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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27138_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:7.77 TPM:6.54
ORF EntryO_TrvaMG16567_complete:A_TrvaMG_comp27138_c0_seq3
Sequence
(Nucleotide)
AAAAAAGATTTATTAACTTAGAGTCTTGATCTTTATTTATTTCAACAGGTTATGGGCCTC
TCCCTGCCTGATTAGTGTAGTAAAGTTAAAAAAAAAAAAAACATTATAAAGTTAATTAGT
CATTTGTGCTTAAAAACGTAATAACCTAAAAAAGTGTACACGCGGTCGCAGAAGTTTTTA
CAATTTCAGCTATAAACATTAGAAACATGGCATCTAATGGATCCTTAATACAAATTGAAA
AGCTTACTGGCAGAGAAAATTGGACAAGCTGGAGTTTCGCGGTAAAGGCTTACTTAGAAC
TTGACGACTTATGGGAATGTGTCGAAGGCACTTGTATTGATCCAAAAAGAGAAAAAAAGG
CGAAATCCAAACTAATTTTATTAGTCGATCCAGTAAACTTCATACACATTCAGGATGCGA
CTACGTCTAAAGAGATTTGGACAAATTTGTCGCAGGCATTTCAAGACTCAGGTCTGCTCA
GAAAAGTTGGATTATTAAGAGACTTAATTAATACTAATCTAGATACAAGCACAAGTGTAG
AAGATTACATTAACAAAATAATGAGCTCAGCTCATAAGCTCAGAAACATAGGATTCAATG
TTGATGATGAATGGCTTGGGACTCTGATGCTTGCAGGTTTGCCAGATAATTACAAACCCA
TGATTATGGGTATTGAAAGCTCCGGTATAAAAATAAATGCAGATTTGATAAAAACTAAGC
TTTTACAGGAAATAAAAGATACAACATACAGTAATTCAGCTTTATATGCAAACAAGAAAA
ATTTTCAAACTAAGCCAAAAATCACTGAGTATCAGTCAAAAACTAAGGGCCCTAGATGCT
TTAATTGTAACAAATATGGGCATCTTGGCAAAAACTGTTGGTTTCAGAAAAACAAAACAC
ATACTAAAGAAGATAATAAAGGTTTTGTGGCAGCTTTCTCAGCCATGCAACCAAGTGACT
CTTTGCACTGGTATGTAGACTCAGGAGCTTCAATGCACATGACAATGCATAAAGACTTAT
TACAAAATAAAACAATACCACCAATATCATCAATAAAAATTGCAGACAATAACATTTTAC
AGGTTGAAAGCTGTGGGGATGTGATACTTCAGATACCCATTGAAGATGGCAGCAGCAATG
AAATTTTAGTTAAAAATGTTTTATATGTGCCAAAGCTGTCTACTAATTTATTATCAGTTA
GCAAAATAATAAAATCAGGTTGCAAAGTGGAATTTAATAAAACTGGCTGCTCAATATATA
ATTCAAATAATCATAAAGTAGCCACAGCAAATCTAATAAATGATACATATAAACTAAATA
CAAACTATAATAATAAATTTGCCATGTCAGCAAAAACAGAGTTAATGACACATCTGTGGC
ATCAACGTATGGGCCACCTTAATTACAATGATGTTCACAGGTTACCCGACTGTACAACTG
GCGTCCAACTATCATCACAGAAAGAAAAGCATGTATGTATAAGCTGCCTAGAGAGCAAGC
AGACAAGGCAATCATTTCCAAGCAATGGCTCCAGGGCAAAGAGTTTGCTAGAGCTAATAC
ACACAGATGTATGTGGCCCAATACAAGTTGCTTCAATCGGCGGTGCCAGGTATTTTACAA
CTTTTACTGATGATTTCTCACGAAAAGTCTATGTTTATATAATCAAAAGCAAAACGGAAG
TATTTGAAAAATTTATTGAATACAAAAACAGAGTAGAAAATGAGTTGAATAAAAAGATTA
AAATTTTACGCAGTGATAATGGTTTAGAGTATGTTAATAAATCTTTTTCTAATTACCTAA
AAAACAATGGAATATTACATCAAACCTCCAATCCATACACACCACAACAAAATGGTCTGA
GTGAGCGAATGAACCGGACATTGATTGAAAGAGCAAAATGTATGATGATTCATGCTGATT
TATCAAATAATTATTGGGCTGAAGCTGTAACAACGGCAGCATATATAATAAACCGTTCGC
CCACACATGCTTTATCAAATATTACACCTCATGAAGTATGGACCGGACAAAAGCCAGACT
TAAGCAATATCAGAATATTTGGTTGTCCCGCCATGGTGCATATACCCAAAGAAAAGCGTC
