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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27276_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_TOX_high_mobility_group_box_family_member_3-like_isoform_X3_[Papilio_polytes]
Ontology
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0034056 F estrogen response element binding
GO:0042803 F protein homodimerization activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051219 F phosphoprotein binding
Transcript
Level		FPKM:2.74 TPM:2.31
ORF EntryO_TrvaMG17797_complete:A_TrvaMG_comp27276_c0_seq2
Sequence
(Nucleotide)
CGCACGTGTGCACGAAAAATACAAAATAACTCCAGTATTACTACGAGTGATACCATTATA
CGCGAACTATTATTGGTGTTTTTAATTTTATTATAATGAACTGACATTGTGCCACATCAC
TAGTTTAACTTAAACGTAATGTATTATGAATAAATGACTTCAGTGCGCTACCAATTAAAG
TTGTAATTGTATTATTTTCTACTTCTTCCGCCGACAAATTGGATCTTATATGAAACCAGC
GTGTATTTTATATCCAGGACGCCGAATGACACAGTTTTTACATGAAATATTGGACTGATT
ATTCAAAAATTTAAATGAGACCAGAAAATCTTGAAGTACCCTTGTCCGTTCCTCGTGACG
TCAAGAATAGTGTGTACGCCATGAATGATCAGACTTTTCACACACCCTCATTTGGCGACG
AAGAATTTGACATTCCTTTAATTCATGGACAGCATGCTCCAGGGTCCGGAGTCACAAATA
CGCATATTCAGTATACACAATTACACCACGCAGCACCACAGGTAGGTATGATGAACCCAG
CACAAGACGGTTTGGCACCACCGGGAGGTGCTCCTTCATATCAACAACCACTATATTTAC
AAGAACCACATACACCTGTCACAACACACAGTGGAGCTGGTGCTCCGGCAGGGAATTACA
TGATTCAACAACAGCCTGGAGGACAACAGAGGTTGTTGATAATGCAGCCAGCACAAACTA
TAAGTGGACCACCTACCCCAAGCACTCCAACTCAACCATCAGGGCCAGTGTATGGTTCTC
CACAAAGGGCATCACCACCTGGAACCACAAGTGATGACTCAGACGATAGTGTACCTTCAC
AGCACTCACAGATTGGTGTCGCTAACATGGCTGTTAAAAGAACATCACCTGATCCCATGG
AAAGTGGAATGAACCGTGGACAAATACAGAAGAAGCCTAAGGTTCAGAAAAAAAAGAAAA
AACGTGATCCAAATGAACCTCAAAAGCCAGTGTCAGCTTATGCATTATTCTTTAGAGACA
CTCAGGCTGCAATTAAGGGCCAAAACCCAAATGCTAGTTTTGGAGAGGTTTCTAAAATAG
TTGCATCAATGTGGGATGGATTAGATTCAGAGCACAAAAGTGTTTATAAGCAGAAAACAG
AAATAGCAAAAAAGGAATATTTAAAGGCACTTGCTGCCTACAGAGCCAGTCTAGTGTCAA
AGGGAGGAGAACAAGAGAATCAAGCTATGTATAACCACAACAACAGTGGCAATGTTTGTG
GAGGCAACAATAGTGCCACATATGGTAACTATTACCAAGGACAGCCTTATGGCAATGGCC
ACTCTCCTCAGAACTATGTACAAAATACTACGCCTCAAGGATACTCCCCGCAGAATTATC
CTGCTGGTCAGCCTCAAGCTTCATACCCTGGGCAGCCTGCACAACAATATCCACCTAACT
CTCAAACTCCTCAAAATTACCAAGGGAACATGCCAATCCCTCAAACCTACCAGAATGTTC
CAGCACCATCACCTCAGAGCTATCAAATAAGCTCTTCAACGTCACCTCCAAATTGTCAAC
CAAATGTAGCGCAGTCTCCTAGAAACTATCAACCAACACCCTCACCAACCAATTACCCTG
CAAGTTCATCAATGTCACCGCCAGGGTACAGACAAGTACAAGCTCAATCCCCACCAATGG
GAGCAGTACATCCTGGCATACAATATCACCCTCAACAGCAGATGCAAACAACACACACAC
AGATGCAACAGACACAGGTACACCAAGTTCAATACCAACAACAACAGCAATCTCAACAAC
AACAACAGCAGCAACAACAACAGCAACAGCAATCACAACAACAGCAACAAAACGAGGCGA
GCGAAGCGGAGGACGCCATGGAACTGGACACGGAAGACAATGATGGCGGACACACTTTAA
TGTTACCCGAACAGATCCAAGCCTTACTATCGAAACCACCTCCGAACTTCAACTCGGAAC
