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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27231_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_daughterless_isoform_X4_[Amyelois_transitella]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001012 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007422 P peripheral nervous system development
GO:0007423 P sensory organ development
GO:0007530 P sex determination
GO:0007541 P sex determination, primary response to X:A ratio
GO:0008134 F transcription factor binding
GO:0008407 P chaeta morphogenesis
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030707 P ovarian follicle cell development
GO:0035019 P somatic stem cell population maintenance
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045464 P R8 cell fate specification
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0048477 P oogenesis
GO:0048663 P neuron fate commitment
GO:0061101 P neuroendocrine cell differentiation
GO:0061382 P Malpighian tubule tip cell differentiation
Transcript
Level		FPKM:1.43 TPM:1.21
ORF EntryO_TrvaMG17386_5prime_partial:A_TrvaMG_comp27231_c0_seq3
Sequence
(Nucleotide)
CGACGAGCGATGACGAGCCTATGCATTTATATGAAGTTTTTCAAAATTGTTTCAATAAAA
TAGCAAATAAACAACAAGTCACAGAAAAGGCAGGATACCAATCACCATATGGAGGCATGG
ATAATGGAATGTACGGGGTGGCGGCGACCTCGTGCACGGCGACGAACGGTCACCACCAGT
CGGACAGGAGGCACCTTCACCATCAGCACGCGGACGTCCCGCCGCAATGGTACGGCAGCG
ATGAATTCGGTCACGACTCGCCGAGTCGGTACGCGTCGCCGAAGGGGGCCGGCGCGGGGG
CGTCCTACCAGGAGCCCTACTACGCGGCGGGGGGCGGTGAGTGGGCCGCCGGATACTACC
AGCCGCCGCCGCCGTATCACCATGACCCCTATGCTACGTCGCCGGGTATAGCGGGTGGCG
CGGTGAGCGGCGAGGCGACGGGCGGCGGCGCGGAGCTCCCCTTGCCGCCGATGTCGTCGT
TCCGAGCCGCCGCGCCGCACCACTCGCCCACCGACCCCATGCTCGTCGCCAAGCCGCCGC
TACAACCGATGTACGGAGGCGGTGCCAGCACTCCCACAGTGGTCGGTCCCGAGGGAAGCG
TGTCGTCGTACTCGTCGCCGTCGACGCCGGTGCACTCGCCGCCCCCGCTACACGCGCGCC
TCTACCCGCTCAAACACGAACACGTCGCGCACGCCGTGCCGCCCGCGCAGCAAGCAGGCT
GGTCGGGTCCTGGCGTTTCCTCTCCCCCCTCTGGGGCCACCCCCCTCGCCAACGGACATC
CACACGTAGCCGTCTACCCTCCTAATGTAATGGGCGCTCCGGAACAGCGACAACTGGACG
AGGCGATGGTGTTCTTACGCGAGCATTCCGATGTTGTTGGTGCTCGCATGGAGGAGCGAT
TAGACGACGCGATCAACGTGCTCCGGAACCACGCCGAGGCGCCCGACCTCTACCCGCACG
AGATGCACCAACCGACCACAGTGACGCGACTGGGCGTGGCGACGGCGATACCACATCTAC
ACAACGAACCGCCCGTCAAAATGGAAAGACATATACTACCTAATACAAAAAAACGTAAAG
AACCGGTGGATTCAGGGTTGGATTCGAAACCTTCCTCGTCCGGCTCGGCCGACCTCGCCC
TACACAAGCCGCCCTCCAACAAACGATCGCGGAGATACTGTTCGTCGGCGGACGAGGACG
ACGTGGACCCCGACACCAAGGCGGCGCGCGAGCGGGAACGCAGGCAGGCCAACAATGTTA
GGGAGAGGATAAGAATAAGGGATATAAACGAAGCTCTCAAGGAATTAGGCAGGATGTGTA
TGACACATTTAAAAAGCGACAAGCCACAGACTAAATTAGGGATCCTCAATATGGCCGTGG
AAGTCATTATGACCCTCGAGCAACAAGTTAGAGAACGTAATCTGAATCCCAAAGCGGCGT
GTCTGAAGCGTCGCGAGGAGGAGAAGGCGGAGGAGGCGCCCAAACTACTCGCCGCGCCGC
TACAACACTACCAACCCATGCCCGGTATGGGCCAACTACCGGGCCAGCCCCCGACGGGCC
CCCCGCAACAATAGCGACGTCCCCCGCCGCACTAGCACTGACCCCTAAGGCCCCTTAAAA
GCCCCCAAATTATCCCCTTGTCCCCCTACAGCTGGCTACACATACTATTGTATGACGTCA
CATTTATTGTTAAATTCCCGTTGATCGGGAGAATGGGATACTATATTATTTTATTATTTT
TAAAGTCAGCTGTTCTCTTACGTTTTACCCAAAGACGGCAGTGCAGTGAAAAACGGACTT
TTTTAGTGTATAAGTGTGTATAATATTAGTTATAAGATTATACATATAGGTATATATACA
TATTATATATATGAAATTATACATTTTCTCGGCGGTGATTTTTTTCACTGCGTTAAAAAA
AGTATTTTGAATTCATTTTTTTGAAGTGTGAGCAATGATGTTGTTTATGTTTGAGAAACA
CTGAGTTTAAATGAAAATAATAATTCAATTATTTTACTCATAATTTTAATTCAATTTTTA
TTTTATGCATTTTACACATAAAACACAGTTTTAATTATAATTGTATTTACGATATAAATA
ACATCATTTTTCATACACATGTCTTAACTTAAAG
(2134 bp)

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