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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27294_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_pericentriolar_material_1_protein_isoform_X4_[Bombyx_mori]
Ontology
GO:0000242 C pericentriolar material
GO:0001764 P neuron migration
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0022027 P interkinetic nuclear migration
GO:0030030 P cell projection organization
GO:0031122 P cytoplasmic microtubule organization
GO:0031965 C nuclear membrane
GO:0034451 C centriolar satellite
GO:0034453 P microtubule anchoring
GO:0034454 P microtubule anchoring at centrosome
GO:0035058 P non-motile cilium assembly
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0043234 C protein-containing complex
GO:0050768 P negative regulation of neurogenesis
GO:0051297 P centrosome cycle
GO:0071539 P protein localization to centrosome
GO:0090316 P positive regulation of intracellular protein transport
GO:0097150 P neuronal stem cell population maintenance
Transcript
Level		FPKM:2.01 TPM:1.69
ORF EntryO_TrvaMG18001_5prime_partial:A_TrvaMG_comp27294_c1_seq2
Sequence
(Nucleotide)
GCTAAGCAACAAATGGACGAAATGAACAGAGAAAGACAGCAAGAAATACAACCATCCACT
TCACACGATAATTTTGTAGTGCAGAACCAACCCTTTGGTGGTAACTATCATCATGCCAAT
CGCATGTATGCAGCAAACCAAATTGGTGTAGCTACTACACTACCTCATTCTACTGAAGGT
GTACACGGCCATCAGAATATGGTGAATGGTGATACTGATCATAGACATTCTGTTCACTCA
ATACACAGTCAAGATGAAAGGTTTTCTCATCGTGGAACAAACGTGGCTAGTTCAGAGGAA
GCTGCTGGTGGTTTACAAAGCGAAGGGGACGACGATGAGATTGTATTAACCGAACGAGGT
CGCATGTTGCAAATTAAATTAACAGAATTGCAACTGAAGAAACAACATATGGAAAGCTTG
GTAACGGAGTTTCAAAAGTTACAAATGGCGACTCGTATGCCACCCGCTCTCAACACATAC
TCTAGCTCTGGTGAAGAAAGCGCTGAAGATGAACCAGTCCGTAAATGCGTGAAATCTGGA
AACAACAATAAAAACGAAGATCCTTTTAAACTCATGGAAATAAAAGCAATTAAAACGGCG
CTTCAAAAAACTAAAGATCTGATGAGATCTGTTGAAAACTACGAGACTGACCACACTCCT
GCTTCACATGAAGCCGCATACAGAGAAGTTGCAGGCCATTCTAATATAAACGACAATAAA
TCTGAAGGCGGAGGCAGTATCGGAGGATGGTCTAACGAGGGCAGCATGTGTCGACTGAGG
AACACAATACCGCAACGACACAAGTTCACTAACGAACAACAACATCCAACACAACACCAA
CATTTGCAGCAACAAAGTCACGAAGCCAATTTAGCTTCACTGCAGGAGTTGGCACAAGAG
CTGCGTATGGAGACTGAGAAAATTATGGGAGAACGAGCAAGAATTAAAGATATGATCTCT
AATAAAACGGAAGTCCGAAAACAAAAGAAAGTGAACGAAGAGGTGCGAGCCGGACCGAGC
GGCGCGCCCGGGCCCGTCGAGCGACGACAGATGCAGCTGCGGGCGCTACTCGCTGAGAAA
CAACGAGAACTTGAAGCACTACTCAACAAAGAGAAAGTATTATGCACTGGAGCAGAAAGT
CAACAGCCAAAACCAGAATCGCGTACTGCATCAGTAGTCAATCAATCGTACAACAGTGAA
CAAGATGAACCTGATTCTCGATCTGAGCAAATATTGGAGATGCAGAATTCAAGAGACACT
GAAAACTTCAGGGGAGGTGGTGACAGTGTGTTAGATGCAAGATCACTTCCCACTCTTCCT
TCGCATCTTGGGAGTACATATGGAAGTGATAGTGATACTGCATCAAGAAACAAATCAAAT
CAGAGAAACCGACCCAGACGAAGATTGACACAAGAAAGGCAAACTGATGAGAGTGCATCC
