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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27181_c0_seq10
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_transport_protein_Sec24C_isoform_X1_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0002474 P antigen processing and presentation of peptide antigen via MHC class I
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0012507 C ER to Golgi transport vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030127 C COPII vesicle coat
GO:0048208 P COPII vesicle coating
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:17.25 TPM:14.52
ORF EntryO_TrvaMG17048_complete:A_TrvaMG_comp27181_c0_seq10
Sequence
(Nucleotide)
ATTTGAAATAAATGATTTGACTTTACTTTTTCCAGGAATTACCGAAAGACGATCAAGGGA
AGAGTTACACTCGCGTTGGATTCATAACATACAGTTCTACAGTTCATTTCTACAATATCA
AGGGCACCCTAGGCCAAGCCCAGATGCTGTCGGTGGGCGACGTGTGCGACATGTTCGTGC
CCATCCTGGAAGGGTTCCTGGAGCGAGCCGAGGACAGCGGCTCGGTGCTGTCGTCCCTGC
TGCAGCAGATCCCCGTCATGTTCAAGGATAATAAGGAGACGGAGACGGTCATGTTGCCTG
CTGTTCAGGCCGGTCTGGAAGCCCTAAAAGCAGCGGAGACGTCGGGTCAGCTGTTCGTGT
TCCACACGTCGCTGCCCACATACAATGCGCCCGGCAAGCTCGCCAACAGGGAGGACAGGA
AGCTGCTCGGCACCGACAAGGAGAAACAGATATTAGCCCCTCAGAACACGTCGTACAACG
AGCTCGGCCAGGCGTGCTCGGCCGCCGGCGTGGCGGTGCACGTGTTCGCGGCCAACAACG
CATACATCGACACCGCCACCATCGGACAGCTGCCCCGGCTCACCGGGGGACAACTCTACA
AATACACTTACTTTACTGCGGAGAGCGACGGCTCCCGTTTGATGTGGGACGTGCGTCGCG
CCGCGCTACGTCCCGCCGCGCACGACGCCGTCATGCGGGTGCGCACCTCCACCGGCGTGC
GCCCCACCGACTTCTACGGACATCTCTACATGTCCAACACTACTGACGTCGAGCTCGCTG
TTATAGACGCCGACAAAGCGATAGGAATAGAAATAAAACACGACGACAAGCTAACGGGCG
AAGACGGCGTCTACATACAAGCCGCGCTACTGTACACGCACCGCTCCGGACAGAGGAGGC
TGCGCATCCTGAACCTGGCGCTGAATGTAGCCCACCAGCTCGCCGACGTGTACCGGAGCA
TGGAGCTGGACACCTGCATCAACTTCCTTACTAAACAGGCCGTGTGGTCCATCCGCGAGA
CGGGCGGGCGAGCGGCGCGACAGGCGCTCAGTGCGCGGTGTGCGCGCTCCCTCGCCGCCT
ACAGGAGACACTGCGCCTCGCCCTCCGCCGCCGGACAGCTGGTGCTGCCCGAGTCCATGA
AGCTGCTGCCGCTCTACACCAGCTGTCTGCTGCGCTCCGACGCGCTGGCCGGCGGTCCCG
ACATCACGTGCGACGACCGCTCGTGCGCGATGTACCGCGCGCTGACGGCCGACGTGAGCA
CGTCCGTGGTGTACACCTACCCTCGCCTGCTCCCGCTGCACAAGCTGGCGGACTCGCCCG
ACGCGCGCCTCACTCCGCTGCGGGCCTCCATAGACAAGATGAACGAGTTCGGAGTTTATT
TGTTAGAGAACGGCGTCCACATGCTCCTATGGGTGGGCTCCCAAGCCTCCCCTGACTTCC
TGCGCGACGTGTTCGGTGTGACGTCACCGCAGCAGATCGAGCCCGCGGTGTGCGAGCTGC
CCTCCCTCGACACGCCGCTCAGCCGCCACGTCAGGACGCTGCTGCAGCGGGCCAGGAGGG
ACAGGAGGGTGTGTATGAGGTTGCTTGTGGTCCACCAGTACGACAAACAAGAACTCCAGC
TCCGGAGGATGCTGGTCGAGGACAGAGCCATTGATGGAACGGAATCCTACACCGAGTATC
TCTTGGCCGTTCACAAACAGATACAGAAAATGATCTAACAATAATGCGACAACACGACAA
ATTAGAAACCGTATTACGTCACTTCCTGGTCGAGGACCGCGGCGTGGACGGAAGTGCGTC
ATACGTCGACTTCCTGTGCCACGTCCACAAGGAGATCCGACAATTACTATAGCATGAAAA
AGAAATCTCTAGGACATACGTTCCTAGGAGGAGATATTAAAACTTCGATGGGAAAAGACA
TAATATTTGCATTTTTTTAAAGTAATAGCACTGGTATGCTTATTCAGAGGTCAATTTGAA
GAGAAGTATATTTTATTATCTGTGAAACTATGCTTAAGATTAACTTTTAGATGCGGGTAT
CTACAAAGTAAGCCGTTGTGAGTCGACTTCTGTGCTATATACGCCATTGATAAATAAGTC
ACAGGAACAATAAAATTATGATTTTAATGTACTTTTCCCTTGTACTGAACAACTTGTATA
AAAATGTCAGAAAAACGACTTAAAATTACAATAAGCACCTATTTATATTGGATCTTACGA
TGTGCCTATTTCCCTCTAGTTTCATAAGAATGGCGCATTTCATTTGAAAACAAATTCGCG
CCAAAAATGTTTTATTCCGTGTACCGATTCGCATGTAACCTTAGCTTTAGTTCTGATGTT
TGAATACTAAACAAATCATTCGAATTGTTAAATCGATTCTGACAGTATCGATTTTAAATG
AAGTTCGATTTTTTAGTATTCTAACATAGCGTTTGGGGTTTGCCTAAGGAGTATCAAGTT
ATTAGTGAATACAATTTTTTTTTCCATATCTTATTATGTATACAGGGTGATACTAGAATT
GTGGTACAAATTGAAGGAGGGTGATAAATACTCGATTTTGATATAAAATATACAGGGTGT
CTCATGACTGACATGTTCAATTAAATTTTCACGTTATTTTGAAACCATGTATGTTTGGAG
GGATTTTTTTGCCTCGTAGGAAGACGAGCTACCAGATCGTAAGCGGTCACCTTTGCTCAT
GGACCTCTATTACATTGTCAGGAGACACTGCGAGGCCGCTACCTTCGGCTTATTTTTCTA
AATTGTTCTTTCTATTGACGTTATAAAGTACAAGGTGTAGTTTTTCCCGATTTTGTTAGT
TACATTTTCCGACGAACCAAACAATTTATGAAGAAACTTTGAACACAGTTATTAAAAATG
ATGCCCTTTCATGTCGCATAGTCCTGGGACACCCTGTATATCAACTAACATGACCTTGAA
TATGTACCATATAATTTTACACCCTGTATTCTGCGGTGTGTGGCCCCTTTAAAAGTGGCA
CAACACTGAAAACCTTGTTAACTACAGTATTTTAGAACTAACAAAAATGGTTTATCTTGC
TATACTGACAAAGTAAAATAAGACCATTTTTGTTTGGTATAAAATTAAATATTACTATGG
CGGACCCGTAATTAGTTAGTTCTGTTATTATTATGTAATGTTCTTAGTTATTAATTGTTA
TAAAGGAGTCTGGAATTGTAAATAAAATATATTTGAATTATTTTTTAAAAAAAAAAAAAA
AAA
(3243 bp)

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