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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27138_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.10 TPM:0.08
ORF EntryO_TrvaMG16569_complete:A_TrvaMG_comp27138_c0_seq4
Sequence
(Nucleotide)
AAAAAAGATTTATTAACTTAGAGTCTTGATCTTTATTTATTTCAACAGGTTATGGGCCTC
TCCCTGCCTGATTAGTGTAGTAAAGTTAAAAAAAAAAAAAACATTATAAAGTTAATTAGT
CATTTGTGCTTAAAAACGTAATAACCTAAAAAAGTGTACACGCGGTCGCAGAAGTTTTTA
CAATTTCAGCTATAAACATTAGAAACATGGCATCTAATGGATCCTTAATACAAATTGAAA
AGCTTACTGGCAGAGAAAATTGGACAAGCTGGAGTTTCGCGGTAAAGGCTTACTTAGAAC
TTGACGACTTATGGGAATGTGTCGAAGGCACTTGTATTGATCCAAAAAGAGAAAAAAAGG
CGAAATCCAAACTAATTTTATTAGTCGATCCAGTAAACTTCATACACATTCAGGATGCGA
CTACGTCTAAAGAGATTTGGACAAATTTGTCGCAGGCATTTCAAGACTCAGGTCTGCTCA
GAAAAGTTGGATTATTAAGAGACTTAATTAATACTAATCTAGATACAAGCACAAGTGTAG
AAGATTACATTAACAAAATAATGAGCTCAGCTCATAAGCTCAGAAACATAGGATTCAATG
TTGATGATGAATGGCTTGGGACTCTGATGCTTGCAGGTTTGCCAGATAATTACAAACCCA
TGATTATGGGTATTGAAAGCTCCGGTATAAAAATAAATGCAGATTTGATAAAAACTAAGC
TTTTACAGGAAATAAAAGATACAACATACAGTAATTCAGCTTTATATGCAAACAAGAAAA
ATTTTCAAACTAAGCCAAAAATCACTGAGTATCAGTCAAAAACTAAGGGCCCTAGATGCT
TTAATTGTAACAAATATGGGCATCTTGGCAAAAACTGTTGGTTTCAGAAAAACAAAACAC
ATACTAAAGAAGATAATAAAGGTTTTGTGGCAGCTTTCTCAGCCATGCAACCAAGTGACT
CTTTGCACTGGTATGTAGACTCAGGAGCTTCAATGCACATGACAATGCATAAAGACTTAT
TACAAAATAAAACAATACCACCAATATCATCAATAAAAATTGCAGACAATAACATTTTAC
AGGTTGAAAGCTGTGGGGATGTGATACTTCAGATACCCATTGAAGATGGCAGCAGCAATG
AAATTTTAGTTAAAAATGTTTTATATGTGCCAAAGCTGTCTACTAATTTATTATCAGTTA
GCAAAATAATAAAATCAGGTTGCAAAGTGGAATTTAATAAAACTGGCTGCTCAATATATA
ATTCAAATAATCATAAAGTAGCCACAGCAAATCTAATAAATGATACATATAAACTAAATA
CAAACTATAATAATAAATTTGCCATGTCAGCAAAAACAGAGTTAATGACACATCTGTGGC
ATCAACGTATGGGCCACCTTAATTACAATGATGTTCACAGGTTACCCGACTGTACAACTG
GCGTCCAACTATCATCACAGAAAGAAAAGCATGTATGTATAAGCTGCCTAGAGAGCAAGC
AGACAAGGCAATCATTTCCAAGCAATGGCTCCAGGGCAAAGAGTTTGCTAGAGCTAATAC
ACACAGATGTATGTGGCCCAATACAAGTTGCTTCAATCGGCGGTGCCAGAACCTGAAACA
AAAATAAATAATGAGAACCAAGAAGTACATGAAAAACAACAATCAAAATATGTAAATAAT
AATAAAAAAAGGAATAATAAAGAACAAAAATTAACACAAATATACTTACCATTGAATGAA
