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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27153_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine_synthase_A,_mitochondrial-like_isoform_X2_[Papilio_xuthus]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0004730 F pseudouridylate synthase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
GO:0070902 P mitochondrial tRNA pseudouridine synthesis
Transcript
Level		FPKM:2.15 TPM:1.81
ORF EntryO_TrvaMG16713_complete:A_TrvaMG_comp27153_c0_seq4
Sequence
(Nucleotide)
GTATTTTGAACTTTATTTAAATCTAGTCTCATGAACTTTGTAAACTACGTTTCTTGCAGC
GGTCACGGTAGTGAAACAAATATTGTGATTTACTCTGAACTGTGTAGATAAAAGCTTTAT
AGGTATGTCAGTATCATTACTCAGATTATTTGTTAGCAATTTGAAAAACAGTTTACCGAG
ACGTCCCGTAAGATCAGTATCGTCAAACGTACGCGGATTTTCCACCATGGAGGTCGCTAC
AGAGATCAAAGAAGATGAAAAATTACCAATAGTTCCTGATAAAGTCCTAACAAGATATAA
CAAACGTCGTATGAACAGACAATGGGAAGAGAAAGCGGAAGGTGAAAATGACGCTAAGAA
ACCATACGAAAGAATTAAAAGAAAAAAAATGGCCATGCTGTTGGGATACTCTGGAGTTGA
CTATTATGTAATCCTGGAGTAAGAACAATAGAAGAAGAATTACTAAAAGCATTATTAGAT
GCCAAATACATAACGCAAGAGGATTTTGATAATGCGCAAAATGCACAGTTTCAACGGAGC
TCGAGAACCGATAAGGGTGTGTCAGCGGCCCAGCAAGTTGTCTCACTTAAATTACCTCTC
GAAGTAAATGTAGAAGAAATAAACAAAAGACTTCCAGAAACTATCAAAGTATTTGGAGTA
AAAAGAGTGACAAACAGATTCAATTGTAAATCGAAATGCAACGCTCGATCATATAGCTAT
ACTCTTCCCACATACACGCTGGAACCTAGTTTAGTGACCGTGGAAGAGAGAAGGAAATAT
AGGATTCCGGCTGATAAAATAGAAAAGTTGAATAGTATACTTGAAGTTTACAAAGGTACT
AGGAGTTATCATAATTTTACGGAGAAAAAACACCATCAAGACCCATCATCTTCAAGGTAC
ATGATGAGTTTTACTGTGGAAAGAGTTTTTGTTCACTCTGATATGGAATTTGCAGTTTTA
ATTGTTAAGGGTCAAAGTTTCATGCTGCATCAGATAAGGAAAATGGTTGGGTTAGCGATA
GCAGTGATGAGGGGTTACGTTGACTCCTCGATCATGGAGAAGGCTTTCGGTAAAGACAAG
GTCATGATACCGACAGCCCCTGGATTAGGCCTGGTTTTGGACAAAGTCCATTACGATAGA
TACGACGCGCGTCATAAAACAACCCACGACAGTCTTACTTGGGACAAGGAAGAAGAAAGC
ATACAAAAGTTCAAAGACGAACACATTTATCCTAACATTGTGAAAGGGGAAATAGAAAGG
GATTCCATGGGTCTGTGGTTAGAGAAACTTGTTAGGCATTCCTATGAACCGACTGAAGAA
CAACTTCAAGCTGAAAAAACTGCAGAAAATGATGATGATGACGATGATGACACTGATGAT
AAAGTTCCTGAAAAATGTAGTGATGAAGCTGTACCTGAAAAACTGAGTGATGATACTGTT
GAAAAGCAAAGTGATGAAACTGTCGGAAAACAGTGATGAAACTGTTGAAAAACCTAGTGA
TAAAATTGGTGAAAAAAGTGATGTTTCATTGGATAGTGTGAAAAATACGTCATAGTTGTT
TAAGAAATTATTTCAGATTTGTTTTAATAGATATATTGAATTGTTGTATAAAATATTCGA
TGGGAATATGACAAGATTAATACTATTATAATTAAAAAAAAAA
(1663 bp)

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