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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27276_c0_seq7
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TOX_high_mobility_group_box_family_member_3-like_isoform_X2_[Papilio_polytes]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0034056 F estrogen response element binding
GO:0042803 F protein homodimerization activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:2.62 TPM:2.21
ORF EntryO_TrvaMG17824_complete:A_TrvaMG_comp27276_c0_seq7
Sequence
(Nucleotide)
CGCACGTGTGCACGAAAAATACAAAATAACTCCAGTATTACTACGAGTGATACCATTATA
CGCGAACTATTATTGGTGTTTTTAATTTTATTATAATGAACTGACATTGTGCCACATCAC
TAGTTTAACTTAAACGTAATGTATTATGAATAAATGACTTCAGTGCGCTACCAATTAAAG
TTGTAATTGTATTATTTTCTACTTCTTCCGCCGACAAATTGGATCTTATATGAAACCAGC
GTGTATTTTATATCCAGGACGCCGAATGACACAGTTTTTACATGAAATATTGGACTGATT
ATTCAAAAATTTAAATGAGACCAGAAAATCTTGAAGTACCCTTGTCCGTTCCTCGTGACG
TCAAGAATAGTGTGTACGCCATGAATGATCAGACTTTTCACACACCCTCATTTGGCGACG
AAGAATTTGACATTCCTTTAATTCATGGACAGCATGCTCCAGGGTCCGGAGTCACAAATA
CGCATATTCAGTATACACAATTACACCACGCAGCACCACAGGTAGGTATGATGAACCCAG
CACAAGACGGTTTGGCACCACCGGGAGGTGCTCCTTCATATCAACAACCACTATATTTAC
AAGAACCACATACACCTGTCACAACACACAGTGGAGCTGGTGCTCCGGCAGGGAATTACA
TGATTCAACAACAGCCTGGAGGACAACAGAGGTTGTTGATAATGCAGCCAGCACAAACTA
TAAGTGGACCACCTACCCCAAGCACTCCAACTCAACCATCAGGGCCAGTGTATGGTTCTC
CACAAAGGGCATCACCACCTGGAACCACAAGTGATGACTCAGACGATAGTGTACCTTCAC
AGCACTCACAGTTGCCTGGTGATGCGGAAAGCCTTCTGCCTATCCATTATTGCTCAGCGA
GCCGGCAGCAACAAACTACGCTTCATCAGATTGGTGTCGCTAACATGGCTGTTAAAAGAA
CATCACCTGATCCCATGGAAAGTGGAATGAACCGTGGACAAATACAGAAGAAGCCTAAGG
TTCAGAAAAAAAAGAAAAAACGTGATCCAAATGAACCTCAAAAGCCAGTGTCAGCTTATG
CATTATTCTTTAGAGACACTCAGGCTGCAATTAAGGGCCAAAACCCAAATGCTAGTTTTG
GAGAGGTTTCTAAAATAGTTGCATCAATGTGGGATGGATTAGATTCAGAGCACAAAAGTG
TTTATAAGCAGAAAACAGAAATAGCAAAAAAGGAATATTTAAAGGCACTTGCTGCCTACA
GAGCCAGTCTAGTGTCAAAGGGAGGAGAACAAGAGAATCAAGCTATGTATAACCACAACA
ACAGTGGCAATGTTTGTGGAGGCAACAATAGTGCCACATATGGTAACTATTACCAAGGAC
AGCCTTATGGCAATGGCCACTCTCCTCAGAACTATGTACAAAATACTACGCCTCAAGGAT
ACTCCCCGCAGAATTATCCTGCTGGTCAGCCTCAAGCTTCATACCCTGGGCAGCCTGCAC
AACAATATCCACCTAACTCTCAAACTCCTCAAAATTACCAAGGGAACATGCCAATCCCTC
AAACCTACCAGAATGTTCCAGCACCATCACCTCAGAGCTATCAAATAAGCTCTTCAACGT
CACCTCCAAATTGTCAACCAAATGTAGCGCAGTCTCCTAGAAACTATCAACCAACACCCT
CACCAACCAATTACCCTGCAAGTTCATCAATGTCACCGCCAGGGTACAGACAAGTACAAG
CTCAATCCCCACCAATGGGAGCAGTACATCCTGGCATACAATATCACCCTCAACAGCAGA
TGCAAACAACACACACACAGATGCAACAGACACAGGTACACCAAGTTCAATACCAACAAC
AACAGCAATCTCAACAACAACAACAGCAGCAACAACAACAGCAACAGCAATCACAACAAC
AGCAACAAAACGAGGCGAGCGAAGCGGAGGACGCCATGGAACTGGACACGGAAGACAATG
ATGGCGGACACACTTTAATGTTACCCGAACAGATCCAAGCCTTACTATCGAAACCACCTC
CGAACTTCAACTCGGAACCGCCATTCAATTCCTCACAGCCGCCGCCATTCAACTCACAAG
AAGAGAAACAAGACGACGATAATAAAGATAAAGACAGAGACAGGAAGGACAGGGAGAGAG
ATAGAAGAGACAGGGACAGGGATAGGAGGGATAGGGATAGAGATAGAAGGGACAGGGGCG
GAGGACGGGATAGGGATAGGGAACGTGACGATAGAAGAGATCGTGACAGAGATAGAGGCA
GAGACAGGAGGGACAGAGATAGAGACAGGGATAGGGATAGAGAGAGACAACCGTCTAGAG
ATAACAGAGAAAGAAGCAAAGAGAAGTCACCGCGTCCGGCCGGAGACAACGAGAAGTCTC
TTCAGGAGAGGCTGTGGGAGATGGCCAACGGGAAACCCAACGGGGCCGACGACGAGCGGG
GGGACAGGCTGCCCCTCGCCGACACCCCACACACTGATAACGCGAGCGACGCGGACGGCG
GCTGGAACATCGCGCCGCGACAACACGCGCCCGCCTTCCGACCCGACTTAAGAATGAGAG
GACCACCACGGCAGCCAACGCCAGGTTGGATGGACGGACACGGTCCTCCTGGACCTTTCG
GACCCCGGTTTAACGGCATGGGACCGCCATTCAATCGACCTCCGTTTGAACGACCTCCAT
TCGAAGGAGGTCCTCCAATGTTTGACGGTCCTCCTCGCTTTGAACGACCCCCTTTCAATC
GAATGCCGTTCGATATGAATCGTCCGCCATTTGACGGATCCAGACCTCCCTTCGACGGAC
CACGGCCACCGTTTGACGGATCCCGTCCGCCTTTTGACGGCCCTCGGCCTCCTTTCGACG
GTTCAAGGCCTCCATTTGATGGTCCTCGGCCGCCATTCGACGGACCGAGACCTAATTTCG
ATGGGCCCAGACCACCGTTCGATGGATCAAGACCGCCATTTGATGGCCCCAGACCTCAGT
TCGACGGTCACAGGCCACATTTCGATGGTCCTCGACCGCCTTTCGATGGACCCCGACCAC
CATTCGACGGAACTAGACCGCCATTCGACAGTTCTAGACCACCGTTTGATGGTCCCCGTC
CTCCATTTGACGGTAATCGTCCTTATGACGGACCTCCATTCGACGGTCCTCCCGAGTTCA
GGAACAGAAGGTTTGACGACAGAGACAGGGAGGCTTACCCCGAGCGCTCTTGGAGTGGCG
GCGGCGGAGGAGGGGGACCGCGCCGTGATGACTGGGACGACAGGAGGAGGGACCGCCGGG
AACACGCGCCGCGCACACGGGAACACGACAACAGGCGCAGGAACTACGACGACAGGAGAC
CCGACCGACCCGACGTGACGTCACAACCACCCGCCGCGCCCGCACCCGCCGTCACACCCG
CCCCCACTACGGCACCCCCGCCGCGCCGCGAACGGGACAGGAAGTCGCGCTGGGGGGCGC
CCGACGACACCGCCGCGACAGAACAAACTGACACCGAACAAATAGATATGAACAAGTTCG
AGGTTCCTACCAACGACGCCGCCGGCCGCGACCACACCGCCGACCACACCGCCGACCGCT
CCGCCGACCACTCCGCCGACCACACCGCCGACACCAGCGAGACGCACAGCCAGCCCGCCA
CCGACGACTTCGACATAGAACCGCTACACAGACCTCACGACGAACCCGGCATAGAACAAG
ACGACACGCAGAACTCGGAGTCCGTCGGAACAGAAGACTACCGGGAGACGGAGGATGAAC
AAAATGAGAACAAAGAGGAACCTTATGAGGCTCCCGAACCGGACGAGGATACGGTCGGCT
CGGAGCCCGCCAGCGACGCCACTAACCTGTATGACGCTAATGACGCCGTCGATACCAGCT
TCGGTACTGCGCCTGAACCAGAGGAGGACTCGCAGCCCACCGCGGACCCCACGCCCGAGC
CCGCACCAGACACACCGGACGTACCGGATGTGCCGGACGTACCGGACGTCCCGGATGTGG
CGGACATGTTCAGCGAGGAGTCGAAGGAGGACGGCAAGCAGGCGGCCTGACACCGGCGCA
GGTGGAAGGTCGGCTACTTCCAGTGGAAATGATTCGGGTGGCGGCCCCGCCCCGCTATAA
CGCCAAAGATTGTTTAATGTTTTCATCGTCCAACTAAAACATCAGGATATACACACGACA
TGGTTTCTCACAGCACAGTAACATTATACGCGGTGTTGTCTCCGGATGTTTTGGTTGATC
GGTTTTTATAGACAAATGAAATATACGAGTGCCTTATTGGTTACCGATGTGGTGTTTTGT
TTTCGTCGGCGTCGCGGGAAGGGGAGCCCGCCTCGGCGCTCAAACCGAGCGACCCGGGCC
AGGTACGGTCACACGCGCGTCGAGCACACTGCCGCATGTAGCACGAACACACGGTGTATC
AACGATCATACTCTCTCTGACTTGTGTGTAGACGTAGCCTGACTAATTCATTTTTAATCT
GAGAACAAATTTTATTAAATATTTTATCATGATTTT
(4536 bp)

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