SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27140_c1_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_and_BTB_domain-containing_protein_17-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001709 P cell fate determination
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007298 P border follicle cell migration
GO:0007422 P peripheral nervous system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008360 P regulation of cell shape
GO:0016476 P regulation of embryonic cell shape
GO:0017053 C transcription repressor complex
GO:0030707 P ovarian follicle cell development
GO:0031208 F POZ domain binding
GO:0031987 P locomotion involved in locomotory behavior
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035147 P branch fusion, open tracheal system
GO:0035151 P regulation of tube size, open tracheal system
GO:0040003 P chitin-based cuticle development
GO:0042675 P compound eye cone cell differentiation
GO:0042682 P regulation of compound eye cone cell fate specification
GO:0042803 F protein homodimerization activity
GO:0043388 P positive regulation of DNA binding
GO:0045467 P R7 cell development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046843 P dorsal appendage formation
GO:0046872 F metal ion binding
GO:0048053 P R1/R6 development
GO:0048666 P neuron development
GO:0048750 P compound eye corneal lens morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
GO:0060446 P branching involved in open tracheal system development
Transcript
Level		FPKM:10.70 TPM:9.01
ORF EntryO_TrvaMG16581_complete:A_TrvaMG_comp27140_c1_seq5
Sequence
(Nucleotide)
TTTTTTTGTAATGATTGTAGAGCTTTTATTTGTCAAAATTGTATTATTACAGCTATGATA
TGCTTATATTTGTTTCAAAGGTTACAGTGATCAACAGCAAAAGGGTTTTATGATTGTTGT
ACAATTGACTAAATATTACATCGATTGATCCTCTTTTCATAATGATATACTGTAATAAAT
TATTTTTTAACAAAAAATATTGCTCATCGTTACATTATGATCTAGTAATTGTTAAGGCAA
ACAGATTTCATTATTCTAGAATATCAACAATTAATGTTAAACAAAACAGCTCAAAGGATT
TAGTAATCGTTTTCATTCGATGAATAAAGTGATTACTAAAATTCTATAAATAAAAATGAA
CTTAAATTATTTGAACTTGTGTTTAAAATATTTGTATATGCATAAAAAAGTTAGATGTAC
TCACAAACAATAATATGTTTAGAGACCCACTTATGAGCTGTATTTTATGCTTATACAAGA
ATTCTCATTCTCACGAAAGTTTAACCTAAATAACTTATTGATATGAACGAACAATAAAAT
AAATTGTACCAATTTACAGTAGTTAATATACCTACAGGAACTTAGACAAAATTGCAATTT
AAGTTCTATATTTAGGTATGCCACTTAAAGTTTAAAAACAAATATAATAATAATTTAATA
AAACGTTTTTCTTTTGTGAACTTTTAAAGATTTTAAATCACGTTTTAATTGACTGGTAAA
TAAATAATTTTCAAAATTTCGGGAGTCGTTAATATTGTGATTAGCGATCAGCACTTTCAT