AGAAATTAGATAAAAAATCTCGTCAGCTCATCTTTGTTGGGTACAGTGAATGCACAAAAG
GGTATCGTTTCATAGATTCGACAACTAATAAAGCAGTGATCAGTCGAGATGTCTATTTTC
TAGAAGATAACATAAAAAGTAAATTAGAATCAATTTCCTTTCCAGAACCTGAAACAAAAA
TAAATAATGAGAACCAAGAAGTACATGAAAAACAACAATCAAAATATGTAAATAATAATA
AAAAAAGGAATAATAAAGAACAAAAATTAACACAAATATACTTACCATTGAATGAACAAA
AATCTGATTTAATTACACAAGATGATGAAAACACGGATGATGAAGAACAGTATTCAAATA
ATCTGAGTAATAGTAACACAGACACTTCAAATAATACAGACTATGAAGATCCACTAGATG
ATACATACTTACCGAGTCAAAGTGTTGACATATCGCCTACAAGTGAAACAGGGATTAAAA
CCCGTAGACAAAGAAAGTTGCAAATAAATAATGAAAGTTCATCTCTATACATTTGCATGA
ACAGTGAATCTACATCAAGCCTTCTTAATAATGATCCCCAAAGCTTAGATGAAGCCCTTC
AGAGTAATGAATCTGAAGAATGGAAACAAGCAATGAAAGAAGAGTACGATTCTCTCATTC
ACAACAATACTTGGTCTTTAATAGATTTACCAGAAGGGAAGAAGTCAATTCCATGCAAAT
GGGTTTTTAAACGAAAATTTAATGATACTGGAGAAATAATTCGTTATAAGGCTAGACTCG
TAATCAAGGGTTACAAGCAAAAAGAAGGAATAGATTACAATGAGATATACGCACCAGTTG
TACGATACACCTCGATCAGATATCTCATAGGCATAGCAGCAAAATACAATTTAGAAATTC
ATCAAATGGATGCCATTGCAGCCTTTTTGCAAGGAGATGTTGATGAAAACATTTACATGT
CTCAACCACCCACTTTTGATCGAGGAGAGAAAGTATGCCATTTAAATAAAGCTATATATG
GTCTCAAGCAGGCTAGTAGACAGTGGAATAAAAAGCTAAACTCAGTTTTGTTGGAAATTG
GCATGAAACGATCAAAACTTGATCCTTGCATTTATTTTCGTATAATAAGCAAACAAGATA
TTTTATTTATCACTGTTTATGTCGACGACCTCCTTTTATTTTATAATCGTTCTGAAACTG
CTGAAAAAATTAAAAAAAGGCTCAAAGATAATTTTAGCATGAAAGACATGGGAAAAGCAA
AACAATGCATTGGATTCAGAATAACACATGAAGATAAAAATAAAATATCACTGGATCAAT
CAATGTATATTAAAAAGATACTTAGTCGTTTTGGTATGGATGATTGCAAGCCAGTCTGGA
CTCCATGTGATCCAAACATTCAATTAAAGAGAGCTGAGAATGAAAAAGAAATATTGAGAA
ACATACCATATCAAGAAGCTATTGGATGCTTACTATATTTGTCACAAGGGACAAGACCTG
ACATAACATATATTGTTAATTCATTGAGCCGGTACAATGGTCAACCCACTACGGAGCATT
GGACCATACTGAAGAGAGTATTAAGATATCTAAAAGCCACCATTGATAATAAATTGACTT
ATGTCGGTAACTCAGAAGACAATGTTACAGGCTATTGTGATGCTGATTGGGCCAGTCACT
CAGAAGACCGCAGATCCTGCACAGGATACATTTTTATCTTTCAGGGTGCTGCTATAAGTT
GGTGCTCAAAGAAACAACCTACTATTGCCCTATCAAGCACGGAAGCTGAATATATGTCTT
TAGCCACTGCTGTACAAGAAGCACTTTGGCTGAAACAATTAAATGAAAATTTCTGGCCTG
AATCATCAGCCACACCTATTATTGTATATTGTGATAATCAAAGTGCCATTCGCATTTCAG
GAAATGAAAGTTATCATCAACGCAGCAAACATATTGATGTTCGCTATCACTTTATCAAAG
AGAGGATTACTGCCAAACAAATCCTAGTAAAATACCAAAGGAGTGAAGACATGACTGCGG
ACATTTTGACCAAAGGACTGCATAGACCAAAACATGAAGCTTTCAGCAGAGCGATGGGTC
TGCGTTCAGGAGAGAATGTTGGGAAGAACGCAAACATGCGCTGCGCCTGATGTTATAGTG
TAGGCAATGCGCTCGGATGAATGGTTGCGCGTTGATGATGTCAGAGATTTCTTCTACGCG
TCACTTTAGTTGTAGAATGTCATGTAAAAAGTTATTGTGCTTGTAATAAATA
(4372 bp)

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