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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27243_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_calpain-A_isoform_X1_[Bombyx_mori]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006909 P phagocytosis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008340 P determination of adult lifespan
GO:0009953 P dorsal/ventral pattern formation
GO:0015629 C actin cytoskeleton
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0021919 P BMP signaling pathway involved in spinal cord dorsal/ventral patterning
GO:0030036 P actin cytoskeleton organization
GO:0042335 P cuticle development
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:1.18 TPM:0.99
ORF EntryO_TrvaMG17475_complete:A_TrvaMG_comp27243_c0_seq4
Sequence
(Nucleotide)
CTCTGCAATGTCAGGGGACATTGACCTATTTAAATAAAATCGCAAAAGCATGTTTTTTCG
ATTTTTTGTTAATATTATGAATAACTTTTATTAACGTACAAGCGTATGGTCTTTTAGATA
TTAAATGGTTTTATAGATAGCAAATTTCGGCCATAATATATTAAACCACTCAACTGGGAA
CAGCCCAAAATTGGCATTCGTCTAACAGTGCCATATTTGACAACAGCCAAGTTAAAATCA
CTGAATACTTACAGATCAATTTCCTAATAAGCAAATATGAACACTTAGATAAAATTACAT
ATTAAAAAATATATATTTCTTATAAGTATAAGGCCGGTTTATAATAAATATAATTTATAA
TTTATTGAACAAGACTCGTGTTTAATGTGACCTATATTTTGTGGGATTGAAACATTTATT
GTTTAAGGTCAGTTGATGTTTTTATTGTGTTTAAGAGTATACTGTGCGATTCAGCCATTC
TTCAAGTGAAAAGGTAGCATAACCGCCACCCGATGATCGACTGTTGAATGTATAATATTA
GCGCGTTTGTTGCGCGTGTGACGTCATCTCACGGCGCCCATTGCAGTTCACGCTCCAGAT
TCTCCAGGGGCTCGTTGTTCGCAATCATAGACTTGAGACGCACGGCGCACATTATGAAGT
CATCAAACTGAATGTAGCCGTCGCTGGAACCGTATCTGTGCGCCAGAACGTTGAGCACGT
GCGCGTTGACCGTGTAGCCGGCCGAGTGCAGCGCGTCGCGGAGGTTCTGGGCGGGGATGG
CGCCGCGACGCTCCACGTCGTACAGGCGGAACACGGCCCTCCAATTACGCAGGTCAATCC
AAAGCGACTTAAACTCTTCGAAGCCGAGACCGCCGGAGTTGTCTTTGTCAAGCATCGCGA
TCATGCTACGACACACGTCTTTAGAGAAACCCTGACCTTGCAGTTCTTGTGCATTAACAT
ACGGCTGCGGCTGATTCAGGTGTACTTGCTCGGGTTGATTCTGATTCTGGACCTGCTGTA
GATCGACCCCCAGTTCCTTGCATATGGGGGCACATAACGCGCACAGTAGCTGCTCGAGAC
AGCTCTGTTCCTGGGCCCCTTGCTGGGGGCCTAGGGGGCCGGCTTGGGGGGCTTGAGGGG
GCCGGCCTTGCCCCCCGCCCGGCACCCCGCCGCCCCCGTCGTAAGCGCCGCGCGTCATCG
CAAGTTCTTCCCTCATAGCGTAGTCGAGGATCTCCTTGAGTTCCTGCCAGTCTACCTCGC
CGTCGGATCCGGCGAGACGGTTGAAGAACTCTCGGACCGGATCTGCCGGTTCCGGATCCG
