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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27169_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_copper-transporting_ATPase_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005524 F ATP binding
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0006882 P cellular zinc ion homeostasis
GO:0007595 P lactation
GO:0007623 P circadian rhythm
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0010043 P response to zinc ion
GO:0015677 P copper ion import
GO:0015680 P protein maturation by copper ion transfer
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0030001 P metal ion transport
GO:0032588 C trans-Golgi network membrane
GO:0035434 P copper ion transmembrane transport
GO:0043682 F P-type divalent copper transporter activity
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051208 P sequestering of calcium ion
GO:0051591 P response to cAMP
GO:0060003 P copper ion export
Transcript
Level		FPKM:0.36 TPM:0.30
ORF EntryO_TrvaMG16913_complete:A_TrvaMG_comp27169_c1_seq4
Sequence
(Nucleotide)
CGAATTATTCGCACACCCCTAATGTGTTTTTTTAACAACATTATGTGATATCCATTTCTC
CTATACCAGTGCTGTCCTATTAAGAAAATTATCGTTTTTTTCACTGTTTAGATAGAGATG
TGAATCACACTCTGTTTCCTAAAACGTATTAACTTCGTTTATCAATTATTAGGACAACGC
TGTATTGAGAATATTAATTTATACATTTTTAAGTGTTGTTGATAAACAATAAAAAAACAT
CAAATCACCGAATTTATTTTACTTCGTTTAAAATTTATTTTCTAATAAACTTTTACTTAA
TGTAATGTTCCAATGTTTTTTCGTTATAATTGTGATACTTTCTTACATACTAAGCAGGCA
CAAGCATTTACACAAGGCTTAACAAAAACATTGGTACAGAGAGCCACATTCTTAATTATA
ATATCATTATTTTTTGTAAGTAACTGATTCATGCAACTTCTTCTGCGTCACAAAAGATAA
GTGAAATGTTTAGTTATGTTTAGTTAGCTGCAGTTTGTTTGGTTGTTTGAACGTGCTAAT
CTCAGGAACTTCTGGTTCGATTTGAAAAATTCTTTCATTGTTGGAAAGTCTATTTATCGA
GGAAGGCTATATAGGCTATGTTGTATCCCTCTGTGACGCAGACGAAATTGTGCTATTCAA
CTAATATTCAGCTAATTTGACTTTACATCGTGATTAATTTTGCCATAAATAAACCAATTT
CGGTTACTATTAATTATATTATAATTCGAATTCGGAACACCCTGTATCTCCAGTGTATTG
TTAGAATGAGATAGAGCTATAGTGGTCTACTGTGTGTGAAAGAGACAACATGCTGTCACG
CGGTGTGAAATACCAGCGTCTGGATGACCAGGAGATTGGGGACCACGATCAGGACCTGGT
TGCAGTAAGGGTTCCCATCAATGGCATGACGTGCCAGTCCTGTGTTAGGAGCATAGAAGG
TTCCGTGAGAGATATACCAGGAGTCGACCACGTCAAGGTGGAATTATTAGAACACGCCGG
CTACATCAGATATGACCCTCGGCTGTGTTCGCTGGAAGGGCTCAAAACTCACATAGAGGA
CATGGGCTTCGAAGTTCCGTCAGACCACGATGATGAGAGCAGAAATCTCCTTCCAAAAGA
AGTGCCAACAGTTGATTTGTTAGATATGCTTGGAAATCAAACTAGTGAAGTCTTCCTTTC
CGTAATAGGAATGACATGTCAGTCCTGTGTCAACACGATAGAAGGAGCATTAAGTACTAA
GAACGGTGTCACAAACGGCAAGGTATCATTACCAGATAATACGGCCCGTGTTAATTATAC
TCCTAGTATTATATCGCCAAAAGAAATAGCAGATCTGATATATGAATTGGGATTCGATGT
CAGCATTATATCTGTAGATGGACAAGTGTATACAGAGAATAAGTCACAAATTTACAACGA
CAAAGAAGGTTCAGGCGATTGCGTCAAATCTTCACCGCTCAAAAACAAACTTCAAACTAA
TGGTTCAGGTCCACCAGTTGCTGAAACTGAATTATCACGATGTACTTTAGAAGTAAGAGG
AATGACTTGCGCCAGTTGCGTTTCTGCTATAGAAAAACACTGCTCGAAAATATACGGGGT
ACATTCAGTACTTATAGCTCTTTTAGCGGCCAAAGCAGAGGTATGTTATGAACCTCTAAA
AATATCAGCATTGGATATAGCCAATTCGATATCAGAATTAGGTTTTCCTTCTGAAGTTAT
AAGCGAAAATGATGGCAGTGGTTTTAAAGAGATACATCTATTTATAAAAGGCATGACATG
