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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27142_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		non-LTR_retrotransposon_R1Bmks_ORF2_protein_[Bombyx_mori]
Ontology
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.19 TPM:0.16
ORF EntryO_TrvaMG16611_complete:A_TrvaMG_comp27142_c0_seq3
Sequence
(Nucleotide)
CAGTGACAGTTTGCGTGTCAGTGACGTTTTGTTTTGTGATAGTGACAGCTGACAATTGGT
GACTAACACACACGATTTAGTCTGCGAGTGAGTCGTATACACGATTCACTTGCAAATAAT
TCTTCATTATCATTGTTTTGTTGGCGTCCCTATACGCGAACTACAACTAACACTCGCATA
GGATGTCAGACACGGACGAGGGTGGGGGTGACCCCACCCAAAGACTGCTTGAGCGGGCAA
TGGAAGAGAAGGAGGAGGAGCTCCGGGTGATGGGCGAGCTTGCGAGGGAGAGGGGATTCG
CCCCCCGGTCCTCCCTGGCCCGCACCCCTCCACATGGACCAGCAAGCCATCAAGAAAAGT
TCGGCACACCTTCGGAGCAGCTACGACCAGGAACGGTGGAAGGGGCGCCACATCCCTCGG
CCAAACGCCCACTTTCATCCCCTGAGGAAGTTCAGGAGGCGGTACGTCGCAAGATGCAAT
CCAGTCGCCGGCCGGTCCCGCCTCTAAGCGGAATCCTGGGTGCGGCCCCGGCCCCCCCCG
TTCGGGGGACTGAGAAATCGACGGTTGTTTCTTCGGAGGTGGAGACTGGCCCAGCTGAGC
CAGGTTCCACTGACCTGCCGGCTGACTGTCTTAGCGGGAGAACTAACGAGGAATTACTCG
ACAAAGTTTATGGCGCTGTGAGGGGTATTGGTGTTGTGGCCAACGCGTCGAATAAACTAA
ACATTGCCGACAAGTGCACCATCGCAAGCTACGGTCAGGACATACTGGCAACCACTGCCA
GTCTGCAGCTTAGACTGGCCGAGGTCACGCACCGCGAATCGGCTCTAAGGATGAAGGTGC
AAATCCTCGAGCTCCAGCTCCAGACAATGGAGGCGACCCCGGCTGCCCCCTCCGCCCCGT
GCCGGCCAACGTCGGCCAGTCAATCGACCGACTTCCCACCCCTGGGTTCATCGTATGCGG
CCCGATTGAAGCTCCCAAAGGGCAAGCAGCCGGTAGATCTTGCGCCGCGTGGACCGGCCC
TGATCTTTTACCCGGCCTCGGATACTATCACGTCATCCGACGCGACCAAGACAGAGCTCA
AAAAGCACATCCAACCAGGAGCGGAGGGAATCAAAATTCAGAGCGTCCGCAGGGTCGGCA
ACGCGGGCGTGGTGGTCCGGACTGTGTCCGAGGCGGCGGCAGAGAAGCTGCGCCGCGCTG
CCCCTGCCACACTCAAGGTGTCGGACCCAAAGACCAGGAACCCACTGGTCGCAATTAAGC
GCCTTCGTGGCGACCCGTCCCCGTCGGAGGTGCTGGAGGACCTCCAGCGGATAAATCTCT
CCGAAGACCCAGACTGGCCTGCTTCGCGAACTGCCAAAGAAATTAAATTCGCCTTTAAAA
AAGGATTAAAAGGTGGCCCACGGACAACGGTAGTGCTCGAGTGTTCGCCTGCTGCCCGCG
ACAAGCTGATCTCCCTGGGCCGGGTGTTCATCGGTTGGGACGAGGCTGATGTGTTTGACT
ACGTCAGAGTGACTTGCTGCACGAAGTGTCAACAATACGGACACCCGGCCAAGTTCTGCC
GTTCGGCCAACAATGTCTGCGCCAGGTGTGGCGAGGAGGGGCACACAGGCGAGGAGTGCA
CAGCGGAGTCGCCTTGCTGTGCGACCTGTAAACGCTTCCGCCACAAAGATGCGGCATCAC
ACCGCACCACAGACGCCATTTGCCCTGCCAGGATTAACGCTGAACTACGAGCTGTCGAGG
TCACCACCTATGCCTAGATGCTGAAAATAGGACAAATAAATCTACAAGGCTCAGCAACCG
CGACCACGGAGCTCCGAGCAATAGCGGTGAGTCTCGGGCTCGACGTAGTGCTCGTCCAGG
AGCAGTACAGCGGCGGCTCCGCTGCGGCTATCCAGGCTGGCACAGTCGCCAGCGCTGGGC
TATTTGTCTTTAATGACCAAGTGGCTGTCACCGTCTGCGAAGATCTCAGCAATGCACACT
GCCTGGTGGCGCACTTACGAAGTCAGGACCTGGATATATACGCGGTGTCGGCGTATTTCC
AATACTCGGATGACCCATCGATCCACGTAGAGGGGCTGAATCGTGTACTGGACGCCCTGC
GTGGGCAGGGTGTTCTCATCTGCGTGGACTCGAATGCGCACTCACAGATGTGGCATTGTA
AGCGAGCGCAATGCGTCGGGCGCGGACCAGAGGCCGAAAGAAGACGGACCAATGTGGAGG
GCCTGATCACCAGCCGCGACCTGATCATCCACAACCAACCGGGAGAGCCAACAACATTCA
