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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27144_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_RNA-binding_protein_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0032403 F protein-containing complex binding
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.18 TPM:1.00
ORF EntryO_TrvaMG16626_3prime_partial:A_TrvaMG_comp27144_c1_seq1
Sequence
(Nucleotide)
GTCTTATTCTCGTGTCTTTTTGTAGTGTTGAAAAACTGAATGTTTTCACAATTTCCAAGT
GAAGTGCAATTAATCAATTCTAAATTTCAATATTCAGCCACAGTGTTACTTAAGTGAGAA
TATAAAAGTGTAGCAGCAGGTAAACATGAATGAGTAAAGGCCGTTGAGAAAAAGCATTGC
GCAGTCATGGTGGACGGGATAGTATCGTGAGTATGAGTATCTGATAGTGCGCGGTGTTGC
AGGCCACGATGTCCTGGCGTAGTCGCGAGGAGCGCGGCTCGAGGTGGGAAGCGAACAAGT
GGGATTCGCGGGAGCGCTCGCCCGTCTGGGAGGTGCGTCACGTCAGCCCGGAGCGCAGGT
CGCCGCCTCGCCACCGACACGCGCACGAGCGCAGGGACCACCGCCGCGACCGACGAGACC
GACATGAACGCGATAGAGATCGCGATCGTCAACGGGAACGCGATCGTGACCGCAAACGAC
ATGAGGACTCTTCCCCCCCACCACCGCCTCCCCCGCCGCCCATCATCACGGACGACAGGA
GCCCGCGTCGCAGCCGCTCTAAAAGCCGAGAGAAAGTCACTGACATGGAGATAGAGAAGG
AACACCATGAGGAGCACAGGCCACATGAGGACTACGGGAGATCTTCTCCTGGTGACTGGA
TATGCCGCTGTGGCCTGTACAATTTCAAAAGACGACAGGTCTGCTACCGTCGCACCTGTA
ATGGCACGAGAGCTGAAGGTGTACTATACTTGGATGGTGAACGTGGATCTGAGGGCATCA
CCAAAAAATTACTGTTCCGTAGACTTGATGCTTTGACTACTGAAGAGAAAATTCTGGAGG
AGCTCAAAAAACGGTGCTCTAAAGAGATTCTTGATTCTATTGTGGGCATCTCAATTGGTC
GAGAGAGTTTGACGGGAGCATCGAAGTGTCTTGCCTACATCAGCTTCAACTCCATAGCTG
ACTCAACAGCAGCACATACTGAGTTAGTCAGTTTACAACCACCATTGCATATAGATGGTC
GAGAAGTTCTCATTTCTTATTGCAATGACAAAAAAATGGTTAAGTACCAAGACTATACAC
CTTATTACCCGCCGCAAGTAGTTGTATATAATAATCCGACAACGCAGGCAATGTCAGAGG
CAGATAGAGTGAATGCTGCAGCCGCAGTTGCCCAGTCTGCTATATCTGCGGCTCAAGCCA
GGCAGCTATCATGGACTCCAGTCACCAGTTCTCACACCTCTCAATCTAGCACAACCAATA
TTCCCACAGGAGACGGTAAAACAGTATACCCCGCTCCAGACGTAAGAACATTCCTATATG
ATGAATCTTCAGGGTTCTATTACGATCCATCCACTTGTTTGTATTACGATGGGAAGACAC
AGTATTTCTACAACAGTCAGATCAGTCAGTACTTGTATTGGGATGGCAAGACTAGTACGT
ATCATGCTGTTTCTCAAGCTCAGAATGCAGAACAGCATAAACAGAAGGAAGGAAAAGAGC
CTGATGGCAAAAAACGAGGTGAAAAAGAAGACAAAGTCAAAGTTGCTAAGAAAATAGCTA
AGGATATGGAACGGTGGGCGAAAACATTGAATCAAAAGAAAGAGAATGCTCGGAGTAATA
TTGTAATGGAACAACCAACAGATAATACTGCGAGTAAAGGCTCAGCTGACATTGGCTTCT
CAGTCCTAGGCGCTGGCCCAGCATTGACCCATGTCAGAGAAATATCACCACCACCTACCA
CTGATGAATTCCTCATCAAAAAGATCACAGAACCAGTGGTAGAGAATGATGATG
(1794 bp)

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