GCTTAAACTTGTGTTAAAATCAATCTTGCATAAAATTCATGTTTCAATTTTAATCAAGTT
TTTAACAGGCTATGCGTTTACATGAGTACCATTAGTACCCAATTCAAAATATGAGTACCA
TTAGTACCCAATTCAAAATAAAATCTCTAACATAAAATAAATACCCACTTTAGTGTTACG
CTAAATTAAATGATTTTGATATGATTTATTGTTTGATTCATATGAAAGAAAGTAATTGCA
CTAATCACATACCATAACGCAAATTACAATTTTAACCATAAAATTACTTGGATTCTGTTT
CTATTCCCTACGTACTCTATGTTTCGTGATTTGCAGCCTTTATATAAGTCTCGTATAGGC
AAGAGGCACTCTAAATATAAAACCGTGGTCACAATTTAATATATATAAAAATGAATCTAC
GTATGTAAACTATATCAAACATGAAATATTTCGTGCTAGTGTTCCACGTTGCGATATTTA
GTATGTATTTCTAAAAAAATACGTACTCCAAATCGAAACTTAGGTATAATAATATAAATC
TATAATTCTATATAATTACGCTAACGGCTTGTGAACTCTGCGGGGACGTGAAGAGCTTGC
TGATGTTAAAATTTGAATAACTGCACTTAGAGATATGTTAGACACTGGCACTAACAACAT
GCATACCTAACAACTATCATAGATCTAATCTATATTATTATCGTCAATAAATAGTTTCTT
TAAGAAAATCGGGAAATAAAATATAATCTCGATTATAATTATCATCCAGCACTATAAAAA
CTATTTTTAATTAGACTCTTATAAAAATCTTTAATTCACTTCTCTCTAAAATTTATTTAT
TGCTAATGATTGTTTGTAAATATGATATCTTTCTTAAAAACAATAAGAGGAACATTAATA
AAGTATCTGAATTGCTTAACATTTGGTAAATGTTCTGTAAATGAAAATTAAAATCAGTGC
AGCTTTTCAAATAGCAACATTTTTGTTAATTTTTTTTTGTATTTTCTTTTTTTATATCCA
AATACTATGCTCCGGGAATTAATGCAACTACCAATCTATTTACCTAAATTGTTTAATTTT
ATTTTTTGCGCGTTTTTAATCTATAGACCGATACTTTACATATCTGCATTTTTTGCTCGT
TTTTAATTCGAATTTTACAACAAATCTTCCTTTATAATATTTTGTAATTTTTCTATGAAG
AAAGAACTCACAATGTCAAGTTTAATAATTTTAGTGAGTTTCAATACCGAATTAACTATG
GAATGTTGTCAGCTTTACATAAAACACACTCCAAGAAATCTAGTTACCAAACACTTTTAC
TGTTAATTAAATACGATAATCTTATAAATATTTTACAAAATTTCATCAAAGTCTTCTCGA
TTTGTTCGTATAACATAACAATACAACGATATCGGTTTTACTACAAACATTCACGTCCGG
ATTATCTCACAACATTCCATAAAAATCAATAAATAAACAACTAATCGAATGGTCTACTTT
GACATCTAACGGTACTCAGGGCTGGCAAAAAAATTTAGAAGATACATTTCAATAATAATT
ATCACTTAAAAAGTACCTATCGGTGGAATCGACAACCTACATATTAAAAGTGAAATTGGA
ATAATTTTGGAATGTAAGGCGTTTGATCGAATGATATATTTTTCATAAATTCAGCCAAAC
AACATTATTTCACATTTAAGAGATCCTAATCACTAAACTTAAAATAGTGAGATCTAAAGA
GTAACTTTGTGACCTTGAAATTTAAGGTCATCAGTTACTTAGAGGTTCGTCTCACTGAAA
ACATTAGCTTAGAAGTATGAATAAGAGTGAATTTTTAGCCGACTTTCCAAAAGAAGGAAG
TAATCAATTCGTCTGTATTTTTATAGTTGTTACCCCATTATTTTAGATTGGGTCAACGAA
TCTGACTGGTATTTTTTGTGCTATTCTTGAAAAATGGAAGTCCGTCTTTTTTCTATTCGT
AAGAAAATATCATTTTATTTGATAACTCATTTGCAACACAGGCAAATTGCCAGAAATATT
GTGCATTTAAATTAAATCAAAACTGTTTACATCAAAATAAATCAAGACTTACCAATGAGA
ACAGCTGATAATAACTGAATTGAACGTATTTAAATAAGAACATCTTTATTTTTATGCGAC
AAAGGCGGCGGCAGATAGTAATAAAACATTAGTTAATGAGCCTATATATTTTCTTAGGCA
TTTATCAAATGCTTACAGTGACACGTACCCTGAAATAAACCTTAATTTTTGATTCAGAAA
ATTGTTCGAAATGCCTAATAGTAAATCTGAGATCGACACTTTACATTCCCAGATGTTGTC
GTCATAACTTTTATATTATCACAGATCTTTTCCTAAATTTATAATACTTTCTTTTGGTAA
