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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27127_c0_seq26
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106127574_isoform_X10_[Papilio_xuthus]
Ontology
GO:0001069 F regulatory region RNA binding
GO:0001701 P in utero embryonic development
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0006397 P mRNA processing
GO:0007399 P nervous system development
GO:0008380 P RNA splicing
GO:0010494 C cytoplasmic stress granule
GO:0030326 P embryonic limb morphogenesis
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0045445 P myoblast differentiation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.01 TPM:3.38
ORF EntryO_TrvaMG16501_5prime_partial:A_TrvaMG_comp27127_c0_seq26
Sequence
(Nucleotide)
TTTTTTTTTTTACATATTCAGTTGTTTATTATCTATAATGTACTCAAAATTGATCCGAAG
ATCACATCACATAGTAATTTCATAAATAATATTACAATGTCATGTATTATTCTGTGATTG
TTCGTGAATAAAAAAAAATCACAATATTAATCATAATTTGTTCACTGGACCGGTTTACAT
TTAAGTAGTCTGTAGATACATATGCTACATATTACGATACCATTATTTAGGTACTCAAAC
ACTTACAATTTATTTGATGAGAGATTATTATAATAGTAAATTATTATTGTGTTGCAGTTC
ATTTTTTTGTCATAATATTTACAGTTTTACATTTTTTTTTGTGATTTACAAATAAATTCT
TGAATATTAAATTAGGTCATCATTATTCCATTTGGATTTACAATAACAGTACTTTATAGT
TAAAAATATCACAAAAATGAAATATATTATGTGTAAGACACACGCAACATTAAAAATACA
ACAAAAGAAAAATATAAAATCCACTAGAAACCTTGGGCCAGAATAGTCCCTTCTAAACAG
GAAGGATACTTTCGATGTTCATCTTTCATTTCGGCAATTTCATACCATAATTATTATTAT
CACACTAATTAATTAATTATAAAAGTAATCGATTGTCTTACAATAAATGCGTCAGATCAT
AAAATTTTGATTGTAAAATTATAGGTAACAAATAATCAAATAATATTCAAAGAAACGATA
AATTTTAACAAAAAAGTTTAAAATAAAAATGCCAACTTATAGATAGAGCCATAGTGCCGT
ATTGATAAAAGCGAACTGTTCATCTTAGCCACTAGCACGGGATACAACAACAACCAATCA
ACATAAACAAACGCTACTCACGAGTTTGACTCCGCATCCAATATTCACCTTTTATCGATA
TGGCATTCCACTTACGTTACGACAATAAATATACATAACACGCTTACACATTAATCACTT
CTTTAATTCCGACGCTAGGAATTATTTCATAATATATACCTAAAAATATAATCACGGCAC
AAGTATCCCTCCGACTAAATTACTAAAGTAGTGTCACTTTATCAGGATTTAGAATCAAAT
ATGTATTATGTATCTTAAATATTTCATTATTAATATATCATTATCAAAATATCCACTAAA
TGGGAGGAATAAATCAAATTATTATTATTTTAAATCTAACATTAATCGCATGACTGATCA
ACAAAAGGATATGGACTAGGAATAATATTAGGCATCAGGCTTCCATGCCCCCGGAGCGCG
TGCGTGCTAATGATACAAAATCGACTATTATTATCAGCCAGAAACTGATGACTAGCAACT
GACCATCGATTACTAGTATCCTGCAACCGAGTACTAGTAATCGACCAATCGACTACCAAC