CAAAAATCTGATTTAATTACACAAGATGATGAAAACACGGATGATGAAGAACAGTATTCA
AATAATCTGAGTAATAGTAACACAGACACTTCAAATAATACAGACTATGAAGATCCACTA
GATGATACATACTTACCGAGTCAAAGTGTTGACATATCGCCTACAAGTGAAACAGGGATT
AAAACCCGTAGACAAAGAAAGTTGCAAATAAATAATGAAAGTTCATCTCTATACATTTGC
ATGAACAGTGAATCTACATCAAGCCTTCTTAATAATGATCCCCAAAGCTTAGATGAAGCC
CTTCAGAGTAATGAATCTGAAGAATGGAAACAAGCAATGAAAGAAGAGTACGATTCTCTC
ATTCACAACAATACTTGGTCTTTAATAGATTTACCAGAAGGGAAGAAGTCAATTCCATGC
AAATGGGTTTTTAAACGAAAATTTAATGATACTGGAGAAATAATTCGTTATAAGGCTAGA
CTCGTAATCAAGGGTTACAAGCAAAAAGAAGGAATAGATTACAATGAGATATACGCACCA
GTTGTACGATACACCTCGATCAGATATCTCATAGGCATAGCAGCAAAATACAATTTAGAA
ATTCATCAAATGGATGCCATTGCAGCCTTTTTGCAAGGAGATGTTGATGAAAACATTTAC
ATGTCTCAACCACCCACTTTTGATCGAGGAGAGAAAGTATGCCATTTAAATAAAGCTATA
TATGGTCTCAAGCAGGCTAGTAGACAGTGGAATAAAAAGCTAAACTCAGTTTTGTTGGAA
ATTGGCATGAAACGATCAAAACTTGATCCTTGCATTTATTTTCGTATAATAAGCAAACAA
GATATTTTATTTATCACTGTTTATGTCGACGACCTCCTTTTATTTTATAATCGTTCTGAA
ACTGCTGAAAAAATTAAAAAAAGGCTCAAAGATAATTTTAGCATGAAAGACATGGGAAAA
GCAAAACAATGCATTGGATTCAGAATAACACATGAAGATAAAAATAAAATATCACTGGAT
CAATCAATGTATATTAAAAAGATACTTAGTCGTTTTGGTATGGATGATTGCAAGCCAGTC
TGGACTCCATGTGATCCAAACATTCAATTAAAGAGAGCTGAGAATGAAAAAGAAATATTG
AGAAACATACCATATCAAGAAGCTATTGGATGCTTACTATATTTGTCACAAGGGACAAGA
CCTGACATAACATATATTGTTAATTCATTGAGCCGGTACAATGGTCAACCCACTACGGAG
CATTGGACCATACTGAAGAGAGTATTAAGATATCTAAAAGCCACCATTGATAATAAATTG
ACTTATGTCGGTAACTCAGAAGACAATGTTACAGGCTATTGTGATGCTGATTGGGCCAGT
CACTCAGAAGACCGCAGATCCTGCACAGGATACATTTTTATCTTTCAGGGTGCTGCTATA
AGTTGGTGCTCAAAGAAACAACCTACTATTGCCCTATCAAGCACGGAAGCTGAATATATG
TCTTTAGCCACTGCTGTACAAGAAGCACTTTGGCTGAAACAATTAAATGAAAATTTCTGG
CCTGAATCATCAGCCACACCTATTATTGTATATTGTGATAATCAAAGTGCCATTCGCATT
TCAGGAAATGAAAGTTATCATCAACGCAGCAAACATATTGATGTTCGCTATCACTTTATC
AAAGAGAGGATTACTGCCAAACAAATCCTAGTAAAATACCAAAGGAGTGAAGACATGACT
GCGGACATTTTGACCAAAGGACTGCATAGACCAAAACATGAAGCTTTCAGCAGAGCGATG
GGTCTGCGTTCAGGAGAGAATGTTGGGAAGAACGCAAACATGCGCTGCGCCTGATGTTAT
AGTGTAGGCAATGCGCTCGGATGAATGGTTGCGCGTTGATGATGTCAGAGATTTCTTCTA
CGCGTCACTTTAGTTGTAGAATGTCATGTAAAAAGTTATTGTGCTTGTAATAAATA
(3716 bp)

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