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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27181_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_transport_protein_Sec24C_isoform_X1_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:34.76 TPM:29.26
ORF EntryO_TrvaMG17044_5prime_partial:A_TrvaMG_comp27181_c0_seq3
Sequence
(Nucleotide)
CTCAGGGTATGCCCGGGCAGATGCCGCCAGCAAGTCAACCGCAGGGTATGCCTGGACAAA
TGCCACCTCATTCTCAAGGTGGCTTTCCACAGCAACCAGCTCCAGGAAGGCCAGGAATGC
CAGTTAATCAACCTAAACCGGGAATGATGCCACAACCCGGAGGAATGCCTCAACAAGGTC
CACCACAGCCTCAGCCTGGAGTACTGCCACCTGGTGGACCGCAGTCGAGGCCTGGTCCTA
TGCCTGGACAGCCAGGACCTCAACAACAGCCATTAGGCCCTCAGCCTGGTGGGCAACAAC
CAGGTTTACCCCCACAACCTGGGCCAATGCCGGGTCAACTACCATCACAACCAGGTCAAC
CTAATCAAGGTCCTCATGGCCCACCAACAAACCAAGGCTTAAGTTCACAACCTGGAATGC
CTCCGCAGCCTGGTCTTCCACAACAGCCAGGACAACGACAGCAATTACCTCCCCATATGA
ACCAGCAAGGCATACCTACTAGTCAACCTGGGTTCCAACAACCCGGGCAAATGCTATCTC
ATCCTGGGCAACCAGGGTTCCCACCGCAACCTGGACCACCTGGTGTGCAAGCTCAACCAG
GACAACTGGGCTTACAATCTCAACCAGGGCAACCTGGTTTAACTCAACCTGGGCTACCTC
CACAACCTGGTCAACCTCAAGGGCTTCCACACAGTCATCCCGGATTTAATCCTCAATCAG
GGCTTCCACCTCAACCGGGCTTACCTCAACAACCTGGTTATGGCCCGCAAGGCCCGTACC
AACAGATGGGCGGTATGCCTCATATGCCACCTCCATTAAGTCAACAGAGACAGTTTGCCA
ATCCTCCTGCCCAGCCGGGATACGGGCCTCCAGGACAACCTGCTGGTGGTTTTCCTGGTA
TGCCTCCCCTACCTCCACAAAGCCATGCCCAGCAGTATCAAGCCCAGCAGTCGGGGTACC
CACCTCAGTTCCAGCCTCCCTTCCCGGGTCAACAGCCCAGCTACCCTGGGCAACAGTACC
AGCAGCCACAGAAGACGCTTGACCCGGATCAGATGCCTAGCCCGATCGAGGTAATGTTAG
ATGACCAGCAGAACCGCGGCGGTGTGTTTGTGACGAACGGTAAAGGTCTCGTTCCACCGC
TGGTCACCACCGATTTCATTGTGGATGATAAAGGAAACGCCAGTCCTCGCTACATCAGGA
GTTCCATGTACACAATACCGGTGACAGCTGATCTGTTGAAACAAACCGCGATGCCATTCT
GTTTGGTTGTATCCCCAATGGCAGAGACAATAGGCCAAGAGCTGGAGCCTCCCCTGCTAG
ACTTCGCGGCTCTGACGGGCTCCCCCACGATGGGTCCGGTGCGCTGCAGCCGGTGCAAGG
CCTACATGTGTCCCAGCATGAAGTTCGTGGATGCAGGACGCCATTTTAAATGCGCATTCT
GTAAAGCTACAACAGAAGTACCAATGGAGTACACTCAGTACGTGAACAGCATGCAGCAGT
ACGGACGCGTGCCCGCAGAGATGGCGCTCGGAGCGTACGAGATCGTCGCCACCAAGGAGT
ACTGCAGGAACAACACTCTGCCCAACCCGCCGGCCATCGTGTTCGTGATCGACGTGTCGT
ACAACGCCGTCAAGAACGGACTCGTCGACACCGTCTGCGAGAACATTCTGGACATCATCG
ACGAATTACCGAAAGACGATCAAGGGAAGAGTTACACTCGCGTTGGATTCATAACATACA
GTTCTACAGTTCATTTCTACAATATCAAGGGCACCCTAGGCCAAGCCCAGATGCTGTCGG
TGGGCGACGTGTGCGACATGTTCGTGCCCATCCTGGAAGGGTTCCTGGAGCGAGCCGAGG
ACAGCGGCTCGGTGCTGTCGTCCCTGCTGCAGCAGATCCCCGTCATGTTCAAGGATAATA
AGGAGACGGAGACGGTCATGTTGCCTGCTGTTCAGGCCGGTCTGGAAGCCCTAAAAGCAG
CGGAGACGTCGGGTCAGCTGTTCGTGTTCCACACGTCGCTGCCCACATACAATGCGCCCG
GCAAGCTCGCCAACAGGGAGGACAGGAAGCTGCTCGGCACCGACAAGGAGAAACAGATAT
TAGCCCCTCAGAACACGTCGTACAACGAGCTCGGCCAGGCGTGCTCGGCCGCCGGCGTGG
CGGTGCACGTGTTCGCGGCCAACAACGCATACATCGACACCGCCACCATCGGACAGCTGC
CCCGGCTCACCGGGGGACAACTCTACAAATACACTTACTTTACTGCGGAGAGCGACGGCT