AATCTGTGACTGACTACTAGCAATCGGTGACTGCCTGCTAGTGACCGTCAACCGACTTCA
GGCCATGACTATTAGCGACCAGTGAACCGAATGCTAGTCAGAGGACGTCGACTAGCGCAC
GCACTCCGCCTCTCTCTATACGCATACCACCTCTAACGTACGTACCACCAGATAAATTTC
ATAAAAACCTTAATACTGTTTATAGTGAAAATAACGTAGCTATTACACAATGCACCATCG
ATCGAACTCGATCATCGGTAACAATTTGTGCATCGATAGACAGATTCTGATTTTAAGTAA
ATAAAACGGTATTCTAGCAAAATCTATCCGGAATATAAGCCGACTTTTTATTCTAAAATA
GCTTGGAAGTATGCCTTTTTCGTTTCAATATTGTCTGATGACTTTCATTGTATTTCGAAT
TCATGATTCCTATTACTCTACGAGTATCGCGATCGACTCTAAAGTGCGAACGGGACGAGG
CGGTAGGCGCGCGGGTTAACCGAGGCCGATGCGCCGCTCGATACTGTGTCGTAATCAAAC
TTCACAGTGACGACTCGTGTCGTCGAGAACGACGTCATAACGTAATTTCTGGTTGTACAG
TATAGTACGTGATCGTGGGATATAGTTATGGAATATAGGTCGACGGCGTTCACTACTGTA
CAACACAAGGTCCGCGTTTACACACATCGTTGTGACTTGTGCTCCGGCGACAAATTGTCG
AGCCGAAGGAGAGAAGCGGCTACTCTATTGGTGTTTCGTTACTGATTCACTTAAATCTAA
ACTAGTGTAAACTTGTCCTCTAGAAAAACGTAATTTTATAACATACGTAAAAAAGTAAAA
TAAATCTCACAAAAAATGCTCTTACAGGGACTGGGGTGATGTATTAGATTGACACTGATC
GAGGAGTCGCCGAGAGACGTACTTCTTGACGTCTCCTCTCATCACCGGTCAAATCACATC
GCTTATATACAACAAAGTATCCGGGCAACGAAGACCCGGTTTATTACAGGAACTCATATC
GTTTCTTAAAAAATTATACATTAGTCATAAAATATTTGAAACCTCACTAACTACCGCTCG
ACGATCTCGACAAATAATTTCATACGGCTCCGGTTTTCCGAAATCTATTCATATCACAAT
CGCATGACCGTGCCTGAGAATCACATCCCGCTACTTTATGTACACACTCTTTCCCGAAGA
CTTACGCTCATTCCGGGCGAGAGCGAGCCGCGGCAGCAACGTCCGCGACGGCTCGACCCC
ACCATCTAAACTAACCGATATCCACAATAATATCACCACCTCTGCCGCCGAAGCGACAGT
AACAGTCGGCCAAACCTGCCTTTCCCGAGTGTGCCAGGGGCGAGATCGATATGGGTAACG
CAGGGCGCGGGCGACGATGAAGGGGAAGAGGATCATACTAGGAAGGGGTGGGTGTGTGAG
TGTGGGTAGGTATACGTGGGGGAGGGAAGGGCGCGTGGTTGTTAGGGAGGACGTAGAGCC
GGTGGCAACTGAACGGGTATGTGGTAGTAGCGACAGAGGGCGCGGCGACACGTGCCGGCG
GCGGCGTCGCGACACACCACCACGCGGCACCCCACCACCTGCAGCCCGCACCCTTCACGA
ATATGAACGAATCTGCAGGTAGGTCTTGAACATCCTTGCCGATTAAAATCTTGGCACACC
GGGAGGGTGTCCAGTAACTGAAAACATACGGAAACATTCGTTAGTATTATTGTCATAGTT
CCATACTTATTTAATCAATCACGATTACATTCGTTTCCACAATGATGGCTATAATTATTT
TGAATAAATTCCTAAATCAATTAGGCCGATTAGATAAAAATTAAATCATTCTTTTTTGGT
ATCACTTGTAAATATATTAGGCCTTTTAAATTATTATATTTAGATATACTCATTTATATG
GCATTATTTAAAAAAAAATGCCTGTATTATTTGACCATCGTGGAACACCATGTCCTCGTG
TACTAACTAAATACTACTTCACAAACAGTCGTACAAAAACAATTTTATTATTAAGTATAT
TAAAATTACTTGTTTTGTTAAAAACTATGCCATACAACGACGGTTTGTGAACTGTATGTT
