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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27168_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_receptor_corepressor_1_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0001102 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0002155 P regulation of thyroid hormone mediated signaling pathway
GO:0002361 P CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005876 C spindle microtubule
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007623 P circadian rhythm
GO:0014067 P negative regulation of phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0016580 C Sin3 complex
GO:0016922 F nuclear receptor binding
GO:0017053 C transcription repressor complex
GO:0019904 F protein domain specific binding
GO:0021794 P thalamus development
GO:0031065 P positive regulation of histone deacetylation
GO:0032922 P circadian regulation of gene expression
GO:0035033 F histone deacetylase regulator activity
GO:0035257 F nuclear receptor binding
GO:0040014 P regulation of multicellular organism growth
GO:0042632 P cholesterol homeostasis
GO:0042826 F histone deacetylase binding
GO:0042974 F retinoic acid receptor binding
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046329 P negative regulation of JNK cascade
GO:0046965 F retinoid X receptor binding
GO:0046966 F thyroid hormone receptor binding
GO:0051225 P spindle assembly
GO:0060318 P definitive erythrocyte differentiation
GO:0072362 P obsolete regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter
GO:0072368 P obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter
GO:1903799 P negative regulation of production of miRNAs involved in gene silencing by miRNA
GO:1904017 P cellular response to Thyroglobulin triiodothyronine
Transcript
Level		FPKM:2.84 TPM:2.39
ORF EntryO_TrvaMG16891_3prime_partial:A_TrvaMG_comp27168_c0_seq1
Sequence
(Nucleotide)
CGCCTCTCCGCTGCGAGCGCCATCGCGCGGCCGAAGCGCGAAGCACATACGTCGACTATA
CGGCGTTGCCATTCCGTATCTATAATTTTGCTGCACGTAAATTTCGAGCGAAACAGTTCA
ATGGACTTTTCGAAAACTACGAAAACGCGTCGTCAAACTTAAAAAGTTATGTGTAACCCA
GGGTATCTTAGGTGAAAGTGTATAACAAGTAGTTTTTGTTCAATTTGTGTTATTCTAGTG
CTAGTTTCGTGTCCGTGCTTGTTGCCCGTGAACAAAGTCCCGTTGGGAACTTCATCATCG
GTTTACTTCTAAAAGGTTGCCGGTGCAGTGCAGTGCGGTGTTGTGTGTGTCAGTGTGTGT
ATGTGTCGGTGCGAGAGAGCGCTCGAAATGGCGCGTAGATAGCGAGCCGCAACAGTGCAG
GCATGCGCGCCGCCTAGCCATGCCACCGGCCCAACGCCAATGGCGCAGTACTCACAAAGG
ACACAGCCAATGCACAGGCCCGGGCAGTCTGATCACGGGCACAGCGGCGGCGCGCTGTCG
TACGGCGGCAAACCGGCGGGGGCAGTGGTGGCGCCGCCTCGTCCGCCGCCCACTACGCCC
TACGCGCCGCAGCCTTACCCACCAGCTCAGCTGCGATTGCACCAGCCTGGCTATGGCTCA
GCGGCACTCTCATACAGGGATGGAAGCTACGGCCGCAGCGGTGGTGCGGTGGGCGAGTAC
CGAGGCGGGGGTCGCATGTCGTTGCTGGGCACCACGTACCTGCCTCCCCCCGCGCCGGCG
