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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27136_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_insulin-like_growth_factor_2_mRNA-binding_protein_1_isoform_X4_[Papilio_machaon]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0010494 C cytoplasmic stress granule
GO:0010610 P regulation of mRNA stability involved in response to stress
GO:0010976 P positive regulation of neuron projection development
GO:0017148 P negative regulation of translation
GO:0022013 P pallium cell proliferation in forebrain
GO:0030027 C lamellipodium
GO:0030175 C filopodium
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0042995 C cell projection
GO:0044822 F RNA binding
GO:0045182 F translation regulator activity
GO:0048027 F mRNA 5'-UTR binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
GO:0070934 P CRD-mediated mRNA stabilization
GO:0070937 C CRD-mediated mRNA stability complex
GO:0097150 P neuronal stem cell population maintenance
Transcript
Level		FPKM:6.77 TPM:5.70
ORF EntryO_TrvaMG16555_complete:A_TrvaMG_comp27136_c0_seq4
Sequence
(Nucleotide)
GCGGCTGCGGCGTCGCGACTCGCGCCCGTCGCACAGCTAGTGCTCACAGTTCGGTCCTCT
CGTTCTTTAGTCACACGGCAACACTCGAGCGTTGCGATACAACCTCGTGTGAATGTGTCT
CATTACATCACTCCTTGCATTATATCAATTAGACTTCATAATATTCTCATTTCGCTAATG
TTATCAATGACAACTTTGTTCTAATAAGAATCGTCTCGGAACTGTCAAACCGGTCGCGTA
TATCCTGTGTTGTGTGCCTCTACTATTTACTAGCAAATTATTCATTGTACAACATAGTGG
ACTAATTGACAATCAACCCAAAATGGCGAAGTTCCGCAGATCCTCAAAGGTACTCATCAG
TGGGCTACCTCTGCATATCCGCTTCGATAACATCGAGCCGCTGCTCTCACAGTATGGCAA
CGTGCAACATTGCGATAAAGCGAACACTCGCGATCCCAACACCCAAGCGGTATTCATCAC
CTTCGAGAGCCCAGAGCAGGCGCAGCAAGCCATAAACGGTCTTAACGGATGCGAATTGGA
GGGATGTCGTATTAAGGTAGAGGCGGCGGAGCAGAACTCCCGGGGCGGGCGGCGCGGACG
ACCTGGCGGCGGCCGCGGTGGCGGCGGCGCTGCTGGCGGCGGCTCGCGACCCACCGACTT
CCCGCTGCGTCTGCTCGTGCAGAGCGACATGGTGGGAGCCATCATCGGCCGCCAGGGCAG
CACCATCCGCCTCATCACCCAGCAGAGCCGCGCTCGCGTCGACGTGCACAGGAAGGACAA
CGTCGGTTCTCTAGAGAAGGCCATCACTATCTACGGTAATCCCGAAAATTGCACCAATGC
CTGCAAGAGAATCCTCGAAGTCATGCAACAGGAGGCCAACAATACTAATAAAGGTGAAAT