AATAGTGTTAATACTAATACTATTTCATCACTTTATAGACATTCATACATCGGACATTAA
ACATTATCCTCATTGCACAGCCATCTGAAAAATAACGCTCTTTTAGTTTTTGTAATATCA
AAGAGCAAATCTTGTAATTATGAATAAATTACTTTATTAAGAACAGCCCTGTATTTTTAG
GTCATAATGGTCGAGTGTCAAAGATTTATAAGTAACGATGCGCGTGTAGTTTCTCGGTCG
CTACGGCATTTAACACAGACGGGACACACGGAATGCGGAATTTGCAAAGATAAAAATATT
ATTGCTGCTTTCATATTACAAGAACTTTACATGATTCGTTGCACAATATGATTGGACCTT
CCAAGCATTCTTTTAGAAACGTGCGCACCGAATAGTGTGTCACCTTTATATTGTAGAAAT
TCCATTGCAATAAACTGTTGATTAAAAATTGAAACGTACACAAGTGTATTTATTGTAAGA
AGATTGGCAGTAAGTTATTCTCATGAACGAGTTTCCGTAACCGTCAGAGAGTTGTGTTAA
ATTACGCTGCACTATGCACATAGTAGGTATGAATATATATCTAAATGGCATGCAGAACGC
TTGAAGTAATCATTATTGCGCAGCCAATCTTATTTAAGCGTGACTATATTTTACAAAAAA
GCTTAAGCATGATGCTAGACAACTTTTACCAGGGCGGAGGGCGTTCTAGAGGTTTGTAGC
GTCCAAAGTGTACCCATAAATACCAACTGTTGCTATAGGAAAGCTTAAATAGGCTGTGTG
GGGACGCTTCTGCGTCGCTCTTACATCTCCCGATGCTCTCAGTGTAGGACAGAGGACGGT
CATGCTCTCGGCGGGTTCGCGTGGTTATAATGTAAATAGACAAATTATATTTTATACCTT
TAGCTTACATGACAGTTCTGGACGTGACATGTTAGTGGTAGTACAAACTGCAACATAATG
ACCATTAGAGAGTGCTGTTACTGTACGACAAACAAAACAGAACCAAGTAGTCTTATTACG
TCTACGTGAACATTATAAATAAGCATCAGAGGAGGCTTCAACAAGTCGTAAGCGAGGATC
GAAGCCGCTTCGGCGAAGCACTTTAAGCATCTTTAAGACAATTCGAAGTGTAATACTTTA
TTCAGTTGTTTACTAATCAAATCAATTCACTCTCCCTACACCTACCAAAATATTAATAAT
AGTTATTTGGTAATTTTAGGAACCTTCATTTATACAACATATATATATCACTTCGATTTC
TCTTATTCCACCATAGTCATTTCAACTACCAACTACGCACAAAAATAATTAAATTATCTT
TGAAATTATTTAAAAAAGCGTTACTATGAGTGGAAACAAAACCCCCTTATTAGCGGTTGA
TAGTTGACACTGGCAAAAGGTGAATTATAAAGCTGCTAAAAAGTTGACATTGCGTGGGTC
TAATTTCTAAAATTCTAAAACAAACTAATTCAATATCAAGACTAAATGTTCCGCGATCAA
TAAATCGAAGTCAACTTTTTAACAGATGATAAAGGCTTCGTTATAACTTCATTATAAAAT
AATACCTGTACTGAAACAGCCGCTCGATTAGGTAAATTAAGTATTTTAAAAATTAGTTTT
AGTTTAAGCTCTTTATAACACAGCGTTTTAGATTCATTATTATTTTTCTTTCATGCAAAC
GCAAGCGGCACGTTTCAATATAGGCGGACAAACAGGAAATTCACTTATACTCAGGATATT
ATAAGTAAGCTGATTGAATCTTACCAGGTGTAAGCAAGGCAATACTGTAGAGTGACTTCT
TCCACATTTGAAAGCAATTATGTTTCACTATACAAAAACTAAAAAAACACCAAGTTGTAG
CATCAACTGTTCATTATAATCATAATAATCGATACAGTTTTAGCACAAGGACTAAAATGA
CATGAGTGATGATATCAATATAATACTTATGATACGCTTCGGTAGTGATGGCGTCCAATC
GATCGGTAACCACACAGATCAGTAATAGATCAACCACTGCACATCTTTACGTACCAATTA
CATAGATTCACGTGTTCACTTTCATCATACATTAAGGATGCGAATGGGTTTTGCCACCTG
