SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27259_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vacuolar_protein_sorting-associated_protein_13C_[Bombyx_mori]
Ontology
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006895 P Golgi to endosome transport
GO:0007005 P mitochondrion organization
GO:0019898 C extrinsic component of membrane
GO:0042593 P glucose homeostasis
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
GO:1905090 P negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:9.28 TPM:7.81
ORF EntryO_TrvaMG17677_5prime_partial:A_TrvaMG_comp27259_c0_seq4
Sequence
(Nucleotide)
TGAGTATTCAAGAAAACATTTAATTGTACAACATTCCAAAAACCACAAACATTATATTAA
AAGATAAAATAAACTCTTATAAATACGAATACACATTACAAAGCTCTCTTTAAATAAGTG
AGTAAAGGAAGACGGTCATATAATGTAAACTTAATTTATGTATTTTTGAAATCTTATTAA
ATGCAAAGGCGTACTTTAATTTATGGATTCTCCTCCGAAACGAATGGCAGTATCATACAT
GAAAATGGTTTAAAAGTGCGTATAGAAATAACATTGAAATTCATTGCAATTAGAAGTTTT
CACTCAATTTATTTTATGAAAAATAAATTTGTGGCTACTAAACTTTAACTATTTAATTAA
GAACAATCGCACTCAAAAAATATTAGATGCAGATTTAAATGTTCAATTATTACTGATCAT
TCAAATAAATAAATTGATGTATCGATTTGAGCGAGTGCAGCTTAAAAAGCTTTAGTTTTG
ATTTACAAAATAAACATGAAATACAGTACAATGTAGCGATAATGATTACTTGATGTGATA
TGTGATCGTTAAGTTTTCATTACGTTTCGGAGGCATTTCCCTATTATTTTATTTGTACTT
GAACCACATAATCGTAGAAGTTAAAGTGAACACAATGCGGAACTTATTAATCGATTTAAA
ATGAGCCGCATTCAGCTACAGCTCGACAAATACATCTTTGTTTTGACTATAACTAATTTC
AAAAGCGCGGTAATAAAAACCCCAAAGTTTAGTCGTTGTAAATTTAAAAGATATTAAACA
ATACGATAATAAACCGTTTACGTTCTCAATTTGACGGTTTATTTATTTGAAAATTCTAAT
GGGGTTATTATTCGAGATTTAAGGAAGCTTTTAATTGAAGCCTCTTGGTCCATAATGGTG
CACGTTAAAGTGATAGGCTAAAGAAAGCAACGCGGTGCGAATATCGAATAAATGTAGAAA
GATATCCCGTAGCGTTTGAGAGACAGGAAACCTTTCTACGTCCGCTAGTCAACGGGCCGA
CTCCATGAGTCTTTGACACTGAGTAAGGAGATACTTCTTCTGTTGTTCGTCATACAAAAA
TATGACTTTGCCCGAGCCCGAGCTAGAGAACATTCCCAGTACTTTCTTTTTGGCAGTCGG
TATGTACACGCCCTTCTGAACGGCTGTTGGCACCTCCGGGAGTTCCGTCCACAGATAGGT
CCAGACGATCTGCCATCCACCGAATACGTTGTTCTTCTCAAGGTACAGGATCCTCTTGTC
GGTACACACGACTACTTCCTTGGCGGGTATCACCCACACGTGGGCCTCGTATGTGTCTGT
GCTCACGTACTTACCCTTTTCAAGTTCGAACAACATCTTGTATCCTTCAGCATGCGACCT
CGAGTAAGGTCTGACTCCAGAATCAGCCGGCAAATATCTAGCAGCGCGACGTTTTGTTAT
