SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27243_c0_seq6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_calpain-A_isoform_X2_[Bombyx_mori]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:1.53 TPM:1.29
ORF EntryO_TrvaMG17477_complete:A_TrvaMG_comp27243_c0_seq6
Sequence
(Nucleotide)
CTCTGCAATGTCAGGGGACATTGACCTATTTAAATAAAATCGCAAAAGCATGTTTTTTCG
ATTTTTTGTTAATATTATGAATAACTTTTATTAACGTACAAGCGTATGGTCTTTTAGATA
TTAAATGGTTTTATAGATAGCAAATTTCGGCCATAATATATTAAACCACTCAACTGGGAA
CAGCCCAAAATTGGCATTCGTCTAACAGTGCCATATTTGACAACAGCCAAGTTAAAATCA
CTGAATACTTACAGATCAATTTCCTAATAAGCAAATATGAACACTTAGATAAAATTACAT
ATTAAAAAATATATATTTCTTATAAGTATAAGGCCGGTTTATAATAAATATAATTTATAA
TTTATTGAACAAGACTCGTGTTTAATGTGACCTATATTTTGTGGGATTGAAACATTTATT
GTTTAAGGTCAGTTGATGTTTTTATTGTGTTTAAGAGTATACTGTGCGATTCAGCCATTC
TTCAAGTGAAAAGGTAGCATAACCGCCACCCGATGATCGACTGTTGAATGTATCAATCAT
AGACTTGAGACGCACGGCGCACATTATGAAGTCATCAAACTGAATGTAGCCGTCGCTGGA
ACCGTATCTGTGCGCCAGAACGTTGAGCACGTGCGCGTTGACCGTGTAGCCGGCCGAGTG
CAGCGCGTCGCGGAGGTTCTGGGCGGGGATGGCGCCGCGACGCTCCACGTCGTACAGGCG
GAACACGGCCCTCCAATTACGCAGGTCAATCCAAAGCGACTTAAACTCTTCGAAGCCGAG
ACCGCCGGAGTTGTCTTTGTCAAGCATCGCGATCATGCTACGACACACGTCTTTAGAGAA
ACCCTGACCTTGCAGTTCTTGTGCATTAACATACGGCTGCGGCTGATTCAGGTGTACTTG
CTCGGGTTGATTCTGATTCTGGACCTGCTGTAGATCGACCCCCAGTTCCTTGCATATGGG
GGCACATAACGCGCACAGTAGCTGCTCGAGACAGCTCTGTTCCTGGGCCCCTTGCTGGGG
GCCTAGGGGGCCGGCTTGGGGGGCTTGAGGGGGCCGGCCTTGCCCCCCGCCCGGCACCCC
GCCGCCCCCGTCGTAAGCGCCGCGCGTCATCGCAAGTTCTTCCCTCATAGCGTAGTCGAG
GATCTCCTTGAGTTCCTGCCAGTCTACCTCGCCGTCGGATCCGGCGAGACGGTTGAAGAA
CTCTCGGACCGGATCTGCCGGTTCCGGATCCGGAGCTAATTCCTTCACCCTGTCATCAAC
GTCTCCCATACCGATATCTTCGTCATTTTCTGTCATGTTGTTGTCCTTTTCTGAGAAGAC
TCGGAGTAAGAATTCACCTTCCTCATCAGGGTCGAAGGTTGAGGGTACAATTACGTAGGA
ACCCGGCTCGAACTTGAACCGAGCACTGACTTCTCTCAAGTTAATGAACGCCTGTGACCG
TCCCACCGAAGCGTTGTACTTAAAGAAGTTGACGTCCAACGGTTTGGGGACTCGACCGTA
CTCCGGGAGACGGTAGATGGCGAACCCGATGGTGAGGCACTCTAGACCTTGGTGGCGTTG
GGAACGACGGTTCTTCTGCATCAGTGCTACGATTATGGTACACTTATTTTCATCATCTCC
TTCATCAGGGTCGGTGAGTGTGACGGTGTACTGCGGGTTGCGCCAGAACGTCTCCAGGAA
GTTCCTGCAACCACCAGCGGTCACCCCTCTCACCCATTCCCCTTCAAAGACAGACATCTC
CCATTTCTTAGTGCAGCCTTCGGGACACTCTTCAGGGTCCAATGAATCGGGGTTCAAGTT
ACAAATCTCCACTCTTGAGAAATGATTAACGAAATCCTTGAACGACATCCAGAATTCACC
GTCTTCATCAAACGTTAATCCGAGCTCTTCCTTCTCAGATTCGGGAATGAAACGCCATTC
AGGGGATTTGTCACTCCAAGGTCCGTTCCACTCGGCTTCGTTTCCCCAGGGGTTCCGGAG
CCTCAGCAGCGGTATCTTCCCGGCGCGGCCCGGGGTCTCGATGTCGACGTACTTGACGCG
GGTGACGGAGTACGCGTGCCCCCGGATGAGCCCGGCCGGGGTCTCCGCCTCCAGGATGTT
GGGGTCGGGCTCAATACTACATCCCATAAGCGAGTTCCTTTCATAAGCCTTCAATAATAT
AGTGTAGAAATTGGGCGGAAGTTCGGCGATCTCGTACATTTCCGTTACGCCCCCGGTGAA
ATCTTCCATTGCCTCGCACGTGGACCCGCCTTTGAGGGCCTCGTACGACCCGTGCAGTTT
AGCATAAGCCTTCTCGAGTAAAGCGCTCCAGAACTCGTTGGTCTCAGCCGAGTGCAGGTA
GACCAGCTTACCCCTGTAGGTGGGTAGACGGTCATCAATGACCACATCCACCCAACGGCC
GTATTGCCAGAAACGGAAATGGAAGACGCCTGCATAGTCCTCTTCGAAGCTCTGATCATC
TGGCACGACTTGGAAGAACAATTTGCGATGTAGCGTCAAGTTGGCCACGGCGGCCAACAG
CCAACAATCGCCCAACTCTCCTTGTTGGACGTCGAAACGACTGTATCCTTCCACGAACAG
TTGAGGGTTATCGCTTATTTCCCCAGGTCTCAGCCAAGTTATGGGCCTGTCCAGTCTCTC
CTTGTAGTAGAGACTGCGGTCCACAGCCGGGAACTCCGGGTCCTCGAACAGTCTACCATC
AGCTAGGCATCGCGACCTGATCTCCTTGAAGTCTTGATACGTGGCCGGACCGAACGAAGA
TGGACGGGTCTCGCCTAGCACTTTGTAATTTTTGATGCTCGGCAGAAACCTCTTCTGTTC
CACCTCTTTCTTTTGGAACACCTCATTGATGATATTGCCGATTGCTTGGGCGCCATATTG
AAGAAGAGCCTGACCTCCTTGGTTAAGCAACTGCTTTCCCGCGCCTTGTAAAAGGGCGCC
AAAATTTCCGCCATTTTGGCCCGCCATTGCGAGCACACACACTTTCACTACTACTCACTA
TTGTTATTTATTTCTTGCTAAGACATTTTGGACGTGATTTTTCGCTGTTTTTTCAACGAA
TTCCGCGAAATTTTAAC
(3077 bp)

- SilkBase 1999-2023 -