SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27304_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		Yokozuna_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.88 TPM:3.26
ORF EntryO_TrvaMG18084_3prime_partial:A_TrvaMG_comp27304_c0_seq2
Sequence
(Nucleotide)
CTCAAAACTTAATTCTCAGAAAAAACTTGTAGAGTATGTGCAGAAGGAAAATCAACAAGG
TTGCCGTTTAGTACAACTCCCCGGCCAAGATCAAAGCATATAGGAGATCTCATTCACACA
GATATATCAGGACCAGTGAATATTCCTACATTGTCAGGTGAGTTATATTTTCATACAATA
ATAGATGATCATACACATTTCTGTGAGGTATACCTATTACAAAGGAAAAGTGAAGCAACA
GATAGGCTCATAGAATATGTTAATAGAATGGAAAGACAAATGGGCTGTAAAGTCAAGAAA
ATCAGAAGTGATAATGGTGGTGAGTTTAAAAATGAAAAACTATTTAAATTTTGCAGAGAC
AAAGGAATTATTCAACAGTTTACTTTGCCATATAGTCCACAGTCAAACGGAGTGTCAGAA
CGAATGAATAGAAACATTTATAATAGAGCTCGGATGTTATTAATTGAATCTGGTTTACCA
AAAGCTTTATGGGGCGAAGCAGTGCGTTGTGCTGTCTATCAAATCAACAGATGTCCATCG
TCTGCTATTAACTTTCAAACTCCAGCAGAGAAGATGTTTGGAGACAAAAATTTAACAAAA
CTTAGGATATTTGGATCAAAATGTTGGGTTCATATAATACCAACACAGGATAAACTTATG
CAAAGAGCTAAAGAAATGAGACTTGTAGGATATAGTCCAAATGGATATCGTCTATGGGAC
CCTAAAACTAACAAAGTGATATTGTCAAGAGATGTAAGAATTGATGAAACTCAAATAAAC
TACAAGGAAACGGAAGAAAATGAGTATGTAAATGGAGGAAAATACTATGATGATGAACTA
GAACAAAATGAAAATACTGAGAAAGAAACAGAAGATCACCAAGTAAATAATGAGGATGAT
GGAAACATACAACATGATAGAAGAAATAATGAAATTAATAAAAAAGTATCAAACAATGAA
GAGGAAGAAAATGAAGAGTTGAATAAAAGGGAAAGAAAGAATATCCAAAAATCTATAACA
AGAACAGGAAGAGAAATTCGTAAGCCAAAATACTTGGAAGACCATGATCTAAATATAGCA
TATTGTTTATTATCAGGAGATCCACAAGAATATGAAGAAGCAATACAAGACAAAGATTGG
GAAAATGCAATAAAGAAAGAATTAAAATCGCAAGAAAATATAGAGACCTGGGAAGAAGCT
ATATTACCGAAAGGAAGTAAAGCAATAGACACAAAATGGGTATTCAGAACAAAACAAGAT
GGAACCAAAAAGGCTCGATTAGTAGCTAAAGGCTTTCAACAACAGAATTATAATAATAAT
TATGCTCCAGTAGCAAAATTATCTACTATTAGATTAGTCATGAGTTTAGCAGTTCAACTG
GATTTGCCATTGAAGCAATTGGACGTACCAACAGCTTTTCTAAATGGAGTATTAAACGAT
AATGTCTATATCAAATGTCCAAAAGGGATGGAAATTAGTGAAGGAAAAGTTTTGAAACTT
AAAAAGGCTTTGTATGGATTAAAAGAAGCACCTAAATGTTGGAATCAAAGATTTCATAAT
TTTGTAACTCTGAAAGGGTTTATACAATCACAGCATGACTTATGTTTGTATAGTAAAGGG
CAAGTTTGGATATTAGTCTATGTAGATGATATTTTATACCTTGGAAGGAACAATGAAATG
ATTGAAGAATTAGTAAAGGAATTTAAAGTAAAAAATTTAGGAGAAGTACATAACTATTTA
GGATTAGAAGTAACAAGGACAGAAGATAGCTTGGAAATAAGACAAACAGAAATGATAAAA
AGACTTTTACAAAAATTTAACATGCAAGACTGCAAAGCAAGCAAAACTCCAATGGAAGTT
AATTTTAATGTGAACATTCCGTCACCATCAGATGTGATTGATGTACCATTTAAGGAATTA
ATAGGTTCTTTGTTGTATATTGCTATGAATAGTAGACCGGATATTACTTATGCTGTATCA
TTCTTAAGCAGATTTTTGGATAAACCTACGCAAGAGTTATGGATAGCGAGTAAGAGAGTA
TTACGTTATCTTAAAGGAACGTCTCATCAGGGGCTGATTTATAGGAAGACTGGAGATTTC
ACAAAATTATTAGCCTACTCAGACGCTGACTGGGCAGCTGATAAAACGGACCGTAAAAGC
ACAAGTGGCTGTGCTATATATCAAAGCGAGAATTTAATAACTTGGTTTTCTAGAAAGCAG
ACATGTACCGCTCTGTCAACAGCTGAAGCTGAGTATGTGGCTGCAGCACACTCAATGAGT
GAACTTATTCATATTAAAGGTGTACTTTCTGATATATTAAGCACTAAAATTGTTTCAGCT
CATTTATTAATTGATAATCAGAGTACTGTAAAATTGATACTTAATCAGATGAATACTAGA
GCTTCTAAACATATTGAAATTAAATATCATTATATTAAAGATTTAATTTATAAGAAAATA
GTGTCA
(2466 bp)

- SilkBase 1999-2023 -