SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27127_c0_seq25
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X2_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:0.49 TPM:0.41
ORF EntryO_TrvaMG16498_complete:A_TrvaMG_comp27127_c0_seq25
Sequence
(Nucleotide)
CTACACTTGACAACTACAATACAAAATACATGAAAGAGAAAAATACATAATATAATAGAC
ATTAAATCGAAACTAGGTTAATCTACATTTCCAGTATAATATAGAGAGAGACAACACTAA
AAACATCTAAGTATATTCGTAATAGTGAAATCTAAATCTATATTACAACATCAAATCATG
CACAATAATATAGGTATTTGGATAAGGATAGTACGGTTAAATACAATTTATAATTTTTAG
ACCGTATCGGTCGTCATGGTTAATTTAGTTTTTATAATTTCATGCTTTAAATTTGTTCAT
AAACAGCCAATCGTTTGTGACATCAACAGGGTTGTAGGCAGAATGTAATCTCACCTTCAC
GAATATGAACGAATCTGCAGGTAGGTCTTGAACATCCTTGCCGATTAAAATCTTGGCACA
CCGGGAGGGTGTCCAGTAAATGACACGGGCACGAACGGCTGCTGGAGCTGCATCAGTTGC
TGGTAAGTTGTCGCCGGTTGATACACTGGCACGCCGGCCTTGTCGGCAGCTGGCCGCTTG
TACGGCATCACACCGGGGAACGCAAAGTTATCATAATAGAAGGAACCGACGCTCTTCATG
TCCATCGGTGGCGGCTCGAGCTCGGCGGGCGCTGGACGCTTCTTGCCCGTCTCCGAAGTT
GTGCTCGCTGCCGGCGACTGCACTGCTGCGGCCGTCTCGAGGCGATCAGTGCGAGGCAAT
TTCTGTTGCAGCACAGGTTGCTGCATGACGCCGAGCGGAGAGGCGGCTGCTGCTGCAGGG
TCGTGGCCCAGCATCGCGGGCACCAGCTGAGGTGCATAGTACTGAGCGTACGTCGACCCC
ACGCCAGGTACTCCTGACAGATACGGTGACGTCGCCTGCGGGGCGAGCAGGGCGAGACTG
ATTGGATCCAACGCGGTGAGATGACCAGCGGCCGCGCCCGCGCCGCTCATGCCGCCCACC
ACGGCGGGCACCTGACCGGGCAACACTTGCCCGGGTGTCAGACCCATTTGCTGCATTAAT
GCGTTCTTCAATGCTAGGTGATTCCGGCCGTTGATTAACAGCTGATCCTTGAGGTGCTGC
GGCGGATGGAAGTATTTGCAAGGTGGTTTTTCACGGTTACACCGACCCTTGATACTGTCG
TAGCAGGCGGTGACTCTTCCATTCTGAACCTCGACAGTAGCCGGAGGATGCGCAAACTTG
CACTCGGTGTCAGGTCGCGAGCACTTATTCCGCTGGAATTCTCGGCATACTTCAAGTTGT
AACCAGCGGGAGTCCTTTCCGTTGAGTAAGCTATTCATGTTCACCATGGTGGCCATCGTT
GGCTATGTGTTCAAAGGAGGCGGTAGTCGCGCGCACAATTACGCAGTGCGAGTGCGGCGC
ATAGGCAGGGACAAGGGGCGAGCGCGACGCCGCGCTCTTTGCTTACACTTCTCACACTGC
CTTGACGCTGACTGTACTCTTGGCCACTGACGGCACTCGCGCACCCTCACTATCACTCAC
TACTGCACACGCGTAAATATATTCCGCAGCGGGAGACGCGCGGAAACGATGATAGTTACT
TACTAATTGATTAATCTTACAATTAAGTTAGAATTAAGACACCGACGTTGCAAGCTTATT
TAGGCAAGTATTAAATTATTGTTATCACACGCGGTTTATCGGTATCGACTGATGATTTTA
GTAGAGGGCGAGCTGTGCTTGGTGCGCGAGCATTGCGGCTGCCGGTGTGGAACTGGGCTG
GCGACGGTGGGGCGCGAAAAAAGCTAGATTAGCGGCTCGGCGGTCAGCGAGCAAGCCGGT
GCGGTGCGGGGCTCAACTTCAAATGGGAGCTCCTTTTACAATGATATATGACTCCAGGAT
GAAATCTTGTTCAATTCGCTGTCCGGAGGCCGATATCACGGTAATTTTGCACAGTTTTTG
TCACAATTAAATAATAGTGTTAATTTTAGTTAAGAAATAGGTTTGCATCACAGAAATAAC
TAAATAAAACCGAAAACATTAAAAGCGGACAAGAAGCGCG
(2020 bp)

- SilkBase 1999-2023 -