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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27192_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_14676_[Danaus_plexippus]
Ontology
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
Transcript
Level		FPKM:7.47 TPM:6.28
ORF EntryO_TrvaMG17144_5prime_partial:A_TrvaMG_comp27192_c0_seq1
Sequence
(Nucleotide)
AATTATTCGCACACCCCTAGTATTCAACATCTCTTATAGTTACATTAGTGAAGATTCATG
TCGCTAAAAAACTTAATGGTAGGGCAGATAGGAAATTTACGACAAACACCAGTCAGATTT
CACATTTTCAAGATATGTTGCAACTGTACATTTTATTTAGTCTGGGCATTTTTCAACCCG
GTCACACTACTCACGTTAAAACAATAATTATGCTAATATAGCCAAACCGTTAGCAAAATT
CGCATTTAAAATATTAGATTTAAAAAATTCCATACTATAATGTGATATAAATTCACAATC
ACAACACCAATTAACGTTTATTTTCAATAATTATACCATTATAATATTTTGAGATATCGA
GTCACGTCGCACATGCAATCCTTTTATTTAAAATAACTAAGCGAAATAGGAAGGAGGCGC
TGTGAGATCAGCCAACATATCCAATTCATCTTCAGTAAGTTGGTCTCGATGTTTGGGCCA
ATCGTCTTGATGTGTTCGTCTAAAATCGGCCAAGGTCTTTCTTATCGTCGCCGGGATCGG
ATCTGGTGCGTTTGTGTGTCGAGATAGTTCTGCCAACACGTCTCCAAACTTGGGTCCAAT
GCTGTAAGGCCTAGAGGCGAGGTACGCGCACATACCGAGCACGCCGAAGTGTCTGTCAAC
CAACTGTTTGGATCGAGCGCTGCGTATGAACAAACATAGCGTCTTGTCTTCGTCGGGGAG
AGCGTGGCAATGCATCAGACCCGTCAACAGATTGGAAGCAGATTGACGTACCTCTAGACG
TGGATCCCGCATAAGTTTCAGTGTGAATTGTTCAGCTCGTGTTTTTCTCTCCGGCTTTTC
GCACAGGTATGGTAGTCCGTAAAACAAGAAAGGCTCAGCAAAGTCTAGGCACGCCAGTCG
CGCCCACCACGAATTTCCTGTAGTGATGGTGTCAATGAGTTGTGTGACGTCATCGAACGC
GCTGACGGTCCGTCCGTGCAGCGCCAGCACGGACAGGTAGACGGTGGAGGCGCGCGCCAG
CTCGTCCAGCGGCGAGCCCCGCGCCGCGCACCCGCACGCCGCGCGCAGCATCACGCGCAC
GCCGGGACTCGGCGACACGGCGCGCACGCACACGCCCGCGCAGCTGCGGAACACTGTAGT
TAGCAGACTAATAGCCCTAGCGTGATCTTTGGGTTGCGGTCTGACAACGGGCGCGTCAGC
CGACAAGGGGAACGTAGTATCGAGTCGCTCCACTAGCGGCTTCTCCAGGCGACTGTGAAC
TATCGACCCGTCTTCTGTGTCTACAGGTTCGGACTGTGCAGTATCGTCGCTGACGGGTGC
GTCGCTCTCCGGCGACAGTCTGGCGACGCGCACGGGCAGCTGGCCGCTCAGGGAGTTCCT
GGGCCGACTGGTGGAGCCACTGGGCTGTGTAGCTTCTGTGTGACCTGATGTTTGTATCGA
CGGAGATGTTAGCGATATCACAATATCACCGTTTTCATCATACAACGGAGCCAACCTCGG
TTGTATGGATTGTAAGAACTCAGTGAGACACAGCGAGTAACCAGTGGGTCCGCCGGGAAA
