SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27293_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
Ontology
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030198 P extracellular matrix organization
GO:0030414 F peptidase inhibitor activity
GO:0031012 C extracellular matrix
Transcript
Level		FPKM:0.71 TPM:0.60
ORF EntryO_TrvaMG17943_5prime_partial:A_TrvaMG_comp27293_c0_seq3
Sequence
(Nucleotide)
TTTCAATTGTTTTTTCCACTAAATTAAAATCATCGAAAAAAAACAAAGTAATAAAAAAAT
ATAAAAATCATTAAAAAATTGTAACCTTCAATTATTTCGAATAATAAATTATAACCGGTG
GCTTGTTAAACTATGTTAAGCTAGTAAAACTACTTCTTTCTTCTAACAAGTGGAGCGTCG
TTCTGCATTTCCGCTTCCTCTGGACTCAGCTGACCTGCTTCCAAGCACGACTTGCAGCAG
AAGTTAGAGTAGTATTGGTGTTTACAGAATTTGCTTCTAACTATGAGATTGCAGTTCGCG
AAGAACGGATTGTCTGTGCACTTCGCCGGCGTCGTCACAGCTTTAACAGTGATTTGCACG
CTGGACTCGTGTGAGCTGTACATGTTGTTAGCGTGACACGTGTATGTGCCGCCATCGCTC
ACTGACACCTTGCGTATCGTCAGACGGGAAACACTGGTTCCACTTATTGAGACATTGTCG
TTCGGAATGATCCTAGTTCCGTCCTTGGTCCAGTAAACGTTCTCCGGCGTGGGGTACCCG
TCCACCTCGCACGGCAAGGAGAGCTCGGCGCCCGCGGACACCGTAGAAACCGTGGACGAT
ATGCGGGTCGACACTGGGGCAAATGTTCTCGAGCGATGTCCGCCCAGATGTTTCGGATAC
GCGGTGAACAAGGGGACGTTGAAGTCCAGGTCGAGGGGCGTGGTGGGCGTGGTGGTGGTG
GTGGTGACGGCGTCCAGCACACGCACGCGGATGTTGTCTCCGGGGCGCGCCACGATGAGG
CGGGGATCAGGCGGCGCGTCGTCGTGCCTCTGCGCGCGCACCTCTATGAGCAGCGAGGCG
GGGCTGCCCTCGCCGTTGTAGGCCTGGCAGGCGTACTCTCCCAGCGCCTCGTCGACGAGC
TGGCGGATGAGCAGCACGTTCCCGCGCGCCTCGTACAGCGTGCTGCTGAAGGGCACCATG
GGTCCGTCCAGCCCCCTGTACCAGTATATGTCGGGCGGCGGGTACCCGTAGGCGAGGCAG
CGCAGCACGAGCGGCCGCCCGAGCTCGCCCGTCACGACCGCGTTCTGTTCTCCCGCGATC
CCGACCGGCGTCCTCTCCGGATCGGTGACTTGCAGATGTATCTCCTGTTGGCTGGAGCCG
AGCTCGTTCTCCGCGATGCAGATGTAGACGCCGGTGTCGTTCCGGTAGAGCGACACGATC
TCCAGCGAGCCGTCCGACAGGATGCGCGTGCGACCCACCGTGCCGTCGATAGTAATCTCT
CCTCTCCTCCACGTGATCTTAGGCGGCGGGTTGCCGTGGAAGATGCAGCGCAGAGTCGCC
TTGCCGCCCTCCGACGCGTTCACTTCCGGCTCCGTCTCTCTGCTCGGCTCCGGAGCTTGA
GGTATGTCTGGTCGTCTGGTGGTAGTGGTAGTGGTAGTGGTGTAGACAGGTTGCACACAC
AGCCAGCTGCAGCCTCGCTCGCAACACTTGCCGTCGCCGCGACAGTCCGAGTCCTCCCTG
CACTCCGCCTCGCAGTCCCTCGGGTCAGCCGGAGTGGTCCACTCGTCAGTTGGACATGAT
CCGTTCTTGTTCAACTGTCTGCATTCAGTAGTGTTCTTGATAAGTTGCGGGAATATGGCA
TCTCGGTATTGTACGATGACGCATCGCTCCGTCGGCGCGCAACGCACGCTTGCGCAAAGA
TCTTCCGCACAACTGCACCTCTCGCATCCGTCGGGTCCGGTGAGGCGCGTCAGTCCGTGC