CGCCATTCAATTCCTCACAGCCGCCGCCATTCAACTCACAAGAAGAGAAACAAGACGACG
ATAATAAAGATAAAGACAGAGACAGGAAGGACAGGGAGAGAGATAGAAGAGACAGGGACA
GGGATAGGAGGGATAGGGATAGAGATAGAAGGGACAGGGGCGGAGGACGGGATAGGGATA
GGGAACGTGACGATAGAAGAGATCGTGACAGAGATAGAGGCAGAGACAGGAGGGACAGAG
ATAGAGACAGGGATAGGGATAGAGAGAGACAACCGTCTAGAGATAACAGAGAAAGAAGCA
AAGAGAAGTCACCGCGTCCGGCCGGAGACAACGAGAAGTCTCTTCAGGAGAGGCTGTGGG
AGATGGCCAACGGGAAACCCAACGGGGCCGACGACGAGCGGGGGGACAGGCTGCCCCTCG
CCGACACCCCACACACTGATAACGCGAGCGACGCGGACGGCGGCTGGAACATCGCGCCGC
GACAACACGCGCCCGCCTTCCGACCCGACTTAAGAATGAGAGGACCACCACGGCAGCCAA
CGCCAGGTTGGATGGACGGACACGGTCCTCCTGGACCTTTCGGACCCCGGTTTAACGGCA
TGGGACCGCCATTCAATCGACCTCCGTTTGAACGACCTCCATTCGAAGGAGGTCCTCCAA
TGTTTGACGGTCCTCCTCGCTTTGAACGACCCCCTTTCAATCGAATGCCGTTCGATATGA
ATCGTCCGCCATTTGACGGATCCAGACCTCCCTTCGACGGACCACGGCCACCGTTTGACG
GATCCCGTCCGCCTTTTGACGGCCCTCGGCCTCCTTTCGACGGTTCAAGGCCTCCATTTG
ATGGTCCTCGGCCGCCATTCGACGGACCGAGACCTAATTTCGATGGGCCCAGACCACCGT
TCGATGGATCAAGACCGCCATTTGATGGCCCCAGACCTCAGTTCGACGGTCACAGGCCAC
ATTTCGATGGTCCTCGACCGCCTTTCGATGGACCCCGACCACCATTCGACGGAACTAGAC
CGCCATTCGACAGTTCTAGACCACCGTTTGATGGTCCCCGTCCTCCATTTGACGGTAATC
GTCCTTATGACGGACCTCCATTCGACGGTCCTCCCGAGTTCAGGAACAGAAGGTTTGACG
ACAGAGACAGGGAGGCTTACCCCGAGCGCTCTTGGAGTGGCGGCGGCGGAGGAGGGGGAC
CGCGCCGTGATGACTGGGACGACAGGAGGAGGGACCGCCGGGAACACGCGCCGCGCACAC
GGGAACACGACAACAGGCGCAGGAACTACGACGACAGGAGACCCGACCGACCCGACGTGA
CGTCACAACCACCCGCCGCGCCCGCACCCGCCGTCACACCCGCCCCCACTACGGCACCCC
CGCCGCGCCGCGAACGGGACAGGAAGTCGCGCTGGGGGGCGCCCGACGACACCGCCGCGA
CAGAACAAACTGACACCGAACAAATAGATATGAACAAGTTCGAGGTTCCTACCAACGACG
CCGCCGGCCGCGACCACACCGCCGACCACACCGCCGACCGCTCCGCCGACCACTCCGCCG
ACCACACCGCCGACACCAGCGAGACGCACAGCCAGCCCGCCACCGACGACTTCGACATAG
AACCGCTACACAGACCTCACGACGAACCCGGCATAGAACAAGACGACACGCAGAACTCGG
AGTCCGTCGGAACAGAAGACTACCGGGAGACGGAGGATGAACAAAATGAGAACAAAGAGG
AACCTTATGAGGCTCCCGAACCGGACGAGGATACGGTCGGCTCGGAGCCCGCCAGCGACG
CCACTAACCTGTATGACGCTAATGACGCCGTCGATACCAGCTTCGGTACTGCGCCTGAAC
CAGAGGAGGACTCGCAGCCCACCGCGGACCCCACGCCCGAGCCCGCACCAGACACACCGG
ACGTACCGGATGTGCCGGACGTACCGGACGTCCCGGATGTGGCGGACATGTTCAGCGAGG
AGTCGAAGGAGGACGGCAAGCAGGCGGCCTGACACCGGCGCAGGTGGAAGGTCGGCTACT
TCCAGTGGAAATGATTCGGGTGGCGGCCCCGCCCCGCTATAACGCCAAAGATTGTTTAAT
GTTTTCATCGTCCAACTAAAACATCAGGATATACACACGACATGGTTTCTCACAGCACAG
TAACATTATACGCGGTGTTGTCTCCGGATGTTTTGGTTGATCGGTTTTTATAGACAAATG
AAATATACGAGTGCCTTATTGGTTACCGATGTGGTGTTTTGTTTTCGTCGGCGTCGCGGG
AAGGGGAGCCCGCCTCGGCGCTCAAACCGAGCGACCCGGGCCAGGTACGGTCACACGCGC
GTCGAGCACACTGCCGCATGTAGCACGAACACACGGTGTATCAACGATCATACTCTCTCT
GACTTGTGTGTAGACGTAGCCTGACTAATTCATTTTTAATCTGAGAACAAATTTTATTAA
ATATTTTATCATGATTTT
(4458 bp)

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