GATCTCGACGATCTATCACTTAACGCCTAAATATTTTAAATTTTATTTCAACGCCTACAT
TCGAATCGAACTGGTTAAATACAAGACGTAGGTCAGAGCACCTCCTAATTTCAAAGATAT
TTTAATTATTGTGATATGTTTAAGATCAAAATATACGAAACAAACAAAAAAAATCTATCG
ACTAGCAAATTATAAAATTTTAATTACGTTCATAAAACATCAGCCGTTGAGTACCTATCA
GATATCAAGAAACATATTTTATTAATCTTACAGACTAAGGTAAAACGACTATTCATTCAA
CACCAAATCAAAGCTTTAATTTTTCGCGTGGCGATATGTTATATTATAAATAAATAATAA
TATGATAACATCATGTGAACAAGTAATAAATAACAATCATGTTTATATAATGTGGGTAGT
TTGAAGTAAAACAATAATGTCTTGTAAAACAATATTTTTAACATTCATAAAATATCCCTG
TATACGACTCTGTTGCATTTGTTGAACACAGTTATTATTGTGAGAAACATAAAAACAATG
CTGAAACATTCAGTAATAATTATAGCTCACGTTATATTGTGTACTTCTGTAAAAACTAAT
CATGAAATTATATTTTCCACTGGCGCGACTTAAACTCTTTATCAAAACCTCAAGTAGGTA
GGTATCCATTTTAATAATATATTATATTCTTACTAGAGGTTTTTTTCATTACGTTATGAT
ATTATGGACGCTATTAGTAAGACAGCAATTGACAGCGATGTTACATGTGTTATGTGATTT
GAGGCAAAATTAGACCACTTCCATATGTTTTGGAATGGCGGTGGTCTACCTGGTTCTCAG
TGGGTTTTCTTTTATCTAAAAAGAAAATGCCTGAACTTAATTGGCCCTCCCTGCAAGTAC
GATGCGGTTCAGGGTCCAAACCCCGGTTGAGGACGCTGCACGAGGTTATGTGGAAAATAA
CGCCGCTGGCTATTATACCTCCACCGTCTAGAGCTAGAAGCCAACTAAGAGGCTTCCAAG
AGAACGAGCTTCTGTACGTTTACTAGCTCGATCGACATGCAGTAAAAAAGGTCTAGTAAA
AAACTAGAGATGATAAAATAATTCAACGTTTAAGTCAACTATTTAAAAAAACGAATTACT
TATACAGAATCAGAATTGGTCCCAAAACGAAATATCCAAACAAAATTAATTACGCAATAA
TATGTTTCCAGAAATGTATGATGGCTTTCTCTTCACCTAGTATATGCCTCTAGAATGGTG
TAGATACCAAATCTCCAAATGATTCTACTGAAGTCAAACAAAATGCGTAAGTGCCACGCC
AGTATCTTTAGAATATATTTTGAAAGCTCAAATATATGTTTACCTACTTCACTGTTATAC
AGAAAACAAACTTATGTTCAATAGGCACTGTTTTTACTATTCCCAATTGATAATAAAACG
TGAGTTTGTAGTATGAAAATACATAGAAAATTTTAATATATATATCATAATATATAATAA
TTTTATAATGTTACGTCTCCCTTTTAGTTTAGATAAGTCTTCGCAATTCTCAAACTCGAT
TAGATTTTATTGAAGTAATGATGTTTAGAAAATTAGGCAGAGACGTAACAATCGGACAGA
AATGAAGGGTTTAAAGCTTTGATTCCCATAATCACATCCACAACTCTCCCCATTACTCCA
AACACAGTGCTACAGAAGCATTTATTATCTAATTAATTTCCTAAAAATTCATCATTATCA
AACTATATTTTATTTACATTATTTAATTATATGTCGTAATATTGCTTTTAAGTTACTTCA
GGGGAGCGTGCTTCGTTACATCCAAAGACAATAATTAGTATAAATCTCAAATCCCTACAT
TATTTTAATAATTTATAGGTATATTATGAAGTGCACGTGTTCAAAATATGAATTGTATAT
AAATCAAATATTTATTTATTTAATCTTATACAACGACAATTAAAAAAGTCGTTTGTGTTT
CAAACAATCATGCCACTTCAAATATACTTGATAATGTTTTACGATTTGTTTGTATTCAGT
AATAGTCTAAGTATGTATACGTATAACAAATATAAGCAAATTATTAAGAAAGAAATAAAT
ACATATAAAGCGAAATGAACATTAAGAAAATGGGCGAATTAATTTCATTCCCAACATAAA
ATTAACGAAGTTTCACTTCTCTAACTAGCTTTGGCTATGCCGTCTAATGACCTCACCGTA
AATGATTCCTCACAAGCATAAACAAAGACAGCACCTATAGAATCAAAAACATGATAGAAA
AGGAACAAAACCAACTGAAATATTAATTTTAAAAATATGTCTAAAAATTAACAAATGTGT
TATTTACCTATTAGTGAAATATAAAATATTTATCATTCAGATCACAGTAGCGGCGTACAT
