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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27157_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cytoplasmic_dynein_1_intermediate_chain_isoform_X4_[Bombyx_mori]
Ontology
GO:0000226 P microtubule cytoskeleton organization
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005868 C cytoplasmic dynein complex
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0006810 P transport
GO:0007018 P microtubule-based movement
GO:0007051 P spindle organization
GO:0007291 P sperm individualization
GO:0007349 P cellularization
GO:0008088 P axo-dendritic transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016482 P cytosolic transport
GO:0030286 C dynein complex
GO:0031965 C nuclear membrane
GO:0034501 P protein localization to kinetochore
GO:0043005 C neuron projection
GO:0045503 F dynein light chain binding
GO:0045504 F dynein heavy chain binding
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
Transcript
Level		FPKM:11.39 TPM:9.59
ORF EntryO_TrvaMG16726_complete:A_TrvaMG_comp27157_c0_seq3
Sequence
(Nucleotide)
GTCTCCAATTTCTTTGATTTCTTTTTATTATTGATTTATGCTTTTAATGCAGTACTTTGA
ACTAAAAGCGAATCATTATTAAAAATATACTATTAGTGCGTTTACTTACTACCTAAAGTT
TCGTTGTTCATAGTGTTTTTGGACTTTAAAATTCCATTCGAAAATCCAATAAGGGAATAC
GTCCCGTTACTCATCCTCGCCGTAAAAACTCTGCCACGTTCTGTCGGCATTTTGAGTCCG
ATCAGAACGAATATGCCATATTAAAGTTTTCCACCAGCGTTAAATAAAAGAACTCAAGAC
GTCGAGCATGTCGGATCGTAAGGCGGAGTTGGAGAGGAAAAAGGCGAAGCTTCGAGCTAT
AAGAGAAGATAAAGATCGGAGAAGAAGAGAGAAAGAACAGAAAGATGCGGAAGAAGCATT
GCAAAGAGCCTCAGCCACGTCCAGCCTGGACAGCCGTCGCGACATCGACGAGATGCTGTC
CTCGCTCGGCGTGGCTCCCGTCAAGGACGTGCTGTCGTCCTTGTCTTCGATGACGTCACT
GACACCGCCGCAGACCGCCTCGCCGGACGCGAGCCTCCCGCACACGGACAAAACGAGCCT
GCAGACGCAAGGCGGTCCAAAAGCGAAGCAAAGTCGTGAAATGCAAGTGGTATTCGTGCA
ATCCACCGATATCCCGCCTAAAGAAACCGTCATTTATACTAAACAAACGCAAACCACGAC
TTCAGGGGTCGCAGAGCTACGTGATGCGCACGCAACCGATTACTACGACGAGTACAATCT
AAACCCGGGTTTAGAGTGGGAGGACGAGTTCACAGGTGATGAGGAAGACGCCGCCTTCCA
TGGTAAACTGCCGCCCGGGATCCTGCCCCACGGCCTGCCTACCGTCAAGGAGGTGCAGCC
GGCAGTTACTGACGCACCCGTCGAAAAGAAGGACGAGGAGAAGGAGAAGAAAGCGGTGCG
AGAGCTCAGCGCGGACGAGAAACAGACTATAATGCTGTCAGCGGAGTTCCAGCGGTTCAT
GAGCCGAGCGGGGCGCGTCATCGAGCGAGCGCTCGCCGAGTCCGTGGACATCTACACAGA