ACCCTGCACCCTCCCCCCGCAGACCCGCCACCCTTCAAGAAGATCCGCCTTACTGCTGAA
CGAGCGCCCATCACGCAGTTGACTCACCATCTGCCCCTCAGGGTCGACACTAGGGAGCCG
GTGAACTCGTACAACACGGTCGATGTACTACTGTCACCGAACCCGACCTCGGAACCTTCC
GGCGAGGACCAGACGCTCCGGACCACCAAAGATGTCCTTCTTAAGGAAATATCTAAGGTG
GACCGAGAGATGGCGCTGGTCGAGAACTCCCTCGCCAAGTTGAAACGTAAGCAAGAGGAG
CTACAACAGTCTGCGTCCAAACCGGCGCAGACCGAAGAGCCTGAGGAGGCACCTTCACGG
CATAGGAGTCTCGCGCAATGTATATACGCTGAAAATAGAAAAAAGGCGGCCTCAGCCCAC
GGTCAGCTGGACCACCTGGGCCCGCCCGTGCCCTACCCGCTCTACAACCAGCCTCAGGAC
ACGGAGGTCTACCACGAGAACATTAGGAAACACAGATTATTTAGGAAAAGATTGATCGTA
CATATACGGAGAATAAAGGCTGAGTCTGAAAAGAGAGAAGATTTATTAGCAGACGAGTAC
ACGAAACGAGCGGCGGAGTGGGCGAGAAGAGTTGAAAGAATAGAACAGAGTCAAAAGAGA
AAAGCGAAAGATGCCAAGAACAGGGAATTCTTTGAGAAGGTATTCCCGGAGCTTAGAAAA
CAGCGCGAAGAACGAGAAAGGTTCCACCGTCTCGGGGCGCGCGTCAAGTCCGAAGCTGAA
CTTGAAGAGTTGGCTGACGGCCTTCATGAACAAGAACACGAAGACAAGAAGATGCGGGCG
TTGACCGTGGTGCCGCCATTGAGGAGAGACCCGCTGGATACCACGCCTATATACCTAGAT
ACTAACACGTTGATTCCAGGAAGGTGTCTCGACATGAAGTCGGAGCACAAGGAGCTACAA
CTCCGGAACATCTGGTCGCAGGCCGAGAGGGAGATCTTTAGAGAGAAATATCTGCAGCAT
CCCAAGAACTTCGGGACGATAGCGTCGTTCTTACCTAGGAAAAACGTTAGAGACTGTGTT
AGATTCTACTACCTATCGAAGAAGTGCGAGAACTACAAGCAGCTCCTCCGCAAGCCCCGA
CAGCGCCGCTCGACGCGCAACCCGCAGCGCACCGCCGTCGAGACCGACCTGCCCGCCGGC
GTCACCACGCGGCTGCAGCGCTCGCAGGGAGCCCGTTGTGCGGACGTCAAGGAGCCCGTA
CTGGAGGAGACGGCGGGCGTGCTCATACCGGAGCCCTCCGCCGTGCCGCTGCCCGCCGGA
GCCGCGCCCCAGCAGACACACGGTTACGCGTCAATCAGGGTAGAACTAACACGAACACCT
CCTCTACCGCCGTCCCCTCCCCCGGCGTCTTCAGCCCCGCTGGCGGTGACCACCGCGTCG
ACGATACTGCTCACGATGGCCCCCATGGACAGTCCCTCGTCGATCCCTATACCGGCCTCG
TCGCCACCGCCGACCGCGACCGTTCTAGAGCTGCCGGCCACGACGACGGCGACTGTCACG
GAAACTACCGTCACCATCACCGCTTTAACTTCCGCACAAGACTCGCCGCTGCCCGCCGTA
GAGTCGCCAGTGCCCACACCTGCGCCCTGTGTGACACCCACAGTAGTGGCATCACCGGCC
CCCGCGCCCTCGCCCACTCCCGCCGTCTCGATACCGTCGCCCGCCTCGACCCCCGCGTCG
ACCAGCCCGTCCATTGCAGCGACGGTATCGACGTCGACGAGCACGCTGATCACCACATCG
CCGAGCGCGACCACGGTGCCGTCGCCTGCCTCCACTGTTGTAGTATCGGCGGTGGTGACG
TGTTCGCCGTCCTCGACCCCCACGTCGGTGGTGGTCCCGGCGGTGATCACGGTCGCGGGT
CTGCCCTCGGGTGGGGGTGCGAGCGGCCCGTCGAGCGCGCCCCCCACCCCGCAGCCGGCT
AACCCTCCCACGCCTACGCAGCCTCCTCCAACACCAGAAGCAGCGGTAATAGAAAGGATA
GGAACGCCATCGACTAGCGTAACACCTACCACTACCACGACAACCACAACAATGACTACC
ACGTCTTCAAACTGCGCGGTCTGTAGTGCACCAGGCGCTACCAGAACCGTTTCCAGATCA
AGAGCTGCACATTACGGACTTAAGGAGGAGTCAGTGGGTTCCCGCGTGTGTGAGGCGTGT
CACTGCCGCTGCGTGCGGTCCCGGTACACGCGGTGTCCGGTGCCCACGTGTCCGGGGCCG
CGTGTCCGCGCCAAACGACTGCGACACCTGCCGCCGCGGTGGCACGACCTCGCCATAGAA
CTGAAGCGACCGCTCATGGATGAATTCCAAATCCCCAGCGAGCTGAGCAAGTGTTGTCTA
TCATGTCTGAAGCGTATAACTCGTCGGCTGGAGAGCGCGGGCCCGGGCTGCGAGCCCAGC
GAGGACGAGTTCCGCGGCTGGCTCCGGGACCACGGCACCGCCTGGGACAAGATCGCGGCG
CTCAGCGGCAGGACACCGGCCACGCTTAAGGCTTACTACTTTACGTATAGAAAAAAGCTG
CAACTAGACTCGATAGTATCAGGCGGTAGTAGCACGACCAGCGCAACGGGTCGCTCGTCC