CACATTCTTAACTTATTTAAACATAATAACAGTCACTGTTTGTTCACTGATACAATGCCT
GTCTCACCGTCCACCGTCCACCGTCCGTCGACAAACCTGATGAAAAATTAAACTAAAACG
TGATCGAAGGCTAATAGTGCTCTCTACTTATCACATGTTCACTGGTGTGGACTTTCTTCT
TCCGTGTCTACGGGGCTCGGTGATAAAAACTTGCGTGCGTATTTGGGGTAATGTGTCTTT
TCGTGCGCCTTTAATATAGTCGAACGTGAAAATGTTTTCCCGCATAATCCACACCGAAAC
GGTCGTTCACCTGTGTGAACTCTACAGTGATCCTTCATATGGTGCCGCAGTTTAAATGCT
TTGCCGCAAAATTCACATTTAAACGGTCTGTCACCGGTGTGCACTGGTAAATGTGCTATT
AAAGATGATACGTCTGGAAAGCTTTTTCCACAAAATTTACACAAAACGACGTTCCCAGGC
TCAACTGGACCAATGTCCAAATCTATTGGAGCTTCTTCCGGATGCATATTCATGTAAGTG
GGTTCACTGAACTGTCCTATCATGGGTATGCCTAAAGATCTTCCGAGCATTGCATCGCGA
TACTTGAGCGTATCGAGCGTGTGAGTCGTCAGTATGTGCCTGGTCAGTTTGCTCTGATGT
GGGAAGGAGGCGCCGCAGTGAATACAAATGTAACCCCTGTCCCCCTCGTCAACACGCCCC
CTACCGGACCCATCGTACTCCGGGTCATGTTGCAGTCTATAGTCTGTTGAAACTTCACCA
CCCCTTTCTTCATTATTTCGATCCCAATCAACCAATTCTTTCTTTAAAGACAATGGAGCT
TGCTGAACTGGGGGAAGTCCTGAAGGTCCTGGTATTGGCTCGCTCCGGGGACTAGATAGT
GCCGGGTGTGAAGGATGAGGCAGGCCTGGATGTGGGATAGCATTGAGTACACTCAACCGC
TCCACCGGAGAATATCGAGTACTTAAGACATTTGAGTTGTGACTGTTTATAGTCATATTT
ATACCCATGTTCTCATTCTGTGCTCCATTTGATCGTAGGGTTGCTGAATCTTCTTCTGGT
GATGACGACCGCATTAGTTCGTCGGGCGGTTCATCTTTTGGCAACGGTGGATGCGCTAAA
GATGGTACATCTGTTGTCGTTTCTGGTCTAAATCTTCGTACAGATAACAATGGAGATATG
CGAGTTGGCGATGATTCCATTGTGTCTCTTTGGTCACGAGTGTCTCTTATTTCTCTAGGA
TCCCTTAAATCTCTGGGTTCCCTCAATTCTCGAAGATCTCGTGCTTCTCGAATATCTCTT
TGTTCTCGAGGATCTCTTAATTCGCGCATTTCACGCGTATCTCTAATTTCTCTAAGATCT
CGGGGCTCTCTCTGCTCCCGAGAGTCTCTTGGTTCTCGTTGGTCTCTAGATTCACGTGAT
TCTCGTGAATGACTATCTCTCATATCACGGGAATCTTTATCTCTTTCTCGTAAGTCTTTT
AGTTCACGTCTGTCTTCTCTTTCGCGAACTTCTCTGCTTTCGAGCCGTTCCGGATTTTCT
ACGTTTTCTCTACTATCTGGATTCTGGCACTGCTCCATTGGCTCGGTAACATTCCTCGTT
TCGATACCTGCAGCGCTTAAGGTCGTCATTTCAGCTAAACCTTTTACCTGAAGACTTTCA
GCAGTTCTTAGAAGAGCTGGCAGCTGACAATACTGAACGTTGACTTCGCCTTTGTACATG
AAGTCGACCAGGGTCCGTAATTCGTCCAATCCAACGTCCTTTAGAATTACGATAGGATGA
CGTGCAGGATGATCCACGAACAGTGAACGGAAGTACGAGGAACACGCAGATAGAACTACC
TTGTGAGCTCTAATAGATGCACCTTCGGCACAGGCAAGCGTGACGTCAACCAAACTTTCG
TCGTGCAGCAACTGGCTGAATACTCCCAGCAGGTTGCTCTGATGATTGTTCCACCTTAGG
CAATAGTGCTCACTTCCCATGTCTGAGCTAGCTCCCGCCGCTTGATGCGAATCGGCGCAC
TCCGGGTTCCATCCGACGACTGTCGCCGACACAGACGGGCTGAAGGGCTCGCTTCAGGCG
TCACGGTATAAGTGACACCGGTGATGAGCAATAGGTGTGAATTGCGCGTTTTGGTACCGC
GGCGCGGGCGTCGGCGTGAAGCCGGACGGCAGGCGCATCGGCGCGCCGCCACCGGCTGTG
TGGTCGCAGGGCTGCGGCGCGGCGGCCGCGCTACATGTCACTGTGCGGCGAACGCGCTCT
TCGCGCCGTGGTCACCGACTCTCAGTGGCGTCGCCGTCCTACTGTCTGCCCGACGGTCCG
GACG
(7924 bp)

- SilkBase 1999-2023 -