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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27187_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_ras-responsive_element-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007265 P Ras protein signal transduction
GO:0007275 P multicellular organism development
GO:0010634 P positive regulation of epithelial cell migration
GO:0016604 C nuclear body
GO:0016607 C nuclear speck
GO:0033601 P positive regulation of mammary gland epithelial cell proliferation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1903691 P positive regulation of wound healing, spreading of epidermal cells
GO:2000394 P positive regulation of lamellipodium morphogenesis
Transcript
Level		FPKM:4.52 TPM:3.81
ORF EntryO_TrvaMG17106_3prime_partial:A_TrvaMG_comp27187_c0_seq1
Sequence
(Nucleotide)
CGGCGCGCCGCTCTCGACCAATCACCGGCCGTGTCTTGCTCCCCCGAGAGCAGAGCGACA
GTGCGTGCTCTCATCACGATCACAAGGAGACGGCATCTCGCCGCGCGAGGTTGTCGTCTG
CTCGAGATGAGCTCACCCACGAGTCGCGCGCTTTTACACATTCAAATATTGTGACCTCAG
TGTTAAAGAACTGTGCTCGAAATTAAGGTGATCTGTGAAAGACTAGATAGTGAGATCGAA
CTATTAAATTGTTTAGCGGGCAGACTGATATCGCGAAAATAATCCACAATTGGTCGCCGT
CGAGGATTACCTAAGGCCATGCAGGGCGCAGCAAACGCACCAGCGCCCTCAGCGGCTGAA
CCACCTTCGTCGCAACAAATCAAAACAGAGAACATCAGCGAGGCTAAAATCGAAGCCGAC
GAGGAAATGGATAAAGTGAAAATAGAACAGGAAATGAGAAACCGTACGACTAGCATTGAC
AGCGACAATAGGTCGGACAGAAGCGACGATGAGGACGGCAGAAGAGCGCGGAAGCGGGCC
GCGTCCACATCTCTTTCTCCCATCCCGATGGACAAGAGAACAGCTCGCTTTGAGTGCCCA
AAATGTCGACAACGATTCGACAATGTCAACGCCTTTGACATCCATCGCTTCACAGCCCAC
GGAGATGAATCCCGAACAGGCTACGGTGACATCAGCATCGATTTCTCAACTAAGAAGATC
CCTGAAATCATCCGTGCCAGAAACCACGTTGCATCCGCGGAACAACGATATAGATGTGAC
TCCTGCACTCGGGAATTCCCGAATGCTCAATCTTTCGATATTCATAGAAAAACATGCACA
CCGAGTCGTGGTTTGAGCCCAGTCAGAGATAGACGGGAGGAGTTCTTAGCTAATCTAGAT
CTGCGGACCAAAAAATTTGGTATTCCAGGCACGTTGACCCCACCGATGGAGAGATTTGTA
ACGAAGTTCGAAGATGGTCATTTGCCTTCTAATGGTATACGACATATCGATGCGGCACGA
GATTTGGCGGACATTCAATCGATACTCAACGTCACGTCCGCTGGAAGTCTTCTCGAAAGA
TTAACTGGAAATAGGGTGGCTTTAGAAAGCGCTGTTCTAACCCCTCCCGATACTGTTGTC
AAAGAAAGAGAGCCCGAAGAAACCCAAGACAACTTTGCAGCTGAGTTCAGAAGAATGAAG
CTCAGAGGAGAATTCCCTTGTCGACTATGTCCAGCTAAATTTCCTAATCTGAGAGCGTTA
AAAGGTCATAACAGAGTGCACTTAAGTGGGACAGGACCGGGCCCTTATCAGTGTAACATG
TGTCCACACGCATCTTTAGATAAGGCGGCTTTAGTCAGACACATGAGAACTCATAACGGT
GACCGTCCGTATGAGTGTGCGGTGTGTAATTACGCCTTTACTACAAAAGCGAACTGTGAA
AGACATTTACGGAATAGACATGCTAAAGTAACGCGCGAAGATGTTAAGCGTTCGATAATT
TACCATCCATCTGAAGATCCGAACAATGATGAAGTTAATTCAAAACTTGCTCGGGATGAA
GTAAAGAGGTCCCTCGCATTCCACACTCCAGATATTGACAGAAGAAATGAAAATACTGGA
CGCGTTACACCTTTAACTCATTTCACACCCAGTTTTATAACTGAAAGACACCCTGTTACG
ACCCTTACAGCGAAACCTTTGCCTGAAACACCGCTGTTAAGAGAATCTGACCGTCCAACA
CCAAGGATCACAGTAAGAGGGATTAGCCAATTAAACCAAATTCCTGAATTTCGTTCCCCC
GAACAAAATTATAAAACAAATGATACTCATTCTGAGACGTATGAAGAAGACGCCCCGGTT
GACCTAAGTACTAGCGACAATAACAGTTGTGATGTGCTTGATCTTAGCAAAAAGAAACGT
GACACTGATGATGAAAGTAAAGCTCCTGTTCGTCCATCCTTTGAACCTGATGCTGCGTCT
GTTGCTGCTTCGGCATTTGAAAAAACTAGACTACTGCTAGCTCAACAAAGACTTTTTGAA
ACATCCCTCCCAAAAATTGACCCAGCCTACTATGCTACTCATTTGTCTCAAATATACGCC
GGCGCTGTGCCAGGTATCCCTGGACTACCTCTACCTCCTTCTTTTCCTTACTTTCTTCAA
CCATCTTTTTTTCCTCACCCCTCTGACACTAAAGAACTTGCCGAAATAAAGCAGCGTATT
CAAAAGGAAATTATTCGTGGGCTAAGTATGTCTGGTGGAAGGCTTGTACCTAACGAACAA
GAGAT
(2285 bp)

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