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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27256_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_calcium_homeostasis_endoplasmic_reticulum_protein_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0006874 P cellular calcium ion homeostasis
GO:0008285 P negative regulation of cell population proliferation
GO:0016020 C membrane
GO:0044325 F transmembrane transporter binding
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051209 P release of sequestered calcium ion into cytosol
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
Transcript
Level		FPKM:0.48 TPM:0.40
ORF EntryO_TrvaMG17645_3prime_partial:A_TrvaMG_comp27256_c1_seq2
Sequence
(Nucleotide)
CAAATGGCCGTTGTGTTAGCTGATAGAATTTAATGAATTTATCGCGTTTTCACGTCGGTT
TTTCATAAATGAAACTAGTGTAGTGGCTAAATAAGCTAAATATTATTTTTACGATTAACT
GACTTTACTATGATGAAAGTACTGGTTTCAGATAGTTGTTTGTGAAAGTAAACTTAACTT
CAGTAATAACCTCTTAATTTTACCACAATGGATCTTCCACAGCCCCCACAAGACCAAGAT
CTCCGCAACATAATCGACAAACTTGCGCAGTTCGTCGCAAGAAATGGACCGGAATTCGAG
AAGATGACCAAAACTAAACAAAAAGACAACCCAAAATTTAGTTTTCTATATGGTGGCGAG
TACTTCAACTACTACCAATACAAAGTGACGACAGAACAAGCAATTCTAAAGCAAACGGCC
GGTGGGCAGGCGGCATCCGCTCCCGCCGGGGCTTATATGGCACAGAACAGGCAATATGTA
ATGCCCCAACAGGGCGGCGCGACGCCTGCTCAACTGGGTCTCGCGGCCTCCATGGCGGCG
GCACCGGCGCTCCAGCAGTGGCTCGCAGTCAACTCAGCGCCGCCTCCCTTGCCTCAGCAT
CCCCCTGAAATGGACAACGTTGCAGCACAGATTGCTATACTTAAGGAACAAATCACTCAG
TCGGAAAATAATCTTAATGCTCAACATACCGTGTTGATACAACAACAGCAAGTGAAGATC
AATGAATTGGTCAGCAAGTCACAGATAGAATCCATACAGTTACTGGCTGATGACAACAAG
ATTAACCTGACAGAACTTGACAATATCCTACAGCCCATTATTGATAGCTGCACCAAAGAC
AGCATTTCTTCAGGCAAAGGCTGGATACTTCAGCATGCCACTTCCTTTGACGCTGGCAAG
GTTATATCTCAACATCTGCTCAGAAAAGTGACTCAGCCCGGTGCAGCGTTCACTCAGAAA
CTACACATCATTTACCTAGTCAACGATGTTCTGCATCATTGTGCACGCAAAAACGCTGAA
GATCTCAAGAAAAATTTGGAAAATGTGGTGGTTCCAATGTTTTGCAATGCCAGTATAGCG
GTGACGGAAGAGCAGGAGGCTAAGCTTAACAAATTACTTCGCCTTTGGGAGTCCAAGTCC
AACTATTTCGACACTTCGGTGATTGAGAAAATGAAGAGTCCAACCAGCTCCTATCAAGAG
TATCAGAACAGCCTAATCTCACAGCATTCTAATGCTATCTCTCATCTCACGCAGCAAACT
AAATCTACTTTTGAGAACTACCAATCACAACATCAAGCATTTGTTAGCCACGCAATGCAA
CAAATACAACAACTCGAGATGCAAAAGCACGCACTTGAGATGCAAAAAACTCAAGAAAAT
AATGAAAGTGCCCCAAAAAATAACATGAACAATTTCCACAATAGTAATTTTAGTGATATA
GGATACGCTCAAAGAGGTGGTTACGACCCAAACTTGAATACGAATTCAAATAGCCAGCAG
TTTGGCAGTGAATGTGGGGACAATTACGGAACAAATAATAGCATCAGTGGCAATGAAAAT
AGTTATGACAGCCAGATATTTGATCAAATTGCAAAGAAAAAAATGGAAAACAATGAAGAA
CCTGATTTATCTAATCTTCCAAACATCAACTTTTCCCTCCCACCGCCGGGTTTCAAACCG
ATTGAAAATCCACCACTTCAAGCTTTCCAAAATGGTCTCCCTGATCTGAGCAAACCTCCT
CCAGGGTTCCCACCGTTTCCTGAAGTTAATAATGAAGATCTTATGCCCTCAGTACCATAT
TTCGAACTACCCGCCGGTCTTATGGTCCCACTCATTATGCTGGAAGATGATAATTACAAA
CCTTTGGATCCAGACAGAATTCGATTGCCCCCTCCAGCACCACCAAATGAAAGACTTTTA
GCAGCTGTTGATGCTTTCTTTGCATCTCCTAATCATGAGCGGCCAAGAGACAATGAAGGG
TGGGAAAAATTAGGATTATACGAATATTATAAAGCGAAAAATTCAGCGCGAAAGATGAAA
GAAGATGCAATAGCACAAGGATTCAGACAAAAATCTAAGTCACCCAGTCCCATTCCTAAA
GATTTGCAGAAACAACCATCACCTCCAGGCAGACGATACAGATCAAGAAGTAAATCCCCA
GAAAATAATACACACAAGAGATCACGATCACGTTCAAAATCTCCCAAAAGAAAAAGCAGT
ACGTGGAAAAGAGAACGTGATAATGCAAGAGAAGCCCGACGGCGTACCAGGTCGAGATCA
AGATCACGCAGCAATTCCCGTGAGCGAGAAAGGCATAGAGATTCTCCGAGGTCGCGGCGT
GTAGAACGATCCAAGTCACCTACGCCACCCAGCTTCCTCGGAGGAGCATACCCCTCTACT
TCAGGTGGCATCGATTCTACGAACAAAGGGCATCAAATGCTGCAGAAAATGGGCTGGAGT
GCAGGCGGCCTCGGAGCGTCTGGTCAGGGCATCGCGGAACCAATCAGCGGCGGTATCGTC
AGAGATCGACAGGATCAGTATAAAGGTATCATCAATTTAATAGAAAATAACAAATTGAAG
ATCTGTGACAAACCATTTAGGCAAG
(2605 bp)

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