CTCAGTAGGAAAGGAAGATTGTGCTTTAAATACGTGTAATTTGATAAGATTATTAGTGTC
TCCTTTCCTCGTTTGCGTGTCGACAGGTTAAAATAAGAAAGTCAATTATTGAAGCGTACC
TTGACCCGAGGCAGTGAAGGTCGCGACGGATGAAATAGCCGCTAGTCGTGATCGACTCGT
CTGTACACTGCTCGTTAATGACAAGCGCTCAGTCTACTTACTAAGCACACAAGCGTTGTG
AAATTAAACTTACATCTATAGAAGCAGTATAATAAGCACGCTCAAATTTATCTTTTTTTA
TATCTAATCATATGTGAGGTTTACTAACTTTGAAAAACAACAACATAATATGATGATAAA
TGTTTATTAATATTATGTCACATTAGGCCAACCATAATTATTTACTACTTGTACGAATGA
TTTACATGATAAATCAGTAACGACAAATGGTCTCTATATTTGAGCTTAGAAATAAAAAAA
TACAAGCGTAGGTATTAGATGCGCGGTAAGAGGTGGTATGCTGCATAGCGTACTGGTTAG
AGCAGGACCAAGTGATATTGTCACAACGCAGACAGTCAAATGTGTTGCTACATGCGAAGA
ATTCCTTATGGACCCAAGGGAAACTGTCGCCTAGTTAACAAACATATTATCTCCCTAACA
AATCACAGTTCATCTAATTATTCAGACATTATTCCAGTCATCGTCAATCATGTGAAAACA
AAATAATAATATTAATATAATGAGGCAAGTTGTAACTGTGATATATCGGGAGACGGACAT
TGGTGTAGAGTAGCGTTAGGGGAATGGTGTAGTGGTAAGCGAGCGGACACACACGCGACA
CACGTTACCTGTCCGCGCTCGTCCGTGTACACCACGTAGGGCGCGTTGGGAGGCGTACAG
CCTGTCCGTATATTCCAGACACATAAAGCGACAAAAGATTGGTTATGCGGACGACAGCCG
AAGCGATCAATCGGAAGGCATGTAACAGAAAGCGTTTCATGTGAAAATAAATAAGTGCCA
CTTAAAGAAAACGAGAATACGGCGCACGCCGCTCTCTACGCTCTACTGATGAAACACTCT
GGCACACGCAGCACACACGAGGAGCACTAGAATAATGAGAGTAATACCTGAAGAGCCAAA
CGTACAGGGGTGGTGGATTCTATTCCATGCGAAAATTAGAAGGCGGCTGTGTTAGGTGCG
GGCTTGCCGCCGCAAGCCGGTAACCACTAGGTAGGTACGGAATCGACACATCGGCCAAAG
CGCACCCGTGCGGAGCTCCTCCGGGAGCAAGCGTGTACGTAGCGGGATCGACGGACCAAG
CACTCAACTCTCAGTACGACGGTACTCACGATAAACGACGATCGACAAGAGTAATAACAA
AACGTACAGTCATGCATCTCAAGCGTTATTATTACCGGGATCGTAGATACGAGAAATATA
CACGCACAAAATATCGACGTAACTGAGCGAATACACAATAATAATATATAGATACAGCAT
AAAACTACAGAGACATCCGCGAGGGCACGGGCCGCTCGCTTCGTCCTCACAATAATACAA
TACAAATGTGACAACACCCCTAGCGCTAACCACCCCGACAGACCGGGGCGGGCCACTCGG
TGGCACACGTACGAGTCTCTACGCGGAGACCCCGCGCTCGCGCCCCGCCGGCCGCGCAAC
GCTCTACGTGGTCTTCATCTTTTTGTAGGGGTTCACGGCAGCCGCCGCCGCCGCCGCAGC
AGCCGCCGCCGACGGCGGGGCCGGGGGAGGCATCGCGTACATGTACGGCTGCTGATAGAA
CGCAGGCATCGGCATGGGCGGCGCGGGCCAACCCGGTCGCATCATCAGGGGCGCTCGCAT
CAGCGCCGGCATCGAGGCGCGCGCTTTCAGCGCCTGCTGCGTGTACGCAGCTGCTGCCTG
AGCCATGGCAGAGTGCTGTGCGGCGAACGCTAGCGCCGCCATGTAGTTCTTCTGTGCGAC
CTCTTTGGCGACTGCGGCGGGATCGGCACCGTCGGTGGGCGTGCCTGGCGAGGGAGAGGA
CGGCTGCGGCGGCGGCTGAGCGGGCGCGGGCGCGGGAGCGGGCTGCGG
(7668 bp)

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