACTACCACCTTT
GAGGAGACTGGCTGACGAGCTACATAGCCAGGCGCAAACCTTGACGAGGGATAAGATACA
GCTGCCTGATAATCTACTGGCCAAGTTGGATGATTTGAATACCAGGGTTGGTGCCCTCTG
CGCTGGCGGTGAGGAGAGAGCTCGTCAGTTGGCTGGAGTGGCTCGTGATGGAGGCGCCGG
TGCAGCCCAGGGCTTCCTGGCAGGGTCAGTGGATCCGCCATGGGAGCGAGCAGTCACGCC
TGCTAATGTACCTTATTATATTAATCATGAACTGGAAACGACCCACTGGGACCACCCGAA
GATGATCGAGCTGATGAACTCGCTGGCTGACCTCAACGAGGTTCGGTTCTCGGCGTACAG
AACCGCGCTCAAACTCAGGACGGTGCAGAAGGCTTTATGCATGCACATGCTACAGCTCCC
GGCTGCGCTCGAGGCGTTCGATTCTCACGGGCTTCGGGCTCAAAACGACAGACTTATAGA
CATTCCCGATATGATTACTGTACTCACCACACTTTACGAGGTGATAGCAGCCGAGAACCC
GAGCGCAGTGAACGTGCCGCTCTGCCTGGATCTGTCCATGAACTGGCTCCTCAACGTGTA
CGACTCGCAGCGCACCGGACAGATCCGGGTGCTGAGCTTCAAGGTGGGGCTCGTGTTGCT
GTGTAAAGGACATCTGGAGGAGAAGTATCGGTATTTGTTCCGTTTAATCGCGGACCCGTC
ATGCAGAGTTGATCAAAGGAAGCTGGGACTCTTGTTGCACGATTGTATACAGGTGCCAAG
ACAATTGGGTGAAGTGGCAGCTTTCGGTGGATCTAATATCGAACCGTCAGTGAGGAGCTG
CTTCGAGCAGGCGTCTACCGCCACCAAGGAGGGCAGCAAGGGTGGAACTCTGGACAGGAA
GACAGAGAAAGACAAAGAAGAGCCAAAAGAGAAGGCAGTGGAACGCGACGCCGAGGGTCA
GGTCCAGCACATCGAAGCCTTCCAGTTCCTGCAGTGGTTACAACGGGAGCCGCAGAGCAT
GGTGTGGCTGCCCGTGCTGCACCGCCTCGCCGCGGCCGAGGGCGCCCGCCACCAGGCCAA
GTGCAACATATGCAAGGACTACCCTATTGTAGGGTTCAGATACCGATGCCTAAAATGCTT
CAACTTCGACATGTGCCAGAAATGTTTCTTCAACGGTCGCAAAGCCAAGAACCACAAACT
GACGCATCCCATGCAGGAATACTGTACTGCGACGACATCAGGCGAGGATGTCCGTGACTT
CACTCGCGCTCTCCGCAACAAGTTCAAGTCGGCGCGATACTTCAAGAAACATCCGCGAGT
CGGATACCTGCCCGTACAAACTGTATTGGAAGGTGACGCCCTGGAGTCTCCGGCTCCGTC
TCCTCAGCACGGCGCGGCGCTCGGACCCGACATGCACTCGCGCCTGGAGCTGTACGCCAC
CAGGCTCGCGCAGGTGGAACTCAGCGCGGCCGATACGCCTGACAGCGACGAAGAACATCA
GCTGATAGCCCAGTACTGCGCGTCGCTGAACGGAGGGGCGGAGTCCGAGGAGGCTCCGCG
CTCGCCCGTGCAGGTCGTCTCCATCATACACCGCGAGCAGAGGCACGAACTGGAGGCCAT
GATCAGAGAGTTGGAAGAAGAGAACGCCAGTCTCCAGGCGGAGTACGAGCGACTGAAGGC
CAAGCAGACCCCGGGCTCCACGCCCGAGGAACAACACGCCGACAACAGGAGCGGACCCGT
CGACCAGGACATGATGGCAGAAGCCCGTCTGCTTCGTCAGCACAAGGGTCGTCTGGAAGC
TCGGATGCACATCTTAGAAGAACATAATAGACAACTGGAGGCGCAGTTGCAGAGACTTAG
GACTTTACTGGATGAGCCGGCGCAGGGCTCCCCTCCAGGTCGCACGGGAACACTGCAGAC
CCGCTCGGTGACGGCTTCTCAACTGGCGACCGACTCGCCGGCCAAGATGCACAACGGACT
GTACCACGAGACACAAACAAATGACTTAGGTCGAGCCGTCGAAGAGCTGGTGTCGGTGAT
GTCCGAGGACTCCCCCGCCCCCGCCGCGCCCCCGCAGTACACCAACGGCAAAACGAACAA
CGAATAATCGTTCGAACGCGACGCGAACATTCGCCGAGCATGGTGCTTCGAAATGTTGCC
ATATCGCAACTCGGTTCTGGCAACACTGTTATAACCAAAGACTGTTTTTACTAATTTTCG
ACTCATCACTAACAAATGCACATTGCCTGTCCTTTTATAAGATAATTTCTTGAACATTCC
ACTACGCTGAGCTTTCTTGGGGATCTCAAAAACAGTAGAAGCGAGGTGACAGCTCTGTGG
GACTAATGCGAAGTATAATACGATTTGGTACAATGCATTACAAAAATAAATTCAAACTCT
CAATTAAAAAAAAAAGTTTTATTAGAAAACATGGAGGCAAATTTTGCGGGGTTACTTTTT
CTAATACTTGTAAAAAAGTGTCAAAAAGCATACTACCAAATCAATTTAGTCCACAACAGC
TGTATTTTGTACATTAAACAACGATAATCGTATGCAACGCTTATTGTATTATAATAAGGG
CACGCCATTGTTGCAGTACGTGTCGTGATCGAGTCGATATTTCTACCATTTTAGTATAAT
TTCTCTCGAATGTTGCAACCCTGACAGTTTTTCTACTATTTTCGTTTTCCCCGCTCTTAC
GCCACCGACAGTGTTGCCAGAACAAACAAATCCAACGAAAAAGACATTGTAACGAGCATT
TATAAGTATTTTAACAATTCGTACCAAAATAATTTTGGAATTTAACTCTAATTTAAGGAC
ATATCTTGTTAGTACTTTTAGTACAATCTTCATTCATATCACTTCTTGTATACTTTCATA
TCATTTTTGCTAATAAAAATTACAGGCGCGTGTTTCGAAACCACGAAAATTTTTACAAAG
TTTTTCTATTTCAATGTTGCCAGCCCTAAGTAAAAACATCGTACTGTGGCAGCATTTTTT
TACAGAATTTTGTAAGCTTTAATACTCTTACGATTTTTAAGCCCTGATATTACTCCCGGA
AAGGCCTACGTTTTAGTGAAAATATAAAAATTAGGTAGACTCCGAAAGTTGAAAAACGCC
TAAACGGCCGTAGTTATTTGGATTCGTTGAAAGATTTTTAGTAGTGTAGTTTGTAGGCGA
ATATATATTATGAATAATAAATATTAAAACATGTTAACCACGTGCATGTGTATGTTATCG
ATATATTGTTAGAGATTAAAACGAAATATTAATCGTGCTTGACGCAACGTAGTAGAATAT
TGTTATACGCGGTACCTCAAAACTGAGGCGAGTAAACGCAAAATTCGATTGTCAAAATCG
ATTAAATTTTGCATTTAAACGACTCGTGTTATATCGATTTATAATAATCGAGTATTCAAA
TCGTAGGACAATAGACTCTTCTTAGTGTTATTCGGACTTTTCACTAACGGCATGTCGACA
CGTTTAGGATATAATTGGGATGGGATGACGTCATCCCATCCGTGACATTGTGTCTTCAAC
GACACTGCCTATTCTCTTAGGTAAGATATATTCGAAATGACTTTTATACGACAGTTAATT
ACCTGTTAAATCTAACTTTAATTAAGGACTTCCGATAATCATATCATAATCGTATAATTT
CTTCGAGTTTGGTAGATTTTTCAAAAACTAGCAACATTCGATTGTTTATGGCAACTTTTT
TAAATTTTAAGACGTTTAGTTTTCGAT
(5907 bp)

- SilkBase 1999-2023 -