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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27264_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_roadkill_isoform_X2_[Amyelois_transitella]
Ontology
GO:0001654 P eye development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007367 P segment polarity determination
GO:0016567 P protein ubiquitination
GO:0030162 P regulation of proteolysis
GO:0031648 P protein destabilization
GO:0042067 P establishment of ommatidial planar polarity
GO:0042308 P negative regulation of protein import into nucleus
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0045879 P negative regulation of smoothened signaling pathway
GO:0046330 P positive regulation of JNK cascade
GO:0046331 P lateral inhibition
GO:0048592 P eye morphogenesis
Transcript
Level		FPKM:0.93 TPM:0.79
ORF EntryO_TrvaMG17722_complete:A_TrvaMG_comp27264_c0_seq4
Sequence
(Nucleotide)
TATGTAACTATATTTATATTACACAACAACGGTAGTTGTCCACTATGTATATTTTGGAAA
GTGGGTATAAAATGGTATTAAATATTGGCCACAATATAATTATAATTATTAATTCATTCG
GCATTTTTATTTATAAAATGTGAAGACAGTTTACATAAATAAAGTAATAAAAAGTTTTCT
TACTTGTCATTGAAAATTAAGATAATAAAGATTTAATACTAATAAATAGATGAAGATAAA
AACGAAATTAAAAAATTTACACAATAGAAGAAGTGTATGTAGTGAGCAAATCACAGTAGA
TTTGTAAAGTGCCTGTTGGCGATATGAGCATGACACACAATTTACAATCGATGAAGCGAA
ACCAACAACAATACATTAACTTTTAAATAATTCAAGAGATAATTCGCCACAACAAAACAA
AAGCTTGTATCTATACCCTATGGAAATTAAACGAGAGAAACATCACAATATGTCATTGGA
ATAGCATCCCTACAGATACAGTAAAAAAAATAATGGTGTCACCAGTGATACCACTTACAA
GTTAGTACTTAGAAATATTTTAATGGTGGGATCGTAGCTCATCTATATACAATACCAACA
ATTTCAATAGACTTATACAATCACTCGAGTCCCCTAAGTCACGCGCCACGACTCGCCGCG
GCTTCCGACGGAGCGGGAACTACTACATACAATTGATAAATGCGTGCGATGCTACATAAC
ACTTGCATCATTAAACACATCGCGACCGCCCGAAGCCGCGAGACGAATCATTCACGTCTA
TTGCATCCGAACACTTCGCTACACACAAATAGATTCGAAAAAGCCTACATTATACAAGGC
AGGCGGTAAGATTAAAGTCGCCTCCTGGTCGGTATGATAGTAGTGTGGCCTCGGCTTGCT
CTGCAACTGATTCTGATAGGCACTGTTTGTGCCGTCGCACGACAGACAACATAATATTAT
ATTGCTTTACTTATATACATGGTTGCTATACTTATATACTTATATACTTATATACATGGT
GGCATGTAATATACATGGTTGATAACAGATTCAAGTCTATTCATGGCATTGAGACTATTT
TTATTTATTTACATCTTATTTATATGTTTGAAAGTGGTAGAATTTTCCTAGTACTGCTGT
TTTTGTTTACCGAGTAGACAAGCAGTCAATTTCGTTCAGAACTTACTCATTAGGCACTGC
AGGGCTATCGAACCGACCAGTCAGGGAGCGACCTAATTTCGATCACTAAGGGAAAGGGGA
ACACCAATTTCGAATGCAACTCGCATCGCACAGTACTAATTTAAAGAAATCACGAGGACA
CATTCCGGTAGTCGTTCGATACGCGTCCGACGCGGTAGGATGGGCGCACGGTGAGATCAA
TGACAGCGGTCGAGCCGCGTCGAGACGCCCGTCTTTGGTATGGGGGCGGCTAGCGGGGCG
GCAGGAGGCCCGGCGTGGAGCCCGGCGGGGGGTCGCTCTAGGCCTGCTTGACGCGCTTCC
GGGGCGGGCCGATGGGCGGTATCTGCTGCTGCTGCGTGGCGAGCGCTCGGAAGGCCTCCG
CGATGAGGTGCGGGTGCGACGAGATCATGTTCTTCCAGCCCGCCGTGTCCATCACGTCCG
TCGCGTGACTCGTGTTAATGAAGTCTATTGTCTGCGCTTTGAGCTGATCCGCCGAGTGTA
AGTCGGCAAGTATTAGTGTGTCGGCCGCCGTCTCCACAGACAGACTCAAACATAACGCCT
CTTCGCACATTACTTTTAACCGCTCCAACGCGTACTTATCGGCTGCTGCTAATAAATCAT
CGGCCATCTTGTCTAAGTTTGGCGCTCTTCCCGTGTATATGAAACGTAACATTTCTCTTA
AGACTTCGTGATCAACGTCTGTGATGTCTACTCTATTTCTTTTTCTTTCTTCCATTTCGT
GTTCAAACATCGCTGCGAACACAGGACTCCGCGCTGCTAATATAGCTTTATGCGCTTGAA
ACTCCCTTCCTCCGACCGCTAACGTGACGTCCGAGAACCTTTCGTTGTCAAAAAGAGCTC
CTAAATCGTCTGACAACCTGCATTCTGGCACTTTGAACTGAACCACATTGCTTTGTCCAC
TAATATTGATGCTGTCCGCGACAACTGACACTTCACAGAATATCGTCAGTTTGTCTTCGG
GTAATAAACCATTCGCTTCGTCTAGCAGGAAATCTCTTCTGATAAACTTTTTGAATCCCC
AGTCTTTTCCTTGAACAAATCTGTACGCCCGCTGCGACTCCATTGCTTTCGTTTCTTCTC
TTTTAGCATTTAATATTGAGAATTTAAACTTTGCGCGCACTTCTGATTTATTACACGAGA
CTAATAATAAGTATAAGGATAAATAGTCTTTGCTCTCTTCATCGAGTCCTTTTGGATTAA
CACGCAGACACCATTTTAATTTATCACTAGCACCAGCTGAGAAAGTCGATGATTTTAACA
CTTCACCCATTTCTTCTCTACAAAAACTAAAATTGTTTATTGTCCACATGTAACTGAATT
TCACCACTTTGACTTGTGTGAAGCACCAGTTTTCAGCGACGGGCGTGTTCCCGTCGTGTA
ACGGGCTGGGCACGCGGCTCACCGCCATCCCGCCAGCGCCGTTCGAAGAGACGCGCGCCG
ACTGCGGAGAGGGCGCGCCGCCGCCCGACCCGCCAACGCACTCGCTGCCCGAACCGAGCC
TGGCTAAGGCCATTATTCGTTCGTATAATCCAATTTTCCAAAATATTAACACTTCAAACA
CTCATATGGTCACGAGTCATTAAATGTAATTAAAAATATTCACTAAATCGATCAACACGT
ATGTGCGAAAGTGTATCACGTTTGACAGTTTCACTTCACCACATGGCTTCAACATAGGTT
GAGCGAAATGGCGAGGTACGTGCAGTACGCTCAAAGAATGACGGGCGACTGCCGCGAGTA
AAGTGTACGGTACAGTCACACAGAATAGTGTAATCGGCGCGCCG
(2984 bp)

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