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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27209_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		putative_DNA_repair_protein_xp-e_[Danaus_plexippus]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016567 P protein ubiquitination
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031464 C Cul4A-RING E3 ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
Transcript
Level		FPKM:6.78 TPM:5.71
ORF EntryO_TrvaMG17290_5prime_partial:A_TrvaMG_comp27209_c0_seq3
Sequence
(Nucleotide)
TGCACATCAATATTTTTTTATTGAAATTCAAAAATTACTCATACATTTATTATTACAATT
TGTGAACTTAGTCATGCAAGATATTGTAACCTATCATCTAAATTTAATATTTCGATTACT
ACCTAATTCCTAACATAATACTACAGATTTTATGAGACACTTTCAACTAAAACAGAGAGT
AGATTGTGCGCATAAAAAGTTGCACAACATTATCAGAAAAAAAAAATCAAATTTTTCAAC
ATTTCTATTGATATTCTCTTCATACTGTTATCTTGATGTTTACCTTCATGTCAAATATTA
AATTAAAATTAATTAAGAACATAAGTGCATTCAAACAAACATTTCTAAGCATAAACTCTA
TAATCTATTGACCTCACAACATCAAAATCTATAATCAAAAATCTAATTTGTATAAAAAAT
CGGCAACTACTAAACATTTAGAACGAATTCACATTTAAAATTAATCGATTCTAAAATGTT
TCGAATATCGATTTAATCGATATCACTCAATCATTCGTTGATCTTGCACGACTGAGTTCA
CAGTACATAGTTTAAGTATAATTCATTCAATGTATCCTCGTTAGGTCTTCAACTATTTTA
ATTAGGTCGTCTATTTTAGCATCACGCATCATTCCACTACCGTCATCAATCGCCAGTCCT
TTAACGATATCCTGTTGCACATCCCTGGAGAGATCCAGGAACGTTTCTATGAGATCTCCG
TCGACGAACCCCTCCGCGGGCTCCGTCTTGATGTCCGTGTTGAACGAGCGCCAGAACGAG
TGCGGTATACGACCCACTGACTTGATAGAGTGAGATAGACGCTCTTCCACTTTCTGTAGG
AACTCGAATAGCTCTTGCGATATCTGAGCTACTA
(874 bp)

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