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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27190_c3_seq8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_myosin-7B_isoform_X2_[Papilio_xuthus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007309 P oocyte axis specification
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007312 P oocyte nucleus migration involved in oocyte dorsal/ventral axis specification
GO:0007314 P oocyte anterior/posterior axis specification
GO:0008103 P oocyte microtubule cytoskeleton polarization
GO:0008298 P intracellular mRNA localization
GO:0016325 P oocyte microtubule cytoskeleton organization
GO:0017137 F small GTPase binding
GO:0019233 P sensory perception of pain
GO:0030100 P regulation of endocytosis
GO:0030154 P cell differentiation
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0032050 F clathrin heavy chain binding
GO:0045502 F dynein complex binding
GO:0048477 P oogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0050658 P RNA transport
GO:0051028 P mRNA transport
GO:0070727 P cellular macromolecule localization
GO:2000302 P positive regulation of synaptic vesicle exocytosis
GO:2000370 P positive regulation of clathrin-dependent endocytosis
Transcript
Level		FPKM:7.98 TPM:6.72
ORF EntryO_TrvaMG17120_3prime_partial:A_TrvaMG_comp27190_c3_seq8
Sequence
(Nucleotide)
GCGAGTCGCAGCAGCTGGTTGAGGGTCTTCTTCTCGTCCTCGGCTCCGGCGAGCGCCTGC
GTCAGCTCGTCCACCTGCGTCACGTACTCCTCGCAGCGAGCCGCGAACATTGCACGCAAA
CTCGAGAACGTAGCGGCATCTTCCTTGAGCAGACGCAGCTCGTTCCTGAGCTTGAGCATG
GTCTCGGTGACGATGGTCTTCTCCGTCTCGTACTTGGACTTGAGGTTGGCGAGCGCGACC
TCCGCCGTGTTCTTGTTGGACTTGAGGACGGTGCGCAGGGTGGCGATCTGTTCGCGCTTT
GTGGACAGCAGGGACTTCAGCTTGATCACTTGCTCTTGCAGGTCGGCTAACTCTGCGCCG
CGTTCTTCTGTCTCCATCATGTGCGGCTGCCTGGTCCTGGAGCCGAGTGCGGTGTCGAGC
GCGGCCCGCAGATGGTCGAGCTGGTCGATGAGCGTGTCGGCGGCGCGCGCCACGCCGGGG
GCCGCTCGCAGCCCCTCCAGCGGGCCCTCCGCTAACGCCAGGGCTTCGGATTCAGCGTCT
GATACGCCGCCTTCGCTGCCTGAACGGACTTCGCGACCGTCAGCATGTTCCAATAACAAT
CTCTCGGGTTGTGTGCCGTTGATGGCGCACAGGTGATGGTAGATCTGAGCGAGGGACTCC
GCCGCGGACTGGAGGGCCGGGGCTGCGGTCGATAGGGCTCTGCCCGCACCTCCAGCGAGC
GTCCTGAGCAGGTCCGCCTCCGCAGTGAGGTGTTGCGCGCGTAGTTCCGCCTCGGCGACC
CTGTCAGCGAGGTCGGCGAGCGCGTGTCTGTTGATGGCGGCGGCGGTGTCGGCGGAGGGG
GCGGCGCCCAGCAGCTCGTGTAGGGCTCCGCTGAGGGCCTGCAGCTCGCCGCCGGAGACG
CGCCACCAGGAGAGCCAGGCACTGGCGCGACTCTTGCCGTCTCCTTCCTCAGGCGCGCAG
TCGGTGTGCAGTTTGACGAGCGCCTGCGCCCGGGCGAGCGCGCGCGTGACGCCGGTGCGG
AGCGCCTCGGCCGCCGCGCCCGCCGCCTCCGCCGCACTCGTCGCCGAACGAGACGACGCG
CAGAGCTGACTGTTTTCATTATGCGCCTGTTCCAGCTGCTTCTCTAATCTGGATATCTCG
TGCAGGTGCACCTCCGAGAACAGGTCGGCGTGGTGGTCCGCCATCGCCGTGGCCAGCTCC
GCTGAGGAACCGCCCGCCTCGCCCTCGTCCTCCGTGCCATCTTCAGGCATACCTCGTATA
CTATAGGCGAGGTTAGTAATGTTGTACGCGGCCTCCTTGCTAAGATGCGCGTCGAGTTCC
TTCTTGGCCGCGAACTTGGCTTCTCTCTCCGCTTGTAACGCTTCAAGCGCTTCAGCGAGT
TGTCGCTCAGCGATGCGGCGCAGTGCTGCGGTTTCCTCAGCTGTCGCTCGAGCGTTCTCC
GCCTCTTCGCGGAGCTGACGGGCTTCATATTTTAGACCTTCGAATTCGACCTGTGACGAC
CTCAAGGCCGAGACTTGCTTCTGCAGCGATATATTCTCGTCTTCAAGATCAGCTATATCG
CTCAGGAACCTCTGTTCGCGTCGCCTCGCCTCCCTCAGCTCAGCTCTAAGGGCCGCGCGT
TCTGATTCCCGCGTGGCCTTGTCCGCGCCTAGCTCCGAGCTCTCTGTGAGCAGGCGATCC
CGCTCGCTGACCACGCGGTCTAACTCGTGACGTAGCTGTTTCGTTTCCCCCTCGAGTTCA
AGTATCTGTAGAGTGAGGGAGCTCTCCATGGCGGCTGATTCGTTGAGGAGAGCATTTTCT
TGTTCTATACCACTCTGCGTTGTTACCTTCTGTGATGAGTCTAATTTCATAAGAGCCTCT
TGTGTGATGTCCAGTTCGTGTTTCGTGTTCTCGTACAAGCTCTCGAGTTCGTCGCATCGT
TGCTGCAAGGCGCTCTTCTCCTCCAGGAGCACCAGGCCGAGCTGAGCCGACTGGATCTTC
TCGCTGCTGGCCTGATCGAGCTCTCGACCAAGCCTGTCGATCTCAGCCTTCAGCTCGGCC
ACCGATAGCTCGCTATGAGCCGTGGCTGCCATCGTGACAGATAAACGGCTGTGTGTATTT
AAACTTCATAAACAAAGTAAACAATCTCAGAAAAACAACTAATAAATAACGTGTAGAATC
AATTGTTTCTACATTCTCCCGAGGGTAAAACGTCTTGACAGCTCATTTTGAG
(2212 bp)

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