ACAGCCCTAATGGCTCCAGCAATATAGACCTAACACTGTCGACGCGCGGGGTCAACGTGT
GTCGGTGGAGGGTGCATGAGGATGTGAGTGTCAGCGACCACCGCCTCATCACCTTCTCTG
TCTTGGGAATGCCGACACGCGCTGATGGAACTACGGAGCGCATGGAGGAGTCCAAATTCC
GCACAAGGCACGTGGACTGGGAGCTCTTCCGCGGTACCCTTAGCACCAGGATGGAGGGAC
TGGCCAACACAGGCAATGCAGAGCTGATCTGCTCATCCTACACAAAGATTCTGCAGCGAA
CTGCGGAAATGACTATTGGGCGACGGACTCACAGCGTTACTGCAGGCTACGAATGGTGGA
CCCCGGCACTGGATCAGCAGCGTCGCCTGGTAGCCAGGGCAAGACGCGCCTGGCAGAAGA
CGCGACGCGCGGGAGGTGCTGCTGAACAGAGGAGCCTCGTGGAATTGCGTGCGGCTAGAC
GGACATATAAGGAGGTAATGAAAGCGGCTGAACTCTCCCACTTCCGCGCAGTGGCTAACT
CCGGGAATGAGGACCCGTGGGGAATGGCCTATCGGGTCGCCAGTGGCAGAATGCGCCCCC
CACAGTCCGTCCTGCGCGGTATTAAAGTCGCCGACGAGCTGACCAGGGACACAGGCGCTA
CTATGCGCTCATTGGTACATGCACTGTGCCCGGATGATGACCCGTCGGCCGACACTGTCT
ACCACCGTCGAGTGCGGATATTCGCGGCGTTCCCTCCATCAACTTCGGAATGCACCGATA
TGATATCCGTTGAAATGCTGGGGAATATAATAACCAACCTGCCTAATACATCGCCAGGTA
GCGACGGTATAACGTCGCGCATCGTCCGTGAGGCCTGGAAGGCCACTTCCATCGAAATGC
ATGCGATGTACGGTGCGTGCATCCGACAGGGCGTGTTTCCGGAGATCTGGAAAACTGGCA
GGCTAGTGATTCTGCCGAAGGGCAACGACAGACCGCTGTCGGATCCAAAGGCATACCGAC
CAATTACCTTGCTCCCCGTCTTGGGCAAGATATTGGAGCGGATCATCTTGTCCTGCGCTC
CGTGCCTATATCGCAATATCTCTTCCTCCCAGCACGGCTTTACCGGAGGGAGGTCCACGG
TGACGGCCCTGCGGGCTATACAGAACATCTGCGCAGAGTCGGCGTCTAAGTACGTCCAGC
TTATCCTGCTAGACATCTCGGGCGCCTTCGACAACGCCTGGTGGCCGATGGTCTTACTCA
AGGCCAAGCGCGCTGGTGTGGGCTATAACATATATCGCACCCTAGTCAGTTACTTCGTTG
ACCGTAAAGTTGGCCTGACGGTCGGCGACCGGGTGGTGTGGAAGGTCTCCACGATGGGCT
GCCCGCAGGGTTCCGTGCTTGGGCCTGCTCTTTGGAACCTCCTCATGGACGACTTGCTCC
GGGTGCCGGTTCCGGAGGGGGTTAGGCTTCTGGCTTATGCCGACGACCTAACAATTATCG
TCGAGGCATCATCGCGGGCTGACATCGAGCGCAAGTCCTCTGATTCCCTTGACGCGGTAG
CTGAGTGGGGTCTACGAAACCGCCTATCTTTCTCGGCCGAGAAATCGCAGACAATGACGG
TAAAGGGTAAGCTCCAACGTGCCCCATTGATCAAAATGAACGGATCGAACATCAGATCCG
TCGTGCAAGCCACGGTACTGGGTGTCACGCTCGACTGTTCGGGCTCTTTTGCTGCCCATG
CGGCCTCGGCCGGGGAAAGGGCGAGCGCGTGCTTCGGCAAGATGTCCCGCGTATCGGCAT
CGTCGTGGGGGGTGAAATACCGGGCCCTTAAGTTTATATACTCTGGGACATATGTCCCGG
TAATTACATATGCAGCCCCGATTTGGTTCCACCGAGTCGGGTTGCATGTAGTAAGGAGCG
CGCTGCTCAGGACTCAGAGGCCTTCGCTGACGTTGCTCACAAAGGCCTACAGGACGGCAA
GCACTGCGGCTCTGCCGGTGTTGGCTGGCGTGTTGCCGGCAGATCTCGAGGTGCTCTGGG
CGGGTCGTCGTGTCGAGGTGGCTGGCTGTGCTGTTGGGAGTGACCGCGGGGAGAGGATGA
ACCAGGTCCGAGAGGAGATCCTTGACCTGTGGCAGGAGCGCTGGTTTAACAGCCAAGACG
GCAGGGAATTGTTCCGGTTTTTCCCTGACGTCCGCCTCCGAATGGAGTATGTCTGGGTCG
AACCCGACTACGCGACATCACAGCTTCTACTGGGCCATGGATCCTTCAATGACAGGTTAT
GCAGACTGGGACTGCGCGAGGATCACACCTGCCCCTGCGGAGCGGTTGAGGAGTCTCGAG
ACCACGCTCTCTGGACATGCGCGCTGTACGACGACGCGAGGTCGGACCTGCTGAAGTCGG
CTAGAGGAACCCTAATTGGCCCGCTACATCACGGATGTCTCGTGGAGAGCCCCGACGTTT
TCGAGGCCCTCCGGAGGTTCGCGCACACCTGGCATAATCTGCGAAAGCAACTCTAAGCCT
GGCTTGGTAGAGGACTGTATGCGCGTCACTCATGTGGTTCGTTTTGTCATAAGCCCCAGA
TGGGGAGAATTGTCACCGAAGGGACGGATAT
(4891 bp)

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