CAGTCAAACAATACAAGTCAAAGTATTAGACATGAACCTAGACCAGAGCCTTCTAATGTC
AACATGGTTCCGCCTATCACTCAGAATCCTGAGCACTCTGGAAGTATGCCGTATCCACAT
CTACCGCCGCCTTGCTGGAACACCACAAAATCTAATCAAGATGTAAGATCAAATCAGTTC
ACTCAGAACAGTCACTCGCAAACAATGGAGCGGTTGCTCGGGACGCCGCAAATGACATTC
CCCCCCACCATGCCCTTCAACATGATGATGCCTTATGGTATGGTGGGCGGGTGCGGCTGT
GGTTGCGGCGTGTGGGGCACGTGGTGCTGGCAACAACTAGTGTTGCAGCAGAGAGACATA
CACCAACTCAGGGAACAAATCACACATTTGGAGGAACGTTGGCGATCTGAGACAGCCTCG
CACACCCTCAACAACCAAGTACCTCCGGGGAACAGAGCCAACAACTACTGGGATAACTTT
AGAAGTTATTCCCGACAGAATCTCCTTTCGGCAAACAATAAAGTAAATGCAGATGGACAC
TTGGGTGCCGGGGTCCCTCACAACCCGCATCCGTTAGTTGAAAGATCTCATAACACATTG
CGTCGTACTCCGTCTGCCAGCTCCCCTTGTGTGACCCCAAAAAGAAATACGAACACTACT
AGTTCTACGCAAAACGTTTCACAAACACCACAACCAACTAACGAGGAATTCCCGAACCGT
ACCACACGAAGAAACATGTCTTATGAACGATCTCTATCGTTTTCATCTGCACCAGATGTA
TTGAATGTCAATCAAAATGCTGACTCCGAAGTCACAGTTGCATCTCATTCTAGAAATGTA
GATGGGGCATCGCACTCTAGAAACGTAGACGAAAGTAATTCTGTAAACATACCGAACGTC
AATATAAACAGACAAGAAAGTGCACCAACAACATCGTTTAGGAATTTGAACATCACAAAT
CCAATACCTGAGATTATTCAATCACACTCAAATAACTTGAACAGTTCCACAAATAGCAAG
CGGAAATCATCCTCAAAACTACCTGCGAAAAATTCATCAAATCGCAAAAACAGTCCTTTA
GATTATTCACAAACAAGTAATATTAATATTGCAAGCTTATCACAAACACCAAACCCCAAC
TTAGCGTCTACTAGTCGTGAAAATGAAGAAAAAGCTACATCGAAACTATTTGATCCTCTC
AGGGAAAACATATATTCGGAAGTGACAACACTCATTGGAGTCAACGAGTCTCATCCTGAT
TTTCTAATACAACTATTCAGAGAATTACAATTAATTAGTTCTGAAAATGTACGGCAAAAA
GTATTACAATCCATTCGCAATGTACTCTCTCAATACAACACGATGCCTGAAAATCAGATT
GGCGAAGAGAGTCAAGAATCACCAATCTCTGAATCCGTTACTGCTGCAACGGAACAAACA
AACTATAACGACAGCTTGAGTGCGGTTTCCTTACCAAATATGTCTACCAACTCAATCCCG
ATTGATAACACAATCATTAGATTTTTAATCATGAAAAGTGATGAATTATGCACGACAGAT
TTCCTTGACACTTTGGCATCCCACATTATAAATACTTCGCCAGATTTAAGGTATTTGCAA
CATGCTAAAAGAAGGCTTCAGGAATTTCTTTCTAAGTATGAAAGAATGCGCGTTTCTGAT
GTGTCAAATGACATCATTGAAAATTTACCATTATACATAGCAGCAAGCGTTGAAACAACT
CCAAGGAGTAACGAACATTTAGATTCTACAAGAACACAAGATGTAGCAGGATCTCTAAAT
TTATTTAGTTCGAGTGATAGTCAGTTGCACCAACTTAACGCGTGTCCCTACGAAATGTGG
CCTGGCCATCTTCATATTGATATGGAATCTGATATGAATGAAGGAGCACATCCTAATCAA
GATAACAAAGTTGATCTAATCAATTGTACGGAGATGCATAATGGCGACTTAGCAGAGGCT
GATCAAACATGTCACGTCGACATGGATGAGAGCGGTACTGGGGAAGGAGAGGAAGCCGCA
GCCAACGCCGAAGCCCTACCCGATGTGGTGGACACGGACGAGGTCACACCCACAGAGGCA
GAAGCAGAGTGGCTTGGTCTTGACTGTGTGCCAACAAGACTCCACATGGAAGAAACACCT
GAAAAATAGAAGAAAATCTGTATTATTGTGTAATAATGAAACAAACACTCAAACTACATC
AATATATTCTAATGATGTCTAAGTGTTTGAGTGAACCTGAAAAAAAATATTAAATCTTCT
GTCTGCACCTGAAACATAAAAATAATACACAACAAATTTAGATTTTATTGATCCATTTAT
GTATAATTCTAAAGTGTTTTATGTTCTGCTAGATCATTATTTAATTATCATTATAGAATT
GTGAGGTGTGTTATTTGTTTGCGTGTTCTTTGTGTAATGCTATATTTTATTTTAAATAAA
TAAATGG
(3907 bp)

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