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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27127_c0_seq23
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X5_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:2.08 TPM:1.75
ORF EntryO_TrvaMG16496_complete:A_TrvaMG_comp27127_c0_seq23
Sequence
(Nucleotide)
TTTTTTTTTTTACATATTCAGTTGTTTATTATCTATAATGTACTCAAAATTGATCCGAAG
ATCACATCACATAGTAATTTCATAAATAATATTACAATGTCATGTATTATTCTGTGATTG
TTCGTGAATAAAAAAAAATCACAATATTAATCATAATTTGTTCACTGGACCGGTTTACAT
TTAAGTAGTCTGTAGATACATATGCTACATATTACGATACCATTATTTAGGTACTCAAAC
ACTTACAATTTATTTGATGAGAGATTATTATAATAGTAAATTATTATTGTGTTGCAGTTC
ATTTTTTTGTCATAATATTTACAGTTTTACATTTTTTTTTGTGATTTACAAATAAATTCT
TGAATATTAAATTAGGTCATCATTATTCCATTTGGATTTACAATAACAGTACTTTATAGT
TAAAAATATCACAAAAATGAAATATATTATGTGTAAGACACACGCAACATTAAAAATACA
ACAAAAGAAAAATATAAAATCCACTAGAAACCTTGGGCCAGAATAGTCCCTTCTAAACAG
GAAGGATACTTTCGATGTTCATCTTTCATTTCGGCAATTTCATACCATAATTATTATTAT
CACACTAATTAATTAATTATAAAAGTAATCGATTGTCTTACAATAAATGCGTCAGATCAT
AAAATTTTGATTGTAAAATTATAGGTAACAAATAATCAAATAATATTCAAAGAAACGATA
AATTTTAACAAAAAAGTTTAAAATAAAAATGCCAACTTATAGATAGAGCCATAGTGCCGT
ATTGATAAAAGCGAACTGTTCATCTTAGCCACTAGCACGGGATACAACAACAACCAATCA
ACATAAACAAACGCTACTCACGAGTTTGACTCCGCATCCAATATTCACCTTTTATCGATA
TGGCATTCCACTTACGTTACGACAATAAATATACATAACACGCTTACACATTAATCACTT
CTTTAATTCCGACGCTAGGAATTATTTCATAATATATACCTAAAAATATAATCACGGCAC
AAGTATCCCTCCGACTAAATTACTAAAGTAGTGTCACTTTATCAGGATTTAGAATCAAAT
ATGTATTATGTATCTTAAATATTTCATTATTAATATATCATTATCAAAATATCCACTAAA
TGGGAGGAATAAATCAAATTATTATTATTTTAAATCTAACATTAATCGCATGACTGATCA
ACAAAAGGATATGGACTAGGAATAATATTAGGCATCAGGCTTCCATGCCCCCGGAGCGCG
TGCGTGCTAATGATACAAAATCGACTATTATTATCAGCCAGAAACTGATGACTAGCAACT
GACCATCGATTACTAGTATCCTGCAACCGAGTACTAGTAATCGACCAATCGACTACCAAC
AATCTGTGACTGACTACTAGCAATCGGTGACTGCCTGCTAGTGACCGTCAACCGACTTCA
GGCCATGACTATTAGCGACCAGTGAACCGAATGCTAGTCAGAGGACGTCGACTAGCGCAC
GCACTCCGCCTCTCTCTATACGCATACCACCTCTAACGTACGTACCACCAGATAAATTTC
ATAAAAACCTTAATACTGTTTATAGTGAAAATAACGTAGCTATTACACAATGCACCATCG
ATCGAACTCGATCATCGGTAACAATTTGTGCATCGATAGACAGATTCTGATTTTAAGTAA
ATAAAACGGTATTCTAGCAAAATCTATCCGGAATATAAGCCGACTTTTTATTCTAAAATA
GCTTGGAAGTATGCCTTTTTCGTTTCAATATTGTCTGATGACTTTCATTGTATTTCGAAT
TCATGATTCCTATTACTCTACGAGTATCGCGATCGACTCTAAAGTGCGAACGGGACGAGG
CGGTAGGCGCGCGGGTTAACCGAGGCCGATGCGCCGCTCGATACTGTGTCGTAATCAAAC
TTCACAGTGACGACTCGTGTCGTCGAGAACGACGTCATAACGTAATTTCTGGTTGTACAG
TATAGTACGTGATCGTGGGATATAGTTATGGAATATAGGTCGACGGCGTTCACTACTGTA
CAACACAAGGTCCGCGTTTACACACATCGTTGTGACTTGTGCTCCGGCGACAAATTGTCG
AGCCGAAGGAGAGAAGCGGCTACTCTATTGGTGTTTCGTTACTGATTCACTTAAATCTAA
ACTAGTGTAAACTTGTCCTCTAGAAAAACGTAATTTTATAACATACGTAAAAAAGTAAAA
TAAATCTCACAAAAAATGCTCTTACAGGGACTGGGGTGATGTATTAGATTGACACTGATC
GAGGAGTCGCCGAGAGACGTACTTCTTGACGTCTCCTCTCATCACCGGTCAAATCACATC
GCTTATATACAACAAAGTATCCGGGCAACGAAGACCCGGTTTATTACAGGAACTCATATC
GTTTCTTAAAAAATTATACATTAGTCATAAAATATTTGAAACCTCACTAACTACCGCTCG
ACGATCTCGACAAATAATTTCATACGGCTCCGGTTTTCCGAAATCTATTCATATCACAAT
CGCATGACCGTGCCTGAGAATCACATCCCGCTACTTTATGTACACACTCTTTCCCGAAGA
CTTACGCTCATTCCGGGCGAGAGCGAGCCGCGGCAGCAACGTCCGCGACGGCTCGACCCC
ACCATCTAAACTAACCGATATCCACAATAATATCACCACCTCTGCCGCCGAAGCGACAGT
AACAGTCGGCCAAACCTGCCTTTCCCGAGTGTGCCAGGGGCGAGATCGATATGGGTAACG
CAGGGCGCGGGCGACGATGAAGGGGAAGAGGATCATACTAGGAAGGGGTGGGTGTGTGAG
TGTGGGTAGGTATACGTGGGGGAGGGAAGGGCGCGTGGTTGTTAGGGAGGACGTAGAGCC
GGTGGCAACTGAACGGGTATGTGGTAGTAGCGACAGAGGGCGCGGCGACACGTGCCGGCG
GCGGCGTCGCGACACACCACCACGCGGCACCCCACCACCTGCAGCCCGCACCCTTCACGA
ATATGAACGAATCTGCAGGTAGGTCTTGAACATCCTTGCCGATTAAAATCTTGGCACACC
GGGAGGGTGTCCAGTAAATGACACGGGCACGAACGGCTGCTGGAGCTGCATCAGTTGCTG
GTAAGTTGTCGCCGGTTGATACACTGGCACGCCGGCCTTGTCGGCAGCTGGCCGCTTGTA
CGGCATCACACCGGGGAACGCAAAGTTATCATAATAGAAGGAACCGACGCTCTTCATGTC
CATCTCGAGGCGATCAGTGCGAGGCAATTTCTGTTGCAGCACAGGTