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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27161_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		hypothetical_protein_KGM_11844_[Danaus_plexippus]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.96 TPM:3.34
ORF EntryO_TrvaMG16771_complete:A_TrvaMG_comp27161_c0_seq5
Sequence
(Nucleotide)
AGATCCACCCTGTATAATAATTATAGTTTGTCATTTAAAATCTTACCAATGGATTAGGCC
GGAATCTATAAGCGAGCATCATGCGTTTTCTGTACGCATCGAACTCATCGTCATCCGGAG
ATACCACATCCGAAGTTGATGCTCCGAGACCCAAATTTTGTACCGGCTGATTACCTTTGT
TAATAGGTTCAACTATTCCAGCACCTTCTAAACCTAGACCTTGACCTTCATTCCATCCAA
GTTTCTGAAGCATTTTGAAACCCACATTGTCCTCTTTCAGTTTGAATTCTTTGTAATCGC
TCAAGTCTGGCTCCTTGCCACTTTTCAATGCTGAATACTTTTCCATGAACTTTTTCAGTT
CCTCTGGAGGTAGAAAGTCTCCTATGTGATGTTTCCCAGCTGCCTGTTTGGTTAATTCGT
CGGCCCATTTCTCAGTAGCAAACATTTCTTTTGCACGTAACTTGTGTTCCCAAGTACCAT
CAGTAGTGTCCTCGTCGCTGTCATATTCGTATTTATGTTTCCCGGCCGCCGCCAGACGCT
CTGCGTCCTGACGTTTCTTTAACATGTCTTGGTATAACAAATTGAGCTTGAAATTATCTT
CACATTGTTTCCATTCATCGGGGTTTAAGTTTGTACTTCCATAATTAGTCATGGCGTACT
GCATAAGAGCTTGATTATTACGATTCACAGTTGATAGCTTCATACCTTCTTCGTCGATTT
TAGCTAGTTTTGGACCTGGTAATCCTGGCATGGTAGGTGGTAATGGTAATGATGCGATGA
CACCGGGCGGTTTAATGTCAGCGGCGGGCGGGTCGTCGCTCCAACGAGATTTCTTCTTCC
TTCTACGTTCCTTCTTAATATCGGGTTCCTCGTCGCTTTGAGAGCTCGCTTCACGTTTGT
AGTCGCGATGTTTGTAATCTGCTGTGCTATCCTGACTTTCCTCTTTAAAACGTCGATTAT
CACCACTGTCATCATCCTCCAAGCTGAATTCCGGTTCATATTTATCTTCTGGTTTAATAA
CAGGCTTTTTGTCTAAGCCTTTCCTTAGATTATCGACTAAATCCCGAAACATCTGGTACT
CCTTCGATTCTGTGTTATGGAGAAACCACAAGAATTGGTCTTGTGAGTGTATGGCTTTCA
GCACATTTTCCCAGTGGTCGCCGTTGCTGGCAACTTCGGAGGCGGCTCGGTACACGGACG
GCGGCAACCCATCTGGAGAGAAAACTTGATTCGCATTTGGTGGCAGCGGAGGCATTTCGC
TGAGTTTAGGTTCATTGCTCTGTCTGCTTTGAGGAAGTGGAGGCGGCAAGGGAGGTGGTG
GAAGAATCTTAGTATCGTTAGAATTAGACTCCATGGAATTAGGAGGCATAAATGGCATAG
GTGGTGGTCCAGGGGGCCCATTACCGTTGTCAAAGTTGGGAGGACCATTTGGCCCGAAAG
GAGGACGGGGCCCTCTAAAAGGCATATTGTTCATAGAGTTTGGAGGCATAGGGCCATTAG
GACCCATCATAGGGTTGGGGAACGGTGGGCCGAAAAAGGGTGGCATTGGACCGTTTGGTC
CAGGACCTGGTCCCATGGGTCCATTGGGTCCACACATATTAGGCGGCATTGGTCCACAAG
GGCCTCTAGGACCGTTAGGGCCCATAAAGTTAGGAGGCATTCGGAAGTTAGGTGGTCCTC
CCATGAAAGGGGGCATTGGACCACCAGGGGGCATCATAGGTCCACCTGGCCCCATAGGCC
CAGGTCCCATTGGTCCCATCATTGACCCGGGGCCCATATCTGGTCCTCCCATATTTGGTC
CCATGTTAGGTCCAGGTCCCATATTAGGTCCAGGTCCCATGTTTGGGCCTGGTCCCATGT
TTGGTCCAGGTCCCATATTCGGTCCTGGACCCATGTTTGGCCCTGGACCCATATTTGGCC
CCATCATGTTTGGTCCCATAAAGCCTGGAGGAGGCATCGGGCATGGCCCTGGAAACATGT
TGCCTTGTTCTGAATTTGAATCGGAGTCCCCATCATGTTGGGGCTTCCAATTGTCTTGGT
CGTCAATATCATTGGGTTGCCAGACAGGAAATTGCATGAGAGATGGTATGGAATTATTTT
TATTGTCAATGGACTTTCTTCTGGATAACACAGGGGTAGTGGGACTGTGAGCGCGATTAC
GGCCTCTGTCACTCCAACGGCGATGCTTATCTCGGTCCCTTCCTCTGTCCCCAGAATGTT
TTCTTTCTCTGTTAGAGTTATCATCATTATGTTTGTCACGTCTTCTCCCTTCTGATTTGG
CCTTTTCTTTTGCCTTCTCTTTCTCAAGTTTCTCTTTTTCTTTCTCATCTTTTTCCTTTT
TCTCTTGATTCTGTTTTTCAATGAGAGCTTTGTACTGACTCATGAAACTTCCATCATTTG
AGAATATGTTTGCGCTGTTTGAATCCTCTTGTTGTGTAGGATTAGTTAACTTCGCTTGCG
CGGCTAATGCAGCAGCCTGCCTCTGGGCTTCGACCTTTGCCTGAATCTCCATCTTTTTCC
TCTCTATTATTTGCTCCTGTTTCGTCATTTGAGCCCATCTTGTACTCAACGACGATTTAT
TTTTTTGATCTTTGGTTTGAGAAGTAATATTCATGGTTGTTTTATCGACAACCACGTATT
TAACGAATAACGCTAGGTTTTAAAATATTGTCAAGTTTAATTTATTCCCAAAATGAACAA
GTATACAAAAAAAATCTGAG
(2720 bp)

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