GAGCTAATTCCTTCACCCTGTCATCAACGTCTCCCATACCGATATCTTCGTCATTTTCTG
TCATGTTGTTGTCCTTTTCTGAGAAGACTCGGAGTAAGAATTCACCTTCCTCATCAGGGT
CGAAGGTTGAGGGTACAATTACGTAGGAACCCGGCTCGAACTTGAACCGAGCACTGACTT
CTCTCAAGTTAATGAACGCCTGTGACCGTCCCACCGAAGCGTTGTACTTAAAGAAGTTGA
CGTCCAACGGTTTGGGGACTCGACCGTACTCCGGGAGACGGTAGATGGCGAACCCGATGG
TGAGGCACTCTAGACCTTGGTGGCGTTGGGAACGACGGTTCTTCTGCATCAGTGCTACGA
TTATGGTACACTTATTTTCATCATCTCCTTCATCAGGGTCGGTGAGTGTGACGGTGTACT
GCGGGTTGCGCCAGAACGTCTCCAGGAAGTTCCTGCAACCACCAGCGGTCACCCCTCTCA
CCCATTCCCCTTCAAAGACAGACATCTCCCATTTCTTAGTGCAGCCTTCGGGACACTCTT
CAGGGTCCAATGAATCGGGGTTCAAGTTACAAATCTCCACTCTTGAGAAATGATTAACGA
AATCCTTGAACGACATCCAGAATTCACCGTCTTCATCAAACGTTAATCCGAGCTCTTCCT
TCTCAGATTCGGGAATGAAACGCCATTCAGGGGATTTGTCACTCCAAGGTCCGTTCCACT
CGGCTTCGTTTCCCCAGGGGTTCCGGAGCCTCAGCAGCGGTATCTTCCCGGCGCGGCCCG
GGGTCTCGATGTCGACGTACTTGACGCGGGTGACGGAGTACGCGTGCCCCCGGATGAGCC
CGGCCGGGGTCTCCGCCTCCAGGATGTTGGGGTCGGGCTCAATACTACATCCCATAAGCG
AGTTCCTTTCATAAGCCTTCAATAATATAGTGTAGAAATTGGGCGGAAGTTCGGCGATCT
CGTACATTTCCGTTACGCCCCCGGTGAAATCTTCCATTGCCTCGCACGTGGACCCGCCTT
TGAGGGCCTCGTACGACCCGTGCAGTTTAGCATAAGCCTTCTCGAGTAAAGCGCTCCAGA
ACTCGTTGGTCTCAGCCGAGTGCAGGTAGACCAGCTTACCCCTGTAGGTGGGTAGACGGT
CATCAATGACCACATCCACCCAACGGCCGTATTGCCAGAAACGGAAATGGAAGACGCCTG
CATAGTCCTCTTCGAAGCTCTGATCATCTGGCACGACTTGGAAGAACAATTTGCGATGTA
GCGTCAAGTTGGCCACGGCGGCCAACAGCCAACAATCGCCCAACTCTCCTTGTTGGACGT
CGAAACGACTGTATCCTTCCACGAACAGTTGAGGGTTATCGCTTATTTCCCCAGGTCTCA
GCCAAGTTATGGGCCTGTCCAGTCTCTCCTTGTAGTAGAGACTGCGGTCCACAGCCGGGA
ACTCCGGGTCCTCGAACAGTCTACCATCAGCTAGGCATCGCGACCTGATCTCCTTGAAGT
CTTGATACGTGGCCGGACCGAACGAAGATGGACGGGTCTCGCCTAGCACAGCCTGAACAT
TGACGGCAGCGCAGGCTTCTTCTATAACTTCTTCCACAGCTCCATTCTCATATTCTTCGG
CCGGCAAAGCTGGGTACAACTTAACACCACTGAAAGAAGCGTCATCCTCACTAGGCAGTT
TAGGGTACAGACTCCCGTTGCCTATCAGGGGCTCGGCGCTCCCCCCGCGTTCTATATTCA
AAAACCCGTTGACAGCTGAGGCGGCTTTCCCGCCACGATGCCAACCCCAGCCGTTAGCTT
TAAAATTTTTCGGATAGCTAAACATTGTACTTTCACCGCTCAAACTATTTGAATCACTGC
ACGACCGCTCTTAAACGCGTCTAGACGACGAATGCTGAATTCAGCTGAATCAAAACGACC
CGAAAAGTCCGCTCGAGATAGAGCGAATGAATTACTGAATGATGAATCAGTGCGAATTGT
GATTATTTTGCGTTTTGTGAATATTGTCCACTTCAAG
(3337 bp)

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