TTACACTGGCGGCGGCGACGGAGAGAACGCACTCGACGACAAATCCGCGGCACGTTTATC
CCTCGTCCGTACATTCGAAGAGGAGCGCTGGTCACGGGGCCGCTGCGTCACCTGCCTCGA
CTGGTCCTCCGTCCACCCCGAGCTGGTGCTGGCCTCGTACCACAACAGTGATGACGCCCC
GCACGACCCGGACGGGGTGTGTCTGGTGTGGAACACGAAGTTCAAGAAAACCACGCCTGA
AGATATCTTCCATTGTCAGTCGGCTGTCATGAGCGCTACGTTTGCAAGGTTCCACCCTAA
CCTGATTCTTGGGGGCACGTATTCCGGTCAGATCGTGTTGTGGGACAACCGCGTACAGAA
ACGGACTCCCGTACAACGAACACCGCTGTCTTCTGTCGCACATACTCACCCCGTCTACTG
CCTCTCAGTGATCGGCAGCCAGAACGCGCACAACCTCATCTCAGTCTCAACGGACGGTCG
CCTCTGTTCCTGGTCCCTCGACATGTTGTCACAACCACAGGAGACACTGGAACTCCAACA
CCGACAAGCGAAGCCCATCGCCGTGACCTGCATGGACTGTCCTCAGACGATGCTGAACAA
CTTCGTGCTGGGTTCGGAGGACGGCAACGTGTACAGCGGCTGCCTGTACGGACAGCGCGC
CGGCGTCACGGAGTGCGTGGAGGCGCACGCCGGGCCGCTGACCGGCGTGTCGTGCCACGC
CGCCGCCGGGCCCGTCGACATGGCGCATCTGTACCTCACGTGCTCCGTGGACTGGAGCGT
GAAGCTGTGGTCGCTCAAGGAAAACAAGCCCCTCTACTCGTTCGAGGACAACGGCGACTA
CCTGGTGGACGTGCGCTGGTCTCCCGCCCACCCCGCACTCTTCGCAGCAGCAGACGCCGC
CTCCAGACTCGACCTGTGGAACCTCAACAGGGACACCGAGGTTCCAATAGCGAGCGTGCA
AGCAGAAGGCGGGGCCGCATTCAGTCGTGTGTCGTGGGCTCCTAGTGGGTCACTTATCAC
CGCAGGAGACGACTGCGGGAAGATATCCGTGTATGAACTGGCAGAGCAAGTATGGTCGCC
CCGTCACGACGAATGGAATAAGCTGGTGTACACACTACAGGAACTCAGGAACAACCAGGC
TGATGACGACGCGGCCTTATCTCCTCCTCCCTCACTCTCCTCTATAGCCTCTATAGCTTC
TAACCCTCTCAGATAAACAGACATTAACTTGAAAAAAGCAGCTTAGAAGGAAAATTTTCT
TCAGCCATTCGTCTAGTATCATACGTTACTAGATGGCGCAATTGTGGCCGAATTTAGTTC
ACTATTTGTAAATGTTTTTTAATGAAAATAAAGACGACATTATGTAACCATTGTATTATA
TAGACTGCAGTAAAAAGTAAAAAAACTTTGGATGAAATAAACTGAAATTGGTTAAAATAT
CAACTCAGCATTGTCAGTCAATCTATCATTCTTTGTTTGGATGTTGTATATTAGTGCACT
CACTATAATATGAGAAAACTATTGGAACAAAGGTATGCTTTCTAAAAACTTTTGTAAAAG
TCATTGTTACAAAAAAGACTGGCTCTAAGATTAAGTAACCAATGACCGTTAAATTTGATA
TCAAAAATATAAGGTGCTGATTTTTGTAACGACGCAATGCACACAGCTAACATGTAATAC
AAAACAATAACTTAGTTTAAATACAAGGTTGTAATTGATCACAAAAAATAGCATAACACT
GGCTAATATTATTATCAACAAAATGCAGCTTTTTTAAACTCACAGAATGTAAATATTGTG
TTGTTACTAAATTATATTTCAAAAAAGTTTTTATTCAGATTCATCATTCTCTTTTTCATA
AATTCTTAAAAAATAGTGTACAGGTTTACATTGTGCACTGTAATAGTGTGTGTGGACCTT
TAAAATATCAAAACCTAATGTAACCTATTAATTGTATATTTCTACTTTTATTATATGAAA
TTTAGTTTTGATTATTTATAAATTATTTAACAGCACATTAATTCCATTATCGTTTATAGT
ATAGGTTATATTTTAGTTCTCGTTTCTTAGTATTTAAGTCAAATATATTAGTATTACTAT
ATGAATACTAGTACTT
(3196 bp)

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