CACCAATTCATAATCAAACATTACTGTTAGCAAACTTCCTATACTTTCCCGTACATTTTG
ATAAGGATGTTGTATGAAGTTTGCAGCATCTAACTTCTTTAGTATGATCTGTGTGAGTGG
CGCAGCTCGCCATCTCATTGCATTTATTATTCCCTGTAAAGCAAGTAGCCTAGCGCACAC
AATAAACGATGCATTCTGATCGTGTACATCATCTGCTTTAGCCGGCGGCGGGATGGCCAG
CTCCATGATGCCCTCCACCACGAGAGCGGCGCGGTGCGGATCCATCTTGTCCATGCCGGT
GGCGAGCGCCGTGCCCCAGTCGTCCACCGTCTCTGGCGTTACTGACGTTAGACCTATTTT
GAATATATCAAGTGCTCCTTTATACATTAGTATCGCGTCATCTCTGCGCCAGTACCGCGG
CGCCCGGAGCACGGCGGAGGCGACCTCGGCCGCGAACCGCTGTAGTTGCTCGCGAGCTCC
GGCCGCGCACACCGTCGCTTGCTTTATGAACTTGTCCACCATTGAAGGCCCGTAGTGGGT
GAATATGAACTTGAACAATGCGAATCTGTAACCGTTAAATTTATCCTTGCCCTTCTTTTC
TTCGCTAGTGAGAAACTTGACAAACTTCTTCATAGTGTCCGGATTATCGAATAATTCATA
CAAGTACAATTCATCTTCGTCCATTTGTTCAGGAGGAGTAAAATTACAACATGTCTGTTC
CTTTAAAGGCGCAGCTACTTGTAGTTTCTCAGGCCACATATAAAACCCATTAGCGGAACT
CCTGAGCCACGGTCTGTCCCATTCTTCATCATTCTTTGGTATTTTATCTTCCGACCATAA
AACCCACTCCAAGTCTTTTCTGAACCCTGGTATATGTTTATCGGGACGCGGTGCGCCCGC
CAACTCGTACGGATCGACGAGTATTTTTTTCAACGGTTTCTTGCGTTGTCGGAGAGCGTA
TAAGGTCAGTTTTTGAGCAGTTTTGCGAACCGTGACGTCATCGTGGATCATGAACTGAGC
GCCGATACGAAGCGCACGTGACGGGTACGGAGTTTGTAACGACGGACACGATACCATCAA
GTTTAGAGTCAATATGAGGCGACGCCATTGTATATTTGGTGTTTCAGCTATATTAATCAA
TTCCATCATGAGCTCATTATACAACGCCTCGTTTTTATCAGAAAACGCATTTTCTTTTTC
GACGGCTTTTTCTAACTGTTGCTTGAATTTTGTATCGTTAAGTTGTTCTTCAGTTAGAAA
TGTTTTGGCGGCGTCTATTGCAGCCTGTGGCATTACCAAACGAGTGTTGACAGTCGGGAA
ATTTCGACGTACCGAATCACTGAATAATTGTTCCAATCTAAGAATGCTCAGTTTTTCACT
AAGAGGGGCTTTAAGCACAGCAGGCCATAGTACTTTGGCCACTTCCCAATCTTGTTTAGC
GACGAGTGGTGCGGCCCTTGGACCAAGTATCATAAACAATATTCCTTTGTGGATAGCGTG
CCATTCTTCACCTTCTCCGCCTTTGAGAAGCGTTTCGGCCAATTTTGGCACTAACAAACG
ATACGAGTACGGAAAATGATTTAACATCCAATAAAGTCTCATTTGGGCTAATATTCGCAC
CGTCGTATAAGGGTTGATAGCCAGCTGAGCTAGCGCCTGCAGGGCTGTGTACGCCGAGCT
AGTGATGCCCGCCTCGCACGCCAGCTCTGCCCTGGACTCGTCGTGGAGCCTGGTGGCCTC
AGCAGTCAGCATCCTGAGTCGCAGGCTGCCCGCCCCGCCCAGCTTGTCCCGGGGCCCGCC
GCGCCCGTCCATCATGCGGTCCATGGTCGTGTACGAATGTAAGCGAGTCTCTAAACTGTG
GTCGCTTCGTGAATTCTTCTTTATTATGACGCGTTCCCATACCTG
(3465 bp)

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