TGCATCATGTGTCAGTAAAATCGAGAAGACGGTACTTAAACTGACTGGAGTTGAATCGTG
TGCTGTCGCTTTGACAACTAGCAAAGGTCGCGTAAAATATAATTCAGAACAAATAGGGCC
TAGGACGATATGTGAAGCTATAAATAGCCTCGGCTTTGAGGCTTCGGTAGCCAGTCCTCA
TAATAGAGGGGAGACAAGCTATCTAGAGCATAGAGAGGAAATAAAAAAATGGCGTAACGC
ATTCCTAATTTCACTATTATTTGGGGGCCCATGTATGGGTGCAATGGCGTATTTTATGAG
CACAATGCCTCCAGGACACAGCGCTAAGGATATGTGCTGTGTGTTCCCAGGATTGAGCTT
GGAGAATTTAATCATGTTTCTGCTGGCAACACCGGTTCAGTTTATCGGAGGCTGGCATTT
TTACAAGCAGGCTTATAAAGCTCTTAGACACGGAACTACAAATATGGACGTCCTTATTGC
TATGACAACTACAATAAGCTACGTATACTCCTTAGCAGTGGTGATAGCATCAATGGCTAC
TTTACAAGATGTATCACCTGTCACATTCTTTGACACGCCACCAATGTTGTTAGTGTTCGT
ATCTTTGGGACGATGGCTCGAACATATAGCTAAGGGTAAAACATCAGAAGATCTATCGAA
ATTATTATCATTGAAAGCAACTGAAGCAGTTTTGGTAACTCTTGATGAGTCAGGTAATAT
CCTCAATGAGAAGTGTATTCCTGTTGACCTGGTGGAAAGGGGTGATGTTTTAAAGGTTGT
ACCAGGAGCGAAAGTCCCAGTTGATGGTAAAGTGGTATCGGGACAGACTATGTGCGATGA
ATCATTGATTACTGGTGAATCTATGCCCGTACCTAAAACTAAAGATTCCCTAGTAATCGG
GGGTAGCATAAACGCGAACGGGGCAGTGTTGATGTTAGCCACGCACACAGGGGAGAGTTC
TACATTAGCTCAGATAGTAAGATTGGTAGAGAGCGCTCAAAGCAGTAAGGCGCCCGTACA
GAGGTTGGCTGACACTATGGCTGGGTATTTCGTGCCCCTAGTGGTATTTTTATCCGTACT
GACGTTGGTCTGTTGGATCATAAGTGGTGCTTTGGACATTGACAGAATAAAAGCTATAAC
TCCTGAAGTGTACCGACACGCTGGCTACTCTAACTGGGAGCTCATCGTCCAATCAGCGTT
TCATTTCGCCTTGTCAGTGCTTGCGATAGCTTGTCCATGCGCGCTTGGACTCGCCACGCC
AACGGCTGTGATGGTCGCCACGGGGGTTGGCGCCAACATGGGACTCCTTATAAAGGGGGC
TGAACCGTTGGAGAACGCTCATAAGGTAAAAACAGTGATATTCGATAAAACGGGTACAAT
AACAAGAGGTTGTACGACAGTCGCTAAATTATGTTTGTTTACCGGAGATGTAACAACACT
ACCAGATATAATAGCGTGTCTACTCGCCGCCGAACGCAATTCGGAACACCCTGTAGCTTC
GGCAATAGTACAATGGTGCAGTGTAGTACTAAAAGGCGCTAATCATGTCAAATGCACCGG
GTTCTTAGCCGCGGCCGGATGTGGTCTTAGAGCTAAAGTGAAATTAACTCAACATACGGA
CAGACAGCTTGACAACTTGGTGAATAACGAGACGCCCGGCAGTACGTTTGATCTTCACGG
CGTTCCCGTAGAAATTGTAGCCGATTCTGATGATGTAGCTTTAAGCTCTGCCCAAGCCGC
TATGAGGTTAAACAGATTGATCACTACTGATGGTGGGGATGAGAGCGAACACATAGTTTT
AATAGGTAACAGAGAGTGGATGTCTCGTAACGGAATAAGTGTTCCCCGGCCGGTACAAAA
AGCGTTGAACGATCACGAAGAATTGGGATACACTGCTATATTAGCCGCTATTGATGATCA
ACTTGTATGTACAATAGCTGTAGCAGATGAAGTAAAACCGGAAGCGCATTTAGCTATATA
TTGGCTGAAGAAAATGGGTCTAGAAGTTTGTTTGTTGACCGGAGATAACAGGAAGACTGC
TGTGGCGATAGCTAGACAGGTGGGAATTAGAAAAGTGTACGCAGAAGTGTTGCCATCTCA
CAAGGTGGCAAAAATACAGAAACTACAGGAAGAAGGACAGAAAGTTGCCATGGTGGGCGA
CGGTGTCAATGATTCGCCCGCACTTGCCCAAGCCGATGTGGGCATAGCTATAGCCAGCGG
GACCGATGTAGCCGTAGAGGCAGCCGATTTAGTACTTATGAGAAATGACCTATTAGACGT
TGTGGCATGTTTAAATTTATCTAGAACTACCGTCAAGAGAGTTCGATTAAACTTCTTATT
CGCCTCTGTATATAATTTACTTGGAATACCGTTAGCAAGCGGGGCGTTCGCTTTTTACGG
CCTACAGTTAAATCCGTGGATGGCGTCAGCCGCAATGGCGATGAGTTCCGTATCCGTTGT
GTGCTCAAGTTTACTGCTCAAAACGTTTAGAAAGCCTACAATAGAAGAATTGAGGACTCA
AGAATATTTACAATCTATAAAACTGGAAGATTTGGACTCTGTTTCGGTTCATCGAGGTTT
GGACGAAAGAATCGACCCAAGAGATAAAAGTGTTACTACACTATCCAAGTTTTTCAACAG
AGCTAAAACGAACGAGGGTTGTCTCCTACAAGAAGATGACGAACTAACTTCAGTGTCATT
TATACCGAAACGTATATCGCGCGACAACCCTAGCTTGAACGGCTGAAAAAGACTGACATA
ATCGTACAATGATATTACCATTCATTTTAATATACAGGGTGTTTATCCCAGCTGTAG
(4617 bp)

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