AGCGAGGAGAGCGGCTCCTCCGAGTCGGAGGGGGGAGTGGGGTCCCCGCCCCCCGCCGCG
CTGCCCCCCGCGCCCCGCACCGACGCCGCCGCCCCGCGACGAACCAGGAAGGACGAGTAC
GACTCCTCTGCTACTGAAACTGCGGACGAGGAGAACGACGCTCCTTCTGTTAAGGTGTTA
CCTTCAACATCAATGCCGACGCCGGTGTGTTCGACGCCCTCATCGACAACGTCCACCGCC
AGCCCGCTGACGCCGACCATCCCCTGCTCCGCCGTGTCCAGCACGCCCCCCACTTCCATC
GCCACCAGCGTGCTCACCTCCGTGCCGGGCGCCACGGTGCTGACCCCGGTGTCCGGCGCC
ACCGTGCTGACCCCGGTGTCCGGCGCGAGTGTACTGACTCCAGTGACTGGCGCGAGTGTG
CTGACGAGTGGCGCGAGTGTGTTGAGTGCGGCGAGCGGGCCCAGCGTGCTCAGTAATACG
GCGCAGGCGATCAGGTCGGCCGTCTCCACGCCGCAGACTGTTAGAGACGTTGTGTTGAAT
ATTATAGAGTTTAGTTTGAGTAGAGAAGCGCAGCCTCCGCCCATCAAAACGCATCATCTT
AAGACTCCTTCAACAACACCGAGCAGATCAAGCAACGACAGCTTAGCGACATTAACAGTA
GTGAACAGCAGCCACGCCGGCCACAGCCCGTCCCCTCGCTCGCCCCGACCCACCGCCACC
ATCACGCCGGTGGGGGCCGCCCCCGGGGGACAAGTAGGGAACCAAGGGGACAAGGATGGG
GTCGTCGTATTGATAGAACCTCGGCCTGATTCGTTGCTCGATCTCACCGTGAAAAGAACA
GACAGGAGACCGGAACATGCATTCCCTACTCCCAATAAATCAAACACCTACAGAAACTCA
GAATACGCTCAGTACGCTCGCGAGCGCGAATCTCCGAACCAATACAACACGAAGAAGGCC
GTCGCGAACTCCAGCGTGCGCGTCCTCAAGAACGTGACCAACCCCAAGGGCTCCATCACT
CTGGGCACGCCCGTCGAGAGCCGCTACGAGCCCAAGTCGGGGTCCATAACCGCCGGCACG
CCCGTACACCCGCACCTGCACGACAAGAAGTTCGACCAGTACTACAAGCGGCGCAGTCCC
GGCGGACCCGCTTACTACGCCACGCAGCCTCGCCCGCAGTCACCCTCCTTCTCACAGTCC
GGCAGCAGTTACGGTCGCAACCCGCACGTCCTAGAGCAGCGTTCGATCATAATGGCGGAC
TTCATCACGTCGCAGCAGATGCACGCCGGCGCGAGACGCGAGCGCGCCGACACGGACTAC
CCGCCGGCACATCCGCAGGCGCAGCACCAATCGCAGATCCCGGCGGTGTTGCCGACGTCG
CACCCGGCGGCGCACCCGGCGCAGCACTCCGCCGGGCACCCCGCGCAGCACTACTCGCGC
CGGGAGCCCGTGTCTGTTATACAGCGCCACACGGCGGGACACGGACTCTATCCGCACCAT
CCGCCGCCAGGTCACGAAGCATTTACATCGTTAGTGAACGTGGCATCAGCTGCGACGGCG
CTGCCCGTGCCCGGAGGAGAACCCAAACCCGACGCCAAGACACAACAGCACCACTCCACG
CATGATGTCAGATTACGAGATTTAGGGATGTCTCAGAAATACCACAGTATACCTCAATAT
CAGGTGATCGATAGAAGAACGAAACAACAACAATACAATATGGAAAGAGACATTCAGATC
GCTATGCAACAGAGAAGAGAGAGTGATCGACCGTTGGAGAGGCACGAATCTCATTCAGCG
CATCCACAACTGATTCACGAAAGACATCTACTGCCGCATGTACAGAACGTATCGTCTCAA
GAGAGTAGACTAGTAACATCTGGCACGTACAGCACCGCCAAGCATCGCTCGCAGACGCCG
CACTATCTCGACGCAAGGCTCACCAAGTCTGAAATTCGCGCGGCGGTATCGTCAGCCCTG
GCGAGCGGCGCGGCGGCGGGCGTGGCGAGCGCGGCGGGCGTGGCGGGCGCGGCACAGGAC
CGCTCGGGCAAGCTCACCGCCGCCTCGCTTATCGACGCCATCATCACGCACCAGATCAAC
CAGACTTCCGATCAACGATTCCCGCAACAAGGTGTACGTGAGTGCGACAACGGTGGCGTA
GTGGGCGTGGCGGGTGTGGGCGTGGCTGGTGTGGCCGGGCTGGAGCGCGGGCACGGCGGT
GCGGGGGCGGGGGTGGAGGACTTGGCGCACAAGACCAGCTTCAAGCTAGGAGACCTCGCC
TCCAACATTATCACGCGGGACTACCTCGCGCCCTCCGCCGCCCTGCTACAACAACACAAC
AGTCGATTTCCTTCGGTGTCGAGTTCAGAGTCGTACAACCCGAGTGTGAGCTCGCACCTG
AGCGTGTCCAGCTCCATGGACGAGTGGAAGCGGCGCGACGCCTCCAACCGCGTGCCTTAC
CTCGAGCCCGTCTCGCCGCCGGACAACCACCACTCCAACCATCATGTTAACAGGAGTAGT
AGCAATACAAGCAGTAGCGTGGTGAGCAGCGTGGCCGGTGGCGGCGGCGGTGGGGGCGGT
AGTGGCGGCGGCAGCAGTAGCGGCGGCGCGGCG
(6033 bp)

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