SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27218_c1_seq10
Scaffold_id
NCBI non-redundant
(nr)		tubulointerstitial_nephritis_antigen_precursor_[Bombyx_mori]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0005044 F scavenger receptor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006898 P receptor-mediated endocytosis
GO:0006955 P immune response
GO:0007155 P cell adhesion
GO:0008234 F cysteine-type peptidase activity
GO:0016197 P endosomal transport
GO:0030247 F polysaccharide binding
GO:0031012 C extracellular matrix
GO:0043236 F laminin binding
GO:0051603 P proteolysis involved in cellular protein catabolic process
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.44 TPM:2.90
ORF EntryO_TrvaMG17331_complete:A_TrvaMG_comp27218_c1_seq10
Sequence
(Nucleotide)
CTTTGATCATGTGGACGTCAGAAATGTAAATTTAAAACATCTGAGTGTTTTTTCGTGGTT
TCAATACTGAAGCAGTCATGGCTAATATTGTGTTCCTACTATTAGTCCTGGCATTAGTGA
CATCCTGCTTAGGATATAGTGCTCCCGAACTTCGACAGCAGTCGTATTGTGCTACACGAG
CTGACAAATGCTGTACTAAACGAGAAGATGACTGTTCAGTGCCCATAGCTGGAACGCTCT
GTTACTGCGACGAGTTCTGCAAACATTCTGCTCACCACGATGACTGCTGTCCGGATTACG
AGAGAGTCTGCGGCTTACCTGATCTGGGATCACCAACTTGTGAATACAATGGACAGAAAT
ACGATCTTAATGCCGAACTACGTCAAGACTGTAATCTTTGCAAATGCCAGTTAGTTGGAT
CTGGTGTCGCAGCCTGGACTTGTGACAACGAACCTTGCATAAACAACGAAGACTTAGCAT
ATGGCGTCAACCAATTCGGTTTGCCGTGGAAAGCTACGACCTACCAGCAGTTCGAAGGGA
AGAAACTCAAAGATGGACTCATTTATAAACTAGGTACTTTCCCGCAGAACATGACCGTCA
TCAGCTATGACAAGGATATCGACTATCCGACTGAGTTCGACGCGAGACGGGTATGGCCCG
GTATCATCACCCCCGTGGTGGACCAGGGCTGGTGTGGCTCCGACTGGGCCGTGTCCATAG
CTGGTGTCGTTGGAGACAGATATTCTATTCAATCAATGCAGAGGAGAAACCAAAGACTGA
GTCCACAGACTCTTCTTTCGTGTAATTCTAGGAAGCAGTATGGCTGCAAGGGAGGCAATC
TGGACATTGCCTTTGACTACGTCCGGAGTGAGGGTCTGGTCCGTGAGGAGTGCTTCCCGT
ACGAGGGCGAGGTGACGGAGTGCTCTGACCGCGGCTGCGAGCGATACAAGGTCGGAGTGC
CCATGAGCATCAACAGGGAGGAGGACATCATGTACGATATAATGACCTCAGGACCTGCTC
TTGCCGTGATGAACGTGTACCAAGACTTCTTCCACTACAAGGAAGGAGTATACCGACACA
CGAGACACGGAGACCAGTCCCAAAGACGCCTTCACAGCGTCAGGATCGTGGGCTGGGGCG
AGAACGATCTGGACAAGTACTGGATCGTCGCAAACACCTGGGGTCCTTCCTGGGGCGAGA
ATGGCTACTTCAGAATCGCTCGTCGGTACAGCGGGACGGATATCGAATCATCTGTCATCA
CAGTCTTACCTTACGTATAAAATTAAATTATGTAGTCTAATAGATAACACGTCATACGAA
TACATGGTGGAATTTTTCAATATAGTCTAACGCGTTCGCTGCGAAACGAGGCCTAAATGA
CCCCTCCTGCAACTATTCTGTGGTGCGGCAAGGAAAAACGAGCGGTGCAAAGAGTGTAAC
TTTATTAAAGGCGTTGGGGTCTAATAGACCGCGTGTCGTCTAACGT
(1486 bp)

- SilkBase 1999-2023 -