CCCGTTTGATGTGGGACGTGCGTCGCGCCGCGCTACGTCCCGCCGCGCACGACGCCGTCA
TGCGGGTGCGCACCTCCACCGGCGTGCGCCCCACCGACTTCTACGGACATCTCTACATGT
CCAACACTACTGACGTCGAGCTCGCTGTTATAGACGCCGACAAAGCGATAGGAATAGAAA
TAAAACACGACGACAAGCTAACGGGCGAAGACGGCGTCTACATACAAGCCGCGCTACTGT
ACACGCACCGCTCCGGACAGAGGAGGCTGCGCATCCTGAACCTGGCGCTGAATGTAGCCC
ACCAGCTCGCCGACGTGTACCGGAGCATGGAGCTGGACACCTGCATCAACTTCCTTACTA
AACAGGCCGTGTGGTCCATCCGCGAGACGGGCGGGCGAGCGGCGCGACAGGCGCTCAGTG
CGCGGTGTGCGCGCTCCCTCGCCGCCTACAGGAGACACTGCGCCTCGCCCTCCGCCGCCG
GACAGCTGGTGCTGCCCGAGTCCATGAAGCTGCTGCCGCTCTACACCAGCTGTCTGCTGC
GCTCCGACGCGCTGGCCGGCGGTCCCGACATCACGTGCGACGACCGCTCGTGCGCGATGT
ACCGCGCGCTGACGGCCGACGTGAGCACGTCCGTGGTGTACACCTACCCTCGCCTGCTCC
CGCTGCACAAGCTGGCGGACTCGCCCGACGCGCGCCTCACTCCGCTGCGGGCCTCCATAG
ACAAGATGAACGAGTTCGGAGTTTATTTGTTAGAGAACGGCGTCCACATGCTCCTATGGG
TGGGCTCCCAAGCCTCCCCTGACTTCCTGCGCGACGTGTTCGGTGTGACGTCACCGCAGC
AGATCGAGCCCGCGGTGTGCGAGCTGCCCTCCCTCGACACGCCGCTCAGCCGCCACGTCA
GGACGCTGCTGCAGCGGGCCAGGAGGGACAGGAGGGTGTGTATGAGGTTGCTTGTGGTCC
ACCAGTACGACAAACAAGAACTCCAGCTCCGGAGGATGCTGGTCGAGGACAGAGCCATTG
ATGGAACGGAATCCTACACCGAGTATCTCTTGGCCGTTCACAAACAGATACAGAAAATGA
TCTAACAATAATGCGACAACACGACAAATTAGAAACCGTATTACGTCACTTCCTGGTCGA
GGACCGCGGCGTGGACGGAAGTGCGTCATACGTCGACTTCCTGTGCCACGTCCACAAGGA
GATCCGACAATTACTATAGCATGAAAAAGAAATCTCTAGGACATACGTTCCTAGGAGGAG
ATATTAAAACTTCGATGGGAAAAGACATAATATTTGCATTTTTTTAAAGTAATAGCACTG
GTATGCTTATTCAGAGGTCAATTTGAAGAGAAGTATATTTTATTATCTGTGAAACTATGC
TTAAGATTAACTTTTAGATGCGGGTATCTACAAAGTAAGCCGTTGTGAGTCGACTTCTGT
GCTATATACGCCATTGATAAATAAGTCACAGGAACAATAAAATTATGATTTTAATGTACT
TTTCCCTTGTACTGAACAACTTGTATAAAAATGTCAGAAAAACGACTTAAAATTACAATA
AGCACCTATTTATATTGGATCTTACGATGTGCCTATTTCCCTCTAGTTTCATAAGAATGG
CGCATTTCATTTGAAAACAAATTCGCGCCAAAAATGTTTTATTCCGTGTACCGATTCGCA
TGTAACCTTAGCTTTAGTTCTGATGTTTGAATACTAAACAAATCATTCGAATTGTTAAAT
CGATTCTGACAGTATCGATTTTAAATGAAGTTCGATTTTTTAGTATTCTAACATAGCGTT
TGGGGTTTGCCTAAGGAGTATCAAGTTATTAGTGAATACAATTTTTTTTTCCATATCTTA
TTATGTATACAGGGTGATACTAGAATTGTGGTACAAATTGAAGGAGGGTGATAAATACTC
GATTTTGATATAAAATATACAGGGTGTCTCATGACTGACATGTTCAATTAAATTTTCACG
TTATTTTGAAACCATGTATGTTTGGAGGGATTTTTTTGCCTCGTAGGAAGACGAGCTACC
AGATCGTAAGCGGTCACCTTTGCTCATGGACCTCTATTACATTGTCAGGAGACACTGCGA
GGCCGCTACCTTCGGCTTATTTTTCTAAATTGTTCTTTCTATTGACGTTATAAAGTACAA
GGTGTAGTTTTTCCCGATTTTGTTAGTTACATTTTCCGACGAACCAAACAATTTATGAAG
AAACTTTGAACACAGTTATTAAAAATGATGCCCTTTCATGTCGCATAGTCCTGGGACACC
CTGTATATCAACTAACATGACCTTGAATATGTACCATATAATTTTACACCCTGTATTCTG
CGGTGTGTGGCCCCTTTAAAAGTGGCACAACACTGAAAACCTTGTTAACTACAGTATTTT
AGAACTAACAAAAATGGTTTATCTTGCTATACTGACAAAGTAAAATAAGACCATTTTTGT
TTGGTATAAAATTAAATATTACTATGGCGGACCCGTAATTAGTTAGTTCTGTTATTATTA
TGTAATGTTCTTAGTTATTAATTGTTATAAAGGAGTCTGGAATTGTAAATAAAATATATT
TGAATTATTTTTTAAAAAAAAAAAAAAAAA
(4890 bp)

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