TCGCAGCGGATGACGTCACATGTGCGCTGGTGCAGCGTGCAGTCGACGGCGGGTCGCACG
CAGGCGCATCGCTCGCATCCCTCGGGGGTGCGTGTTCGCTGCACGCTCCACTCGCACGGG
AGGCTGTCGCACTCCGCCTTGTATCGATCGCAGTTCGGTAATATCTCGTTCGTTTCGATT
TCTGGTTGACAGACATACGAGTATCGTATCTGCTGTGTTTCTGTGTCTCTGTATGCTGTC
TGTACGCATTGCTCGTCTGGTTGACATCTGCTGGGCACGCAAGGGTCCGGTTCACATGAA
CACCGTGTGCATCCATCGCTGTCTGTGACGTTGTTGGTTCCAAACTGGCAGTAGATGTCA
CGGCATGCTGCGGCGTGCGTTGCGCACAGGTCACGTGGCACGCACGTGCATCGCTCGCAT
CCGTCACGTGTCGGCTCGCGGGCCACGTCGCCTTCGCAACGCAGCGCAGAACATTCCGCC
TCGTATGGACGACAGTCTGGGTATACCTCGTTCGTTTGTGGTCCAGTAGCCCCGCAGACT
TCTTCACATTCATCGACACTCGAGAACCTGTTAGCTCCTCCTCCGCACCCTCCGTACGTG
TAAGGCTTGCACGAGCCCGTGCGTATGTCCCAGTATATCTTAGGAACTATGGCGCGACAA
GGGCCGGGGTCCAGTTGAGCGAAACATACATTGATATCTCTGAAGGCTCCACATCTCCTC
TCGCACTCCTCCTCGGTGCGGTAACTGTTGGAGTGTCGACATCCCCCGAAGCCGGCCGCT
CTACAGCTCGACGTGGTAGAGTCGTAGTAGAACACTGTTATGTTTTCACCGCACGGCGCC
AGAGAGTCGGGCGTGCGACACTCATCTGTGACAGGCCGGTCAGTTTGAGGAGTGTGTGTA
GTAGTTGTGAAGATTGGCTGCTTTCTACATTGACCTTCGCAGTCCTCACGAGTCTCAAAT
CTATTATTGTTTCCTTGGCATCCGGTCCATACGAACTGTTGGCAGTCATTCCTTTCTTCA
CTGTAGTACCATTGGATCACGCGGTTCTGACAATTACCAGTCTCGGGAGGCAATCTGCAC
GGATCAACATATCCTTTACAGATTTCGGTGCACTCTTCAACGGTGGAGAATCTGTTGGGT
CCGCCATGACACCCGCCATAGATGAACTCTTGGCAGGCGCGGGTCTCGCTGTCGAAGTAG
TACTTGGGGAAGTACGCTCGACAAGGACCGGGGTCCAAGGGGTAAAGGCAAACATTGATA
TCTTTGAAAGCTCCACACGATCGTTCACAAGCCTCTTGACTTGCAAACGTTCCTGTTGTC
CTACAAGTTTGTCCTGACTCTGCATTGGTAAACGCAGCACATTCCCTTCTAGTGTTATCG
TAGTACCAAACAACGCCGGCGACTGAGCACGGCTCCAACGATTGTGATATCTGACACAAT
TCACTGAATCTGCTGTCAATGAGTACGGTAACGTTTGCAGGAGCCAATGTGGTAACAGGA
GTGACTGTTGTGGGCACCTCCGTAACTTGACCCGTCCTACACCGGCCCTCACACTCCTCG
CGTGACGAGAAACGGTTGTCATTTCCTTCGCAGCCTCCGTAAGCGAACTGGCTACACGTG
TCTCTTGAAGGATCGTAGAACCACTGCACTATCGAGTCGTTGCACGGCCCGGCGAGCATC
GGCAGCTGACAGATATCTTGTGCTGTATGACAGTAATACTGGCAGTACTGTTCAGAGGCG
AAGTTGTTCTTGTTACCGCCGCAGCCTCCATACTGGAATGTGGTACAGCGACCAAGTTGC
GGGTCGTACGCCCAGCGCGACTCGAACTGAGTACAGGGACCTGGGTCCTTCTCCGAGAAG
CAGAAGTCTGAGTTCTGTGAGTCCGGTTGTTGTGGCTGCGCAGTTCTTGCTGTTGTTGTT
GTGAGTTCGAGTTCAACACATCGTTGTTGACATTCAAACTCTGTGTTGAATCTGTTCTCG
TTTCCATTACACCCTCCGTAGTAGAATTGACGACATCTCTTTTCGGCAGTATCGTAGAAC
CATTTCTCTTCATAGTTGGCGCAATCACCAATTTCAGCTGGTAGCTCACATGTGTCGGGT
ACAAACGGTTTAGGACAGGCGTTAGTGCAAGACTCCTCATCGTCGAAGCGATTGTCGTTG
