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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27138_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:5.46 TPM:4.59
ORF EntryO_TrvaMG16564_complete:A_TrvaMG_comp27138_c0_seq1
Sequence
(Nucleotide)
AAAAAAGATTTATTAACTTAGAGTCTTGATCTTTATTTATTTCAACAGGTTATGGGCCTC
TCCCTGCCTGATTAGTGTAGTAAAGTTAAAAAAAAAAAAAACATTATAAAGTTAATTAGT
CATTTGTGCTTAAAAACGTAATAACCTAAAAAAGTGTACACGCGGTCGCAGAAGTTTTTA
CAATTTCAGCTATAAACATTAGAAACATGGCATCTAATGGATCCTTAATACAAATTGAAA
AGCTTACTGGCAGAGAAAATTGGACAAGCTGGAGTTTCGCGGTAAAGGCTTACTTAGAAC
TTGACGACTTATGGGAATGTGTCGAAGGCACTTGTATTGATCCAAAAAGAGAAAAAAAGG
CGAAATCCAAACTAATTTTATTAGTCGATCCAGTAAACTTCATACACATTCAGGATGCGA
CTACGTCTAAAGAGATTTGGACAAATTTGTCGCAGGCATTTCAAGACTCAGGTCTGCTCA
GAAAAGTTGGATTATTAAGAGACTTAATTAATACTAATCTAGATACAAGCACAAGTGTAG
AAGATTACATTAACAAAATAATGAGCTCAGCTCATAAGCTCAGAAACATAGGATTCAATG
TTGATGATGAATGGCTTGGGACTCTGATGCTTGCAGGTTTGCCAGATAATTACAAACCCA
TGATTATGGGTATTGAAAGCTCCGGTATAAAAATAAATGCAGATTTGATAAAAACTAAGC
TTTTACAGGAAATAAAAGATACAACATACAGTAATTCAGCTTTATATGCAAACAAGAAAA
ATTTTCAAACTAAGCCAAAAATCACTGAGTATCAGTCAAAAACTAAGGGCCCTAGATGCT
TTAATTGTAACAAATATGGGCATCTTGGCAAAAACTGTTGGTTTCAGAAAAACAAAACAC
ATACTAAAGAAGATAATAAAGGTTTTGTGGCAGCTTTCTCAGCCATGCAACCAAGTGACT
CTTTGCACTGGTTACCCGACTGTACAACTGGCGTCCAACTATCATCACAGAAAGAAAAGC
ATGTATGTATAAGCTGCCTAGAGAGCAAGCAGACAAGGCAATCATTTCCAAGCAATGGCT
CCAGGGCAAAGAGTTTGCTAGAGCTAATACACACAGATGTATGTGGCCCAATACAAGTTG
CTTCAATCGGCGGTGCCAGAACCTGAAACAAAAATAAATAATGAGAACCAAGAAGTACAT
GAAAAACAACAATCAAAATATGTAAATAATAATAAAAAAAGGAATAATAAAGAACAAAAA
TTAACACAAATATACTTACCATTGAATGAACAAAAATCTGATTTAATTACACAAGATGAT
GAAAACACGGATGATGAAGAACAGTATTCAAATAATCTGAGTAATAGTAACACAGACACT
TCAAATAATACAGACTATGAAGATCCACTAGATGATACATACTTACCGAGTCAAAGTGTT
GACATATCGCCTACAAGTGAAACAGGGATTAAAACCCGTAGACAAAGAAAGTTGCAAATA
AATAATGAAAGTTCATCTCTATACATTTGCATGAACAGTGAATCTACATCAAGCCTTCTT
AATAATGATCCCCAAAGCTTAGATGAAGCCCTTCAGAGTAATGAATCTGAAGAATGGAAA
CAAGCAATGAAAGAAGAGTACGATTCTCTCATTCACAACAATACTTGGTCTTTAATAGAT
TTACCAGAAGGGAAGAAGTCAATTCCATGCAAATGGGTTTTTAAACGAAAATTTAATGAT
ACTGGAGAAATAATTCGTTATAAGGCTAGACTCGTAATCAAGGGTTACAAGCAAAAAGAA
GGAATAGATTACAATGAGATATACGCACCAGTTGTACGATACACCTCGATCAGATATCTC
ATAGGCATAGCAGCAAAATACAATTTAGAAATTCATCAAATGGATGCCATTGCAGCCTTT
TTGCAAGGAGATGTTGATGAAAACATTTACATGTCTCAACCACCCACTTTTGATCGAGGA
GAGAAAGTATGCCATTTAAATAAAGCTATATATGGTCTCAAGCAGGCTAGTAGACAGTGG
AATAAAAAGCTAAACTCAGTTTTGTTGGAAATTGGCATGAAACGATCAAAACTTGATCCT
TGCATTTATTTTCGTATAATAAGCAAACAAGATATTTTATTTATCACTGTTTATGTCGAC
GACCTCCTTTTATTTTATAATCGTTCTGAAACTGCTGAAAAAATTAAAAAAAGGCTCAAA
GATAATTTTAGCATGAAAGACATGGGAAAAGCAAAACAATGCATTGGATTCAGAATAACA
CATGAAGATAAAAATAAAATATCACTGGATCAATCAATGTATATTAAAAAGATACTTAGT
CGTTTTGGTATGGATGATTGCAAGCCAGTCTGGACTCCATGTGATCCAAACATTCAATTA
AAGAGAGCTGAGAATGAAAAAGAAATATTGAGAAACATACCATATCAAGAAGCTATTGGA
TGCTTACTATATTTGTCACAAGGGACAAGACCTGACATAACATATATTGTTAATTCATTG
AGCCGGTACAATGGTCAACCCACTACGGAGCATTGGACCATACTGAAGAGAGTATTAAGA
TATCTAAAAGCCACCATTGATAATAAATTGACTTATGTCGGTAACTCAGAAGACAATGTT
ACAGGCTATTGTGATGCTGATTGGGCCAGTCACTCAGAAGACCGCAGATCCTGCACAGGA
TACATTTTTATCTTTCAGGGTGCTGCTATAAGTTGGTGCTCAAAGAAACAACCTACTATT
GCCCTATCAAGCACGGAAGCTGAATATATGTCTTTAGCCACTGCTGTACAAGAAGCACTT
TGGCTGAAACAATTAAATGAAAATTTCTGGCCTGAATCATCAGCCACACCTATTATTGTA
TATTGTGATAATCAAAGTGCCATTCGCATTTCAGGAAATGAAAGTTATCATCAACGCAGC
AAACATATTGATGTTCGCTATCACTTTATCAAAGAGAGGATTACTGCCAAACAAATCCTA
GTAAAATACCAAAGGAGTGAAGACATGACTGCGGACATTTTGACCAAAGGACTGCATAGA
CCAAAACATGAAGCTTTCAGCAGAGCGATGGGTCTGCGTTCAGGAGAGAATGTTGGGAAG
AACGCAAACATGCGCTGCGCCTGATGTTATAGTGTAGGCAATGCGCTCGGATGAATGGTT
GCGCGTTGATGATGTCAGAGATTTCTTCTACGCGTCACTTTAGTTGTAGAATGTCATGTA
AAAAGTTATTGTGCTTGTAATAAATA
(3266 bp)

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