SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27169_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_copper-transporting_ATPase_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005524 F ATP binding
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0006882 P cellular zinc ion homeostasis
GO:0007595 P lactation
GO:0007623 P circadian rhythm
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0010043 P response to zinc ion
GO:0015677 P copper ion import
GO:0015680 P protein maturation by copper ion transfer
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0030001 P metal ion transport
GO:0032588 C trans-Golgi network membrane
GO:0035434 P copper ion transmembrane transport
GO:0043682 F P-type divalent copper transporter activity
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051208 P sequestering of calcium ion
GO:0051591 P response to cAMP
GO:0060003 P copper ion export
Transcript
Level		FPKM:3.82 TPM:3.22
ORF EntryO_TrvaMG16909_complete:A_TrvaMG_comp27169_c1_seq1
Sequence
(Nucleotide)
GTTTTATTTAAGTTTAAGCAAGTTTTAACACATTGTGGTCAAGTTAAATTTTTAATCGTC
ATAATAGCAGTGAGTTTACAAGTTTCGGTGCCCTAGATTTGGTATAACACTTAACCAAGT
GCTTAAACTATTCCTGATGATCAGAAATCCGTAGCCGCTAGCCGCCGTTATCGTTTAAAT
CCTCGAAGCTTTATATCGCCATGTCTGTGCACGAGGAAGCCACGGAAATGCTTGAAAGTC
CTAGAAAGAGGGACCACGATCAGGACCTGGTTGCAGTAAGGGTTCCCATCAATGGCATGA
CGTGCCAGTCCTGTGTTAGGAGCATAGAAGGTTCCGTGAGAGATATACCAGGAGTCGACC
ACGTCAAGGTGGAATTATTAGAACACGCCGGCTACATCAGATATGACCCTCGGCTGTGTT
CGCTGGAAGGGCTCAAAACTCACATAGAGGACATGGGCTTCGAAGTTCCGTCAGACCACG
ATGATGAGAGCAGAAATCTCCTTCCAAAAGAAGTGCCAACAGTTGATTTGTTAGATATGC
TTGGAAATCAAACTAGTGAAGTCTTCCTTTCCGTAATAGGAATGACATGTCAGTCCTGTG
TCAACACGATAGAAGGAGCATTAAGTACTAAGAACGGTGTCACAAACGGCAAGGTATCAT
TACCAGATAATACGGCCCGTGTTAATTATACTCCTAGTATTATATCGCCAAAAGAAATAG
CAGATCTGATATATGAATTGGGATTCGATGTCAGCATTATATCTGTAGATGGACAAGTGT
ATACAGAGAATAAGTCACAAATTTACAACGACAAAGAAGGTTCAGGCGATTGCGTCAAAT
CTTCACCGCTCAAAAACAAACTTCAAACTAATGGTTCAGGTCCACCAGTTGCTGAAACTG
AATTATCACGATGTACTTTAGAAGTAAGAGGAATGACTTGCGCCAGTTGCGTTTCTGCTA
TAGAAAAACACTGCTCGAAAATATACGGGGTACATTCAGTACTTATAGCTCTTTTAGCGG
CCAAAGCAGAGGTATGTTATGAACCTCTAAAAATATCAGCATTGGATATAGCCAATTCGA
TATCAGAATTAGGTTTTCCTTCTGAAGTTATAAGCGAAAATGATGGCAGTGGTTTTAAAG
AGATACATCTATTTATAAAAGGCATGACATGTGCATCATGTGTCAGTAAAATCGAGAAGA
CGGTACTTAAACTGACTGGAGTTGAATCGTGTGCTGTCGCTTTGACAACTAGCAAAGGTC
GCGTAAAATATAATTCAGAACAAATAGGGCCTAGGACGATATGTGAAGCTATAAATAGCC
TCGGCTTTGAGGCTTCGGTAGCCAGTCCTCATAATAGAGGGGAGACAAGCTATCTAGAGC
ATAGAGAGGAAATAAAAAAATGGCGTAACGCATTCCTAATTTCACTATTATTTGGGGGCC
CATGTATGGGTGCAATGGCGTATTTTATGAGCACAATGCCTCCAGGACACAGCGCTAAGG