CTCTTCAGACATATCAGCCGCCCTCTTTACAGCGTCAAGTGAACCTGAGGCGAAGTCTAC
GACCCCAGCAGTGGGCCTGGCGACCAACCCCACGGCGCCCTTGCCCAAACCCTTGAAAAA
CCCTTCGACGCCCTCCTCACGGGCGCCCTCTATGGGCTTTGTAAACACTCCCGTTACCCC
GTCGAATACGCCCATGACTAATCCCTTGCCGCTTCTGGCGAGGCCTTCTTGTAAATTAGC
CGGTGGTTTGTTAATGTTGTCACGGCGACGACGTTGGTAGTCCTTATCCAAAGACAGTGC
AGCGAGTCCGTGTCCCATAGCGCCAGTGATCCGCGACACAGCGCCGGCCGCGCCGCCCAC
CGTGTGTCCGACCAACGACCGCACTCCCAAGAACAGACCTTCCGCGAACTCACCCGGACC
TTGGATAGCACCCTGGAATGGTTCATAGAAAAGATCTTCGACTCCTTTCTTCAATCCGAC
CACTAATCCGTACGGGTTCCCGATCACATCCAAACCGAGCACCAAGACATATAGCTGTTT
GAGCGCTTGACCCGTGTAGTGACTTTGTACTTGACCTATCAACTCCTTTTGTGATAAGAA
CTCGTAGTTCCTTTCGTAGTATGACAATTTGAAAACAACATCATTCATATCGGTTAAAGT
GACCCCGATACTCTGTAGCACCGTGCCGACGAATGTGGGCAGTTGTGTGGCTCCACCAAG
CGAAAATGACACGTGGACCTTGAGTGGTGATAGATGTAGATTGTCATAGAAGTTCTTTTG
ATCAGAAGCGGCTCCTAACGCAGCCAAAGCTTCAAGCGGTTGTCCAGCTTTCTCTAAATC
TAGTCTGAATGCTTCCAGCGCTTCCTGTTCCGTGGGTACTTGTTGCGGGAACATCGCCAT
GAGTCCGTTGATGAGCCCCATGTCCACCTTCACGTGGAACTCCTGGATCAGCATCTTGTA
GTATTTGTACTGCCGGACCTTACTATGCTCCATTATTCGCTCTACTATTGATACTTCTAT
GAACGGTTTCATGCCATTAGGGTCGTCGTTAGCCACAGATCTCGGAGGCGGCACAGGCGC
CAACACCACAGGGAACGTCGGCAACGGCAGTTGTTGGTCTATCTGTAGTCGATGTAGTCT
TGCGTGAAGTCGTCGCGAATGTGGTGTGAGACAGTAGGAGGCCCACAGCCCGGCTTCTAG
CGTACGACGGAGCAGACGATGGTTCGGTTTTAGAAGACGCATCTCTTCGAAGTGGATCTC
TGTTTTCTCATCGATCTGTACGATAGGCGAGACTGGCGTATCGGAGACCATTTTATTAGC
CAAGTACTTCTGATAAGCTTCTTCGAACTGTGTGGCTCGCTGTCCGTCCAGCTTCTTATA
ACGACGCGCGCCTATTTTACATTGTTCCCATACGATGCCAGAATTCGATATACTGATATA
AACGATCTCCAGTAATTCATGATCGTTTACAAGCGACAATCCCATCCCCTGCATGGACAG
CACTATTTCAGTATCGACCAACTCGACCTCTCCTATAGAGTAGGCGCCGCTCGCTAGTAT
GGGGTCATCGGTGAACAGAATAACGCGTTGTAAACCATCCAAGAACGATACCCAGGATAT
GCGGTTAGTTTCGTTTATCATGAAATCGCCGATGCCGTCTTTTCGTAGATCGTTTTCGAT
TTCTTTACGTTTGTGTCCTTCGAATATAAGCGTGCGAGGTCCGGCTGGATTGTCCCACGT
GTAAAGCATTTTAGTCATCGATGGTAACTTCTTAACATTAACGTTTTCTTTTTCATAAAC
GGTGACAGTGTAAGGCGAGTAGTTGACGAGCAGAGCGGGCGCGTGACCGTCTCTGTACTG
TCGTATCGTGATGTACGTGCCGCCTTCACTTAGTTGTACCTCCACGTGTAAACCACCGTA
CTGATTGTTCAATTTCAAACAAACACTGTGTTGTTCAGTGTAGAGGAATGGTGCGGCGTA
TTCCGTGGAGCCCGCTACTCTTAGTAATAACAATTTGTCTTCTTTCTCTACGACCGGCCA
TAAAGGAGCGCTCGAGTTTTGACCAACCTC
(3510 bp)

- SilkBase 1999-2023 -