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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27243_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_calpain-B-like_isoform_X1_[Papilio_polytes]
Ontology
GO:0004198 F calcium-dependent cysteine-type endopeptidase activity
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0007298 P border follicle cell migration
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016540 P protein autoprocessing
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.78 TPM:1.50
ORF EntryO_TrvaMG17471_complete:A_TrvaMG_comp27243_c0_seq1
Sequence
(Nucleotide)
CTCTGCAATGTCAGGGGACATTGACCTATTTAAATAAAATCGCAAAAGCATGTTTTTTCG
ATTTTTTGTTAATATTATGAATAACTTTTATTAACGTACAAGCGTATGGTCTTTTAGATA
TTAAATGGTTTTATAGATAGCAAATTTCGGCCATAATATATTAAACCACTCAACTGGGAA
CAGCCCAAAATTGGCATTCGTCTAACAGTGCCATATTTGACAACAGCCAAGTTAAAATCA
CTGAATACTTACAGATCAATTTCCTAATAAGCAAATATGAACACTTAGATAAAATTACAT
ATTAAAAAATATATATTTCTTATAAGTATAAGGCCGGTTTATAATAAATATAATTTATAA
TTTATTGAACAAGACTCGTGTTTAATGTGACCTATATTTTGTGGGATTGAAACATTTATT
GTTTAAGGTCAGTTGATGTTTTTATTGTGTTTAAGAGTATACTGTGCGATTCAGCCATTC
TTCAAGTGAAAAGGTAGCATAACCGCCACCCGATGATCGACTGTTGAATGTATCAATCAT
AGACTTGAGACGCACGGCGCACATTATGAAGTCATCAAACTGAATGTAGCCGTCGCTGGA
ACCGTATCTGTGCGCCAGAACGTTGAGCACGTGCGCGTTGACCGTGTAGCCGGCCGAGTG
CAGCGCGTCGCGGAGGTTCTGGGCGGGGATGGCGCCGCGACGCTCCACGTCGTACAGGCG
GAACACGGCCCTCCAATTACGCAGGTCAATCCAAAGCGACTTAAACTCTTCGAAGCCGAG
ACCGCCGGAGTTGTCTTTGTCAAGCATCGCGATCATGCTACGACACACGTCTTTAGAGAA
ACCCTGACCTTGCAGTTCTTCCCTCATAGCGTAGTCGAGGATCTCCTTGAGTTCCTGCCA
GTCTACCTCGCCGTCGGATCCGGCGAGACGGTTGAAGAACTCTCGGACCGGATCTGCCGG
TTCCGGATCCGGAGCTAATTCCTTCACCCTGTCATCAACGTCTCCCATACCGATATCTTC
GTCATTTTCTGTCATGTTGTTGTCCTTTTCTGAGAAGACTCGGAGTAAGAATTCACCTTC
CTCATCAGGGTCGAAGGTTGAGGGTACAATTACGTAGGAACCCGGCTCGAACTTGAACCG
AGCACTGACTTCTCTCAAGTTAATGAACGCCTGTGACCGTCCCACCGAAGCGTTGTACTT
AAAGAAGTTGACGTCCAACGGTTTGGGGACTCGACCGTACTCCGGGAGACGGTAGATGGC
GAACCCGATGGTGAGGCACTCTAGACCTTGGTGGCGTTGGGAACGACGGTTCTTCTGCAT
CAGTGCTACGATTATGGTACACTTATTTTCATCATCTCCTTCATCAGGGTCGGTGAGTGT
GACGGTGTACTGCGGGTTGCGCCAGAACGTCTCCAGGAAGTTCCTGCAACCACCAGCGGT
CACCCCTCTCACCCATTCCCCTTCAAAGACAGACATCTCCCATTTCTTAGTGCAGCCTTC
GGGACACTCTTCAGGGTCCAATGAATCGGGGTTCAAGTTACAAATCTCCACTCTTGAGAA
ATGATTAACGAAATCCTTGAACGACATCCAGAATTCACCGTCTTCATCAAACGTTAATCC
GAGCTCTTCCTTCTCAGATTCGGGAATGAAACGCCATTCAGGGGATTTGTCACTCCAAGG
TCCGTTCCACTCGGCTTCGTTTCCCCAGGGGTTCCGGAGCCTCAGCAGCGGTATCTTCCC
GGCGCGGCCCGGGGTCTCGATGTCGACGTACTTGACGCGGGTGACGGAGTACGCGTGCCC
CCGGATGAGCCCGGCCGGGGTCTCCGCCTCCAGGATGTTGGGGTCGGGCTCAATACTACA
TCCCATAAGCGAGTTCCTTTCATAAGCCTTCAATAATATAGTGTAGAAATTGGGCGGAAG
TTCGGCGATCTCGTACATTTCCGTTACGCCCCCGGTGAAATCTTCCATTGCCTCGCACGT
GGACCCGCCTTTGAGGGCCTCGTACGACCCGTGCAGTTTAGCATAAGCCTTCTCGAGTAA
AGCGCTCCAGAACTCGTTGGTCTCAGCCGAGTGCAGGTAGACCAGCTTACCCCTGTAGGT
GGGTAGACGGTCATCAATGACCACATCCACCCAACGGCCGTATTGCCAGAAACGGAAATG
GAAGACGCCTGCATAGTCCTCTTCGAAGCTCTGATCATCTGGCACGACTTGGAAGAACAA
TTTGCGATGTAGCGTCAAGTTGGCCACGGCGGCCAACAGCCAACAATCGCCCAACTCTCC
TTGTTGGACGTCGAAACGACTGTATCCTTCCACGAACAGTTGAGGGTTATCGCTTATTTC
CCCAGGTCTCAGCCAAGTTATGGGCCTGTCCAGTCTCTCCTTGTAGTAGAGACTGCGGTC
CACAGCCGGGAACTCCGGGTCCTCGAACAGTCTACCATCAGCTAGGCATCGCGACCTGAT
CTCCTTGAAGTCTTGATACGTGGCCGGACCGAACGAAGATGGACGGGTCTCGCCTAGCAC
AGCCTGAACATTGACGGCAGCGCAGGCTTCTTCTATAACTTCTTCCACAGCTCCATTCTC
ATATTCTTCGGCCGGCAAAGCTGGGTACAACTTAACACCACTGAAAGAAGCGTCATCCTC
ACTAGGCAGTTTAGGGTACAGACTCCCGTTGCCTATCAGGGGCTCGGCGCTCCCCCCGCG
TTCTATATTCAAAAACCCGTTGACAGCTGAGGCGGCTTTCCCGCCACGATGCCAACCCCA
GCCGTTAGCTTTAAAATTTTTCGGATAGCTAAACATTGTACTTTCACCGCTCAAACTATT
TGAATCACTGCACGACCGCTCTTAAACGCGTCTAGACGACGAATGCTGAATTCAGCTGAA
TCAAAACGACCCGAAAAGTCCGCTCGAGATAGAGCGAATGAATTACTGAATGATGAATCA
GTGCGAATTGTGATTATTTTGCGTTTTGTGAATATTGTCCACTTCAAG
(2988 bp)

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