SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27262_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105841433_[Bombyx_mori]
Ontology
GO:0000922 C spindle pole
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006508 P proteolysis
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0010212 P response to ionizing radiation
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0070531 C BRCA1-A complex
GO:0070536 P protein K63-linked deubiquitination
GO:0070537 P histone H2A K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_TrvaMG17700_complete:A_TrvaMG_comp27262_c0_seq5
Sequence
(Nucleotide)
TGCTTTGGTTTGTGTGCAACATGCATTATCAACAGAAAAAGAAGAGATCATGGGCTTACT
CATTGGTGAGGTACATGACAATGGCACACTTGTATCAATAGTATCATCAGTAATATTGCG
ACGACTAGATAAAAAACCAGACCGTGTTGAAATATCTGAAGAACAATTGGTTCAAGCTAC
TCTTAGAGCTGAAGAGTTAGCAGCAGAAGTTGGCCGCCCTCTTCGGGTTGTTGGATGGTA
CCATTCACATCCACACATTACTGTCTGGCCCTCACACGTTGATCTTTCAACACAGTCTAT
GTATCAAAGGATGGATGAGAGTTTTGTTGGAATTATTTTTGCAGTTTTCCTCACAGACCA
ATCTTCAAAAGCCCCTTCAATACAGATAACTTGCTTTCAATCAATAAATGATGGAGCTAG
TCAGAATCGAATTGAAATAGAAATGGAAATCACAACCAATGACTCATTGTTGACAAATAA
TTTTGAGGCAAGTATGGTTAAAAATATCCTATCATTAAATAATAATAAGGATTAATTATG
AGTTAAACAATTTGATCAATTACTGATGTTTATAATAATATAATGTATAGATTTAATGTA
TATGGTTTTTTTTCTTTAGACCTTAACACAATTACCAGCCATACTGAAAGAAGAAGAAGA
TGAGGCTTTTAACAATGAAATAAGATTTGATGATATTGATGACATAGTTACTAAACAACA
TAATGCTGCAGTTCGGACTATTTCGATTGGCCACATTGTTGATAAGGTACTTTCTTTCAT
AATTCATTTTACCATATCTTGAAAGATATCAATAATTTATTAATTTACAGATGTCCAGGC
CAATGCTGGAAGCTTTAGTAGCCAGGAATTTACTGAACAAAATACGCCTCAAAGCACTAA
AGAAACAACATCAGCAGATGATGTCTAAACTGGAAAATATGACTGGCATGACTTAACCTC
TAAAAATACTGTTAAATAAAAATACTAATTGAATTCATTTCTGTCAATAATTTCAAACCC
GTCTGAAGAATCTTTACTTGAATTTCGTTTTCTAGTATTTATTTCTGGACGTTTTACTAA
ATTTGTTAAAGCACCAGTGAAATTCCAAAAAGTATTATAAGCACTATTAGTCCACGTATT
TGCTTCAGGTGTTTCCAAAGTAATCTGCAGTCTTTCTTTTGGCAGCTGATCTAGGGGCAT
GTATTCATCTTCACTTGAGTCTGATGTTCCAATATCCTTTTCTAGGGTATTAATCTTATC
AACTGAAAAACTTGTGACTATACTACTGTTTTCTGAGCTATCACTTGCTTCTTCTAGTGG
CATATCTTCTGGTTTCCAATAATCATAACTTTGCTTTTCATCGATAACCTGCTGATCAGC
ATCAATTGACAAAAGCTGTATGTCTACATCTGTTATCTCAGGAATCAGTCCTTCCAGCTC
ACTTTCAGATTCTAAATCCAGTTGAATGTATTTGAAAAAGTTAATAGCTGGATAGAGAAC
TTTATGTGACAAACACATAAACCAACTTATGATATACATTAGTATATAACCATTTATATA
TTTTCCAATAAAGAAAATACATCCCAGGATTATGTTAGCAACCAGGAATGCTTTTGTGTG
ATTATTTTGTCTTATACATATGAATTCAGACCATTTCTTCCAAAACCATTGTTGAATTTG
TTGATAAATTACTGCGATTTTTTTCCCATTATAACTTGAAAGTCTTTCCAAGCAACCAGT
CCTGTGCTTGTGTTTCAACCATGTTTCAAATGAATCCAAACAAAGTAGTGTAATGCACAT
ACATATTACAAATTTGAATAAATTTACTTCGCGATATACACACACTATAAACAGAACATT
TTTAAAAACTACGAACGCAATAGAAAGCCAAATTTGTTTCCAAAGAATTACTTCTTCAAA
TAATCCAATAATAGCTGACAATAAGATAAAAGATTGACTTGGTTGATTTTCTTGACATTT
TGATTTTTTAGTCCATATTAATTTCTTCTTTATTGATGCTAACATTACTAAATTTATATT
TAAATTAAAAGAGCTCTAAATCAAGTTTCTAAGTATTAATACCAATTACAATGAAATAAA
CTCAAGTTTGAAAGCCAAAACTTTAAAACA
(2130 bp)

- SilkBase 1999-2023 -