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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27276_c0_seq6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TOX_high_mobility_group_box_family_member_3-like_isoform_X2_[Papilio_polytes]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0034056 F estrogen response element binding
GO:0042803 F protein homodimerization activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:0.28 TPM:0.24
ORF EntryO_TrvaMG17822_3prime_partial:A_TrvaMG_comp27276_c0_seq6
Sequence
(Nucleotide)
CGCACGTGTGCACGAAAAATACAAAATAACTCCAGTATTACTACGAGTGATACCATTATA
CGCGAACTATTATTGGTGTTTTTAATTTTATTATAATGAACTGACATTGTGCCACATCAC
TAGTTTAACTTAAACGTAATGTATTATGAATAAATGACTTCAGTGCGCTACCAATTAAAG
TTGTAATTGTATTATTTTCTACTTCTTCCGCCGACAAATTGGATCTTATATGAAACCAGC
GTGTATTTTATATCCAGGACGCCGAATGACACAGTTTTTACATGAAATATTGGACTGATT
ATTCAAAAATTTAAATGAGACCAGAAAATCTTGAAGTACCCTTGTCCGTTCCTCGTGACG
TCAAGAATAGTGTGTACGCCATGAATGATCAGACTTTTCACACACCCTCATTTGGCGACG
AAGAATTTGACATTCCTTTAATTCATGGACAGCATGCTCCAGGGTCCGGAGTCACAAATA
CGCATATTCAGTATACACAATTACACCACGCAGCACCACAGGTAGGTATGATGAACCCAG
CACAAGACGGTTTGGCACCACCGGGAGGTGCTCCTTCATATCAACAACCACTATATTTAC
AAGAACCACATACACCTGTCACAACACACAGTGGAGCTGGTGCTCCGGCAGGGAATTACA
TGATTCAACAACAGCCTGGAGGACAACAGAGGTTGTTGATAATGCAGCCAGCACAAACTA
TAAGTGGACCACCTACCCCAAGCACTCCAACTCAACCATCAGGGCCAGTGTATGGTTCTC
CACAAAGGGCATCACCACCTGGAACCACAAGTGATGACTCAGACGATAGTGTACCTTCAC
AGCACTCACAGTTGCCTGGTGATGCGGAAAGCCTTCTGCCTATCCATTATTGCTCAGCGA
GCCGGCAGCAACAAACTACGCTTCATCAGATTGGTGTCGCTAACATGGCTGTTAAAAGAA
CATCACCTGATCCCATGGAAAGTGGAATGAACCGTGGACAAATACAGAAGAAGCCTAAGG
TTCAGAAAAAAAAGAAAAAACGTGATCCAAATGAACCTCAAAAGCCAGTGTCAGCTTATG
CATTATTCTTTAGAGACACTCAGGCTGCAATTAAGGGCCAAAACCCAAATGCTAGTTTTG
GAGAGGTTTCTAAAATAGTTGCATCAATGTGGGATGGATTAGATTCAGAGCACAAAAGTG
TTTATAAGCAGAAAACAGAAATAGCAAAAAAGGAATATTTAAAGGCACTTGCTGCCTACA
GAGCCAGTCTAGTGTCAAAGGGAGGAGAACAAGAGAATCAAGCTATGTATAACCACAACA
ACAGTGGCAATGTTTGTGGAGGCAACAATAGTGCCACATATGGTAACTATTACCAAGGAC
AGCCTTATGGCAATGGCCACTCTCCTCAGAACTATGTACAAAATACTACGCCTCAAGGAT
ACTCCCCGCAGAATTATCCTGCTGGTCAGCCTCAAGCTTCATACCCTGGGCAGCCTGCAC
AACAATATCCACCTAACTCTCAAACTCCTCAAAATTACCAAGGGAACATGCCAATCCCTC
AAACCTACCAGAATGTTCCAGCACCATCACCTCAGAGCTATCAAATAAGCTCTTCAACGT
CACCTCCAAATTGTCAACCAAATGTAGCGCAGTCTCCTAGAAACTATCAACCAACACCCT
CACCAACCAATTACCCTGCAAGTTCATCAATGTCACCGCCAGGGTACAGACAAGTACAAG
CTCAATCCCCACCAATGGGAGCAGTACATCCTGGCATACAATATCACCCTCAACAGCAGA
TGCAAACAACACACACACAGATGCAACAGACACAGGTACACCAAGTTCAATACCAACAAC
AACAGCAATCTCAACAACAACAACAGCAGCAACAAATGCTGCAACAACAACAAAATCAAC
AACAACCGATTTTACAACAAAGTCAGCAACAGCAACTGCTGCATCAACAGAATCAACAGA
TGATGCAACAGCAAGCCAAGCAGACACAAAATCAGCAACAACAACCACAGCAACAACAAT
GTCAACAACCGCCATTACAGCCTGTTAAATCGGAACAAAACACACCACCCACTAGTAATG
GACATCCTCAAAAAACAACAGAACAAAATGAAAAGAGGAGTAACCCTTGTATTCGTCAGG
GCTGTACTAATCCAGCAATATCAAACAGCGAATGGGAAGATGAGTACTGCTCTAAT
(2216 bp)

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