TTGCCTTAAGATTTTGGCCCACAACAATCTTATTGGTCGCATTATCGGCAAAGGCGGTAA
CACCATCAAGAGAATCATGCAAGAGACCGATACAAAGATCACTGTATCTTCCATTAACGA
CATCAATAGCTTCAACTTGGAGAGAATCATAACTGTTAAAGGATCCATCGAAAACATGGC
CAAGGCGGAGTCGCAAATTTCAGCCAAGCTGCGTCAAAGCTACGAAAACGATCTGCAGGT
GCTTGCACCACAAAGCATTATGTTCCCTGGACTGCACCCAATGGCTATGATGTCCACTGG
ACGCGGCTTCTGTGGCGCTCCACCACCATTCCAGCCACCGATGTACGCACCTCTGGCCGG
ACCAGGGGCGCAGCAGGGGGCCGGTGACTCACAGGAAACTACATATTTGTACATCCCTAA
CAACGCTGTGGGCGCCATTATCGGAACAAAGGGCTCTCACATTCGCAACATAATTCGCTT
CAGCAACGCTTCGGTTAAGATCGCCCCTCTGGAGGTAGAGAAGCAGCAAGAGCCCCAGAA
CCCTCAGCAGGAGCGCAAAGTTACCATTGTCGGCAGCCCAGAAGCCCAATGGAAGGCGCA
ATATCTGATCTTCGAGAAGATGCGAGAGGAGGGCTTCATGTCCGGTTCTGACGACGTGCG
ACTAATAGTCGAGATCGTGGTCGCGTCGTCTCAAGTCGGCCGGATCATCGGCAAGGGCGG
TCAGAACGTTAGAGAGCTGCAACGCGTGACCGGCTCGCTGATCAAGCTGCCGGAACAGCA
ACAGCAGCCGGGAGCCCAAGGACAGGAGCACGAGACCACCGTGCACATTGTCGGCCCGTT
CTACAGTGTCCAGTCTGCGCAGCGTCGCATCCGTGCCATGGTGGCGCAGGCGAGCGCGCC
CGGCCGTCGCCGCGCCGCCCAGCCGCCCCCGCCGCAGCAGCAGTAGGCCGACAGAACACA
CACCCCCCCGCACCCACACCCCACCCCCAGCACCACCCTGCAACCCCAGGTACCTCGCCC
CACCCAGCCCCCGCCCCCGCCCCAACCGCGGCCAGCCTCCGCATTACCCCTACAGCCTGC
ATTAACCAATCGAGCACCCTGTACAGTCAATCTGGTCCGCACTTTGTTTTGTCCTGATTT
TATCTAGATTATTTACTAGGAATAATAGATGTAATCAAAGTTGTCCAGATTAACTGTAGA
CGTGCTCTACATATTCCAACGCTTAGACGTGTTAAAATTATTGTTGTTGTTGTTATATTG
TAACAATTAGCTGCGCCATTATTACGGGCCGCAAAAGGAAAGGTGTGCTTAGACACTGCT
TGATGTGAAGTTGATTTTGCACGACTTTAGATAAATGATTAATTTACGATTTATAATCAT
ATCGGCGCTTTGATTAATATTTACATTATTGAGATCAATTAAAATTTTATGTAAATAAAC
ATCTTGACATGCTTTTATAGTAAAGTTAGTGGAAATCAAAAGTAATTTCAATACTGTGCT
TAGTAGTGTGTCTGAACGTTTTTAAACATAGTTTTTATGTTAGGCTTATAATGTTACTGT
GAGCGCTTTCTGTCTGTATGATGGCCCATCTGGAGTCGTGGAGTCAAGTACACAACATGT
ATAGCCATAAAGTATAAATATATAGCAAAACAATTTATATTAAATTATATAATAATATAC
ATAGCTCATTCGTGATGAGCGGTACCGATGCTTTTAGTTACTTAAATATACATTATATTT
ATTAAAAAAAAAACACAAATAGTACAAAATGATAACAATGTATGTGTATGTAACTCCAAT
GGTTGGAATGTTGAAGTGGTAATGAGTGAGGAGCTGGTTTGATGTGAACATTGTTCGCTC
TGAGTGTATTCGGATTATGCGCAGGAAGGCTGTTGTGTTGGTATATTTCCATTTAATGTT
GTTGTTGTCGTAATTATATTAATCTAGTAAATTATAATGAAATACTTATTGATAGATCCA
TATTTTACCCAGGAATTGTCCTATGTTGATTAATAATTGAGTATATAATTACAAACTATA
TTATTCATATACACTATTTTTAACGATAATTATTATTGTTAATTGTTTTTCATACTGTTA
CATAAATACAAGTAAAGTTATTATAGATTGCAATAGTTACGTTCTATATACTATACACAT
GTTGGTAGGATAATATCTATATAGCACCACATCTTCATATTACGTTTTGTTATAATGTCA
TAGATTAATCTGTTCAGAACTGTTACATATACGATTATATATAATATATATTATTTTGAA
GGGTGTGTGGGAAGATAAACAAGGAACGGATATCGCACGACATTGCTTTAACAGGAGGCT
CAACGGACTTATCGATGCTTTGCACGTATAGTTTAGGAATGTATTTCTTGAAACGATACA
CACTGATTTCTGCATGCCAGTGGTATAAGACGTGGCGCCGCCGTCGAGTGCGCATGCGTG
GCGGCTCGGCGCGGTCAGCGTCGCGGGTGTTAGTAACTATTCCAAAGAGTGAAAGACGAA
GGGTCGTATGTATGGTCGAATGTAGGACGATGGCACCTCGCCACCTCGCCGCCGACGACC
GGGAGTCGGCGACGTCTGCGCACTAATGCGGACTCGCCTCTCCTTTATACACGGAGATGA
TATTCATCCACCTCTCTGATGGATGTCAATATTTTTGATATGGTAGTAATTGTTGGAAAG
TAAGGAGTAATCTTATGATTTTAATTTGTAAGTGGTATTTGTTGATCGTTTTCTTTGTAA
TTTTGTCTTTGTTAGCTTTATAATGTTTTACAGTAAAAAAACATTTGAAAATAGGATACT
TTAGCGTTTAAATGGTGCGAATGTCAACGTCGTATTGTTTGGTTTTGTCGTGATGTTTAA
TTCAATTGTACGATTTGCGTTATAATTGTGCCAAGTGAGATATTTAATGAGAATTTAAGA
TTAAGTGGATAATATCAAAATTTAATGGAAAAGCTTAGATATTTATCTTATAATTGTGAT
AAATTTGGCAAAAATGTAAATCTACATTCTTATTCCATTTTTCTCAATGTTAGGTTAGAT
TTAATATGTGGTAAGTGTAGTGGTTTGCGGGAGACGCCGAGCCGTGCTCGGTCCACTCCT
CGCGCCGGTGTTTGTACTAGTATGTGTAACCATGTACCTTGTAATCTTACGTAATGTAAC
GTACCTATTGCATTTCCCAAATGCATCAAAATAATTCTCAATTCAGCTGAACAACAATAC
GTTGATGAATATCTACAACGTTATTTAAAAGGGGTACAGTTTACTTTGAAAGAACGTTAA
TCGATAAATTACTTTTGAAAGAAATTTGTAAGTTGTTTGCTGCCACATATTCGTAAAAAA
GAATCGTAAAAATTAATCTCACACTTGACATTAACCTTTACAACTTAATCAAACAAACTA
TTGTAAGATGCGATACACTGAATAAGCTACAATAGTCATGAAGGATTGCCAACAATCGTG
ATCATTTGTTCAATTTCAAATGTCTATCGTATTTCCTACGTTAATATTCAATGTAAGAGT
CTGTATTGTACACTGCCACGACAATGATTATATTCATTCTTTGTTATTGATCTCGTTGCG
TGGTGGGTGGGTGGTTTTAACTCAAGTTTTAGAGGATTTGACATATTTGCTATTTTAAAT
ATTTGCTTGCCAATAAGTCTTCTTATTGTTCAATAGGAGTATTAAAAAGTAGCATGTCGT
TTTTTCCCTAAATCATTCATTAATTTAGATAAACTTCTCTAAGTGGTCGTCTAGCAAATT
TGTACAAGTAAGGAAATAGAATATGATATCAAAACAAGCAACATAATACTAATTACACCG
TGTTTCTCATTATTTTTGTGTTAACGTTAGTTAACAGAATGAAAATAATTGGGAAACTCA
TCAAACCTTAATATTTCATATTTGATCGACGACCACTTCATTGTTACTGCGACAGTTACT
TAATTTTTAACTTGAACATATCAGTTTTAGAAGAGCGTATGAACGCCCTCGGAGGCGACG
CGACAAGACAATTATTGCGGATAGACAGTAATGTACAATTTGTACACAATAGAATAGTCG
