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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27144_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		putative_RNA-binding_protein_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0032403 F protein-containing complex binding
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:6.29 TPM:5.29
ORF EntryO_TrvaMG16632_3prime_partial:A_TrvaMG_comp27144_c1_seq4
Sequence
(Nucleotide)
GTCTTATTCTCGTGTCTTTTTGTAGTGTTGAAAAACTGAATGTTTTCACAATTTCCAAGT
GAAGTGCAATTAATCAATTCTAAATTTCAATATTCAGCCACAGTGTTACTTAAGTGAGAA
TATAAAAGTGTAGCAGCAGGCCACGATGTCCTGGCGTAGTCGCGAGGAGCGCGGCTCGAG
GTGGGAAGCGAACAAGTGGGATTCGCGGGAGCGCTCGCCCGTCTGGGAGGTGCGTCACGT
CAGCCCGGAGCGCAGGTCGCCGCCTCGCCACCGACACGCGCACGAGCGCAGGGACCACCG
CCGCGACCGACGAGACCGACATGAACGCGATAGAGATCGCGATCGTCAACGGGAACGCGA
TCGTGACCGCAAACGACATGAGGACTCTTCCCCCCCACCACCGCCTCCCCCGCCGCCCAT
CATCACGGACGACAGGAGCCCGCGTCGCAGCCGCTCTAAAAGCCGAGAGAAAGTCACTGA
CATGGAGATAGAGAAGGAACACCATGAGGAGCACAGGCCACATGAGGACTACGGGAGATC
TTCTCCTGGTGACTGGATATGCCGCTGTGGCCTGTACAATTTCAAAAGACGACAGGTCTG
CTACCGTCGCACCTGTAATGGCACGAGAGCTGAAGGTGTACTATACTTGGATGGTGAACG
TGGATCTGAGGGCATCACCAAAAAATTACTGTTCCGTAGACTTGATGCTTTGACTACTGA
AGAGAAAATTCTGGAGGAGCTCAAAAAACGGTGCTCTAAAGAGATTCTTGATTCTATTGT
GGGCATCTCAATTGGTCGAGAGAGTTTGACGGGAGCATCGAAGTGTCTTGCCTACATCAG
CTTCAACTCCATAGCTGACTCAACAGCAGCACATACTGAGTTAGTCAGTTTACAACCACC
ATTGCATATAGATGGTCGAGAAGTTCTCATTTCTTATTGCAATGACAAAAAAATGGTTAA
GTACCAAGACTATACACCTTATTACCCGCCGCAAGTAGTTGTATATAATAATCCGACAAC
GCAGGCAATGTCAGAGGCAGATAGAGTGAATGCTGCAGCCGCAGTTGCCCAGTCTGCTAT
ATCTGCGGCTCAAGCCAGGCAGCTATCATGGACTCCAGTCACCAGTTCTCACACCTCTCA
ATCTAGCACAACCAATATTCCCACAGGAGACGGTAAAACAGTATACCCCGCTCCAGACGT
AAGAACATTCCTATATGATGAATCTTCAGGGTTCTATTACGATCCATCCACTTGTTTGTA
TTACGATGGGAAGACACAGTATTTCTACAACAGTCAGATCAGTCAGTACTTGTATTGGGA
TGGCAAGACTAGTACGTATCATGCTGTTTCTCAAGCTCAGAATGCAGAACAGCATAAACA
GAAGGAAGGAAAAGAGCCTGATGGCAAAAAACGAGGTGAAAAAGAAGACAAAGTCAAAGT
TGCTAAGAAAATAGCTAAGGATATGGAACGGTGGGCGAAAACATTGAATCAAAAGAAAGA
GAATGCTCGGAGTAATATTGTAATGGAACAACCAACAGATAATACTGCGAGTAAAGGCTC
AGCTGACATTGGCTTCTCAGTCCTAGGCGCTGGCCCAGCATTGACCCATGTCAGAGAAAT
ATCACCACCACCTACCACTGATGAATTCCTCATCAAAAAGATCACAGAACCAGTGGTAGA
GAATGATGATG
(1691 bp)

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