ATATGTGCTGTGTGTTCCCAGGATTGAGCTTGGAGAATTTAATCATGTTTCTGCTGGCAA
CACCGGTTCAGTTTATCGGAGGCTGGCATTTTTACAAGCAGGCTTATAAAGCTCTTAGAC
ACGGAACTACAAATATGGACGTCCTTATTGCTATGACAACTACAATAAGCTACGTATACT
CCTTAGCAGTGGTGATAGCATCAATGGCTACTTTACAAGATGTATCACCTGTCACATTCT
TTGACACGCCACCAATGTTGTTAGTGTTCGTATCTTTGGGACGATGGCTCGAACATATAG
CTAAGGGTAAAACATCAGAAGATCTATCGAAATTATTATCATTGAAAGCAACTGAAGCAG
TTTTGGTAACTCTTGATGAGTCAGGTAATATCCTCAATGAGAAGTGTATTCCTGTTGACC
TGGTGGAAAGGGGTGATGTTTTAAAGGTTGTACCAGGAGCGAAAGTCCCAGTTGATGGTA
AAGTGGTATCGGGACAGACTATGTGCGATGAATCATTGATTACTGGTGAATCTATGCCCG
TACCTAAAACTAAAGATTCCCTAGTAATCGGGGGTAGCATAAACGCGAACGGGGCAGTGT
TGATGTTAGCCACGCACACAGGGGAGAGTTCTACATTAGCTCAGATAGTAAGATTGGTAG
AGAGCGCTCAAAGCAGTAAGGCGCCCGTACAGAGGTTGGCTGACACTATGGCTGGGTATT
TCGTGCCCCTAGTGGTATTTTTATCCGTACTGACGTTGGTCTGTTGGATCATAAGTGGTG
CTTTGGACATTGACAGAATAAAAGCTATAACTCCTGAAGTGTACCGACACGCTGGCTACT
CTAACTGGGAGCTCATCGTCCAATCAGCGTTTCATTTCGCCTTGTCAGTGCTTGCGATAG
CTTGTCCATGCGCGCTTGGACTCGCCACGCCAACGGCTGTGATGGTCGCCACGGGGGTTG
GCGCCAACATGGGACTCCTTATAAAGGGGGCTGAACCGTTGGAGAACGCTCATAAGGTAA
AAACAGTGATATTCGATAAAACGGGTACAATAACAAGAGGTTGTACGACAGTCGCTAAAT
TATGTTTGTTTACCGGAGATGTAACAACACTACCAGATATAATAGCGTGTCTACTCGCCG
CCGAACGCAATTCGGAACACCCTGTAGCTTCGGCAATAGTACAATGGTGCAGTGTAGTAC
TAAAAGGCGCTAATCATGTCAAATGCACCGGGTTCTTAGCCGCGGCCGGATGTGGTCTTA
GAGCTAAAGTGAAATTAACTCAACATACGGACAGACAGCTTGACAACTTGGTGAATAACG
AGACGCCCGGCAGTACGTTTGATCTTCACGGCGTTCCCGTAGAAATTGTAGCCGATTCTG
ATGATGTAGCTTTAAGCTCTGCCCAAGCCGCTATGAGGTTAAACAGATTGATCACTACTG
ATGGTGGGGATGAGAGCGAACACATAGTTTTAATAGGTAACAGAGAGTGGATGTCTCGTA
ACGGAATAAGTGTTCCCCGGCCGGTACAAAAAGCGTTGAACGATCACGAAGAATTGGGAT
ACACTGCTATATTAGCCGCTATTGATGATCAACTTGTATGTACAATAGCTGTAGCAGATG
AAGTAAAACCGGAAGCGCATTTAGCTATATATTGGCTGAAGAAAATGGGTCTAGAAGTTT
GTTTGTTGACCGGAGATAACAGGAAGACTGCTGTGGCGATAGCTAGACAGGTGGGAATTA
GAAAAGTGTACGCAGAAGTGTTGCCATCTCACAAGGTGGCAAAAATACAGAAACTACAGG
AAGAAGGACAGAAAGTTGCCATGGTGGGCGACGGTGTCAATGATTCGCCCGCACTTGCCC
AAGCCGATGTGGGCATAGCTATAGCCAGCGGGACCGATGTAGCCGTAGAGGCAGCCGATT
TAGTACTTATGAGAAATGACCTATTAGACGTTGTGGCATGTTTAAATTTATCTAGAACTA
CCGTCAAGAGAGTTCGATTAAACTTCTTATTCGCCTCTGTATATAATTTACTTGGAATAC
CGTTAGCAAGCGGGGCGTTCGCTTTTTACGGCCTACAGTTAAATCCGTGGATGGCGTCAG
CCGCAATGGCGATGAGTTCCGTATCCGTTGTGTGCTCAAGTTTACTGCTCAAAACGTTTA
GAAAGCCTACAATAGAAGAATTGAGGACTCAAGAATATTTACAATCTATAAAACTGGAAG
ATTTGGACTCTGTTTCGGTTCATCGAGGTTTGGACGAAAGAATCGACCCAAGAGATAAAA
GTGTTACTACACTATCCAAGTTTTTCAACAGAGCTAAAACGAACGAGGGTTGTCTCCTAC
AAGAAGATGACGAACTAACTTCAGTGTCATTTATACCGAAACGTATATCGCGCGACAACC
CTAGCTTGAACGGCTGAAAAAGACTGACATAATCGTACAATGATATTACCATTCATTTTA
ATATACAGGGTGTTTATCCCAGCTGTAG
(3988 bp)

- SilkBase 1999-2023 -