AAGCAACCGATTTACGTCATAACATCTGTGGCTACATCAACACCCAAGACTGATATGAAA
TTCCTATTCTAAGTATGCATTTGATGTACACTTGCTGTATGTATGTTTGTAAAATACCCT
TGGCAATATTCTTAAAATCTGCACGAATTCAGATTCCAACGCGTGCGTCGGGTTACCGTT
GAAAATTTGGTGTTTTACAGACATTTTTTTGGTAATTTTATTTGCGATCATTATGCAACT
GAACTTTTGTAAGATTTTTCACAATTTACTTCACTGGAATTTAACATATTACCAGCAAAA
ACATTCCAAATGTAATGCCATCTTTGCTGAATGTCCATTAAAAAGATTCACCGAATCTTA
ATAGTCTGTGCAGACAAAACGTGCACACAACAAAATTGACGCACTAAACACGACAAAAAA
TAGTGACAAACAAAACTTACAAATCGCACTTTCCGCGGAATCATTGCTAATACTTATAGT
GTTAATTTTTACACATTTCATCATATTAACCAATTAGCTGGATCTAATCCAAGGATGCCC
CTACAGTATCTTCCGATATTGAAAGTAAAAACAATAAACAATGTACCTAGTTGTGATTCT
GTTGAAGGTGTGAAGTGTATTGGGACTTTGAAAATTTAATAATTGACTGTATTTTTGTCA
ATACATTAAAATCTGTTGCTGATCCGTTTTACTTGGCTAAAACGAGTATTGTAATGATTG
ATCCGCGTGGTGTTCAATATCTAGTCGACACACTGAAGGTGTCGACTTGATGACCCGACT
CGCGTACAAGAGCCACGTTACAATAATGTAATGTTCACCAGAAGGAAACAATAATATTAT
AACGGTTACTTTCACCGCGACATTTATGTTCATTAAACAGACATGCGGTTATAATTCCCA
TTACAGGAGAGGGATTGTTTGATATGCAAAGTTAGGATGCAGAATCATAGTTTTAGTTGA
ATTAATTGTATCGTTGTGAAGTAGTTTAAGTTGAGGGTAAGGCGCTGGCGTCGCGCGGCC
ACGAGACTGAACTACACCCCTGCCGTTGCGTCGTCGCGCCTATTACTTCATGTCATTTTC
GCTAATATACTTTATCATTCTTGTTTAATGATGGTTCTACTGTTATATTTACATTACATT
TTAATTTTTACTTTCATCATGTGTGTAACCAACTTTTTTTTTTTGTGTATACGTGTGAAC
GATTGATTTTATCGATTTCGTTTTTATGTGCATGATTGAATGTATTTTAAAATAGCGTCT
ACTAAGAGTTTAATACGGACAACGCATGTAGCTATTTTGTTTCAAAAAGGTCGCTGATCA
CCTGCATTTTAGTAATAAATTTGGTTCACATTCTATAAAATATTTTATACTTTTAACGAA
ACGAGCACAGAATTGTTATAATGAGCATTGTATGTTACACCCCTTCCACTATGGATATTG
TAATAGTTTCATAGTCTAAAGCTAAATGTCTAATGTATGTGTACGTGTTATAATGTACCT
TGCTGATAAAATAACACGATATCGATGGTTGAGTGAGTGTTTCGAAGCTGCCCATGTGTT
GGAACGTTTCATTGTAGTAAGTCGCACTGAATGAAACCAACGATGTCTGTTATATTTACA
CTAGGATTGGAGAAGTTGTTGTTGCTTCTCATGTAGTTATATGAAGTTCCGTCAGCAGTT
TTTTTTTCTATTAAAACCGGCATTTTTCACCGAAAATTTTCTTTTGATTTTACTGTTACT
TTTAGAACCATTTTTTATGATTGGTATAAGTTTTGAAACTAATAACTACCTCAATATTAC
TAAATGAATATGATAATTATCTTTGTGCGTTTTTGGGAACTGAATTTTAAACTACAAAAT
TTCAACATAGTAGTAAGAATGCTATTTTAAAAATCGTAACTGAAAATTGTCAAAATTAGG
TTTCTTAACGTAATAAAAGTAATGGAAATTGAAAAAAAAAAAA
(6943 bp)

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