CCTCCACAACCGGTGTAGTAGAAGGGAACACAGCGACTCTCGGTCTCATTGTACGACCAG
ACTGCGACAGTCGCGCTACAGTTGCCTGCCTCTGGCGACTGCGTGCATCGAGGTTTAAGG
GTCCCGGGTGGATCGCAGCGTTGTTTGCAGGCGGCTTCCGATCCAAACTTGTTGGTGTTT
CCTTCGCATCCTCCCCAGATGAACTCCTCGCAGCGATGTGTCTGCGGGTTGTAGCCCCAG
CGCGGGTAGTGGCCGGCGCAGGTACCTTGCTCGATGGGTAGACTGCATTGGTCGCTGCTC
CTGGCAGGTTCACATTGTTCCTGGCAAAGTTCTTTAGTGACAAAGTTATTGTCGTTGCCC
AAACATCCTCCGTATAAGAACTGACTGCATTGTTCCCTTTCCGAGTCGTAGTACCAGTGG
TAGCTGTAGTTATCACACATCCCTTTGACTTGTGGAAGGTTGCATGCATCTTTGGGTGAG
GGATGTTCGCAGACATCTTCACATTCCTCTTTGGTCGCGAACCTGTTGCCGTTGCCTCCG
CTGCCTTCGTACCAAAATCGCGAGCAGCCGCCGTATTCCATATCATAGTACCAAAATATG
ACGAAGTTCCGTCCTGTACCACGGTCCTTCATCAAGCTACACACAGCCTGTTTATTTTCT
GGTATATCAGTACATCCCTTGAACTTAGGTCCTTCAGCAGTAGTTTGACCATCAGGACAA
CATCCATGTTTGCTGGTTGAACAGTCACAGCCTCCGAAGTTGGGTCCAGTTGCGGCGGTT
TCGTCATCTCCACAACAACCGAACTGTGATTCTTGGCATCTACAACCTTGCTGTCTCGGA
CCCTTAGCAACTGTGACACCGTCGGGACAGCAGCCAAACTGGTACGTGTAACAACCGCAT
CCTTCCCAGTTGGGGCCAGTTGCTGCTGTGTGCTTGTCTGGACAGCATCCGTGAGCAGTG
TGTTGACATTCACAACCTCCGTTATCAGGTCCACGGGCGTAGGTCTTGTTGTCAGGGCAA
CAGCCGAAGCGACCATAATTGCAGTCACAACCTTCGTAGTTAGGTCCTTCGGCGATCTTA
TAGTTATCGGGACAGCATCCAAATGGATATATTTTGCAACATCCTTCGCCATCTTCTCCA
TGGGCCGGAGTTTTATTGTCCGGACAACAGCCGAACCTTGATGTAGCGCAAGTAACCGGG
CAACTCGTTTTGTCAGCGTCTTGGGCTGTAGTAACATTATCAGGACAGCAACCGAACTCA
GTAGCTTCGCACGGACATCCATCTGGTCCGGATGCAGTGGCAGCAGTCGCGTTGTCATAG
CAACATCCAAACTCAGCCTCAGCGCACCCTTTGTCAGGTGCAGCTCCAGTAACTGGTTCT
TCTGAACTGCTGCTAGCTTCTGAGGATAATGTGGATGTTTCTGTTGTCTCTTCCGTTTCT
TCTTCCGTTTCTGTAGTACCTTCTGTGGTTGAATATTCAGGACATCCTTCAGAATCAGGA
CCTGTTGCTTCAGTTTCCTCATCTGCACAACAACCGTATGGGGAAGCTTTGCATGCTGGT
GGACATCCTTCTTGGTCATTGCCTTGTGCAGCAGTCTTGTTATCTGAGAGACAGCAACCG
AACAAGGTCTCCGCACATAAAGACGGGGGACAACCTCGTTCCTCTGGACCATGAGCGGGC
GACACTCCATCGGAACAGCATCCGTATCTAGTCTCCTTGCAAGTTCGCGCTTTTTCACAA
CCTTCATCGAACGGTCCTGCAGCTGGTGTTTTTCTGTCAGGGCAACATCCAAATTTAGTT
GTCGCACACTTAACTCTCCTTCTTCTGCACATGCGTTTCGTCGTTGGCCCGAAAGTGATA
GACCATTCTCGCAGAGAAACACCAGATGTTGTAGATTCGAAGTCGTCATAAGCGCTTGTA
CTGATGCTTTCTTCCGTAAAACCAGTTGTTTCTTCCGATCCAGGTGTAGTTGGTGAACCT
GATTCTGTCGTTTCTTCTGACCCAGGTGAAGTAGGTGATCCAGATTCGGTTGTTTCTTCA
GACCCAGGTGAAGTGGGTGAGCCAGATTCTGTTGTTTCT
(5979 bp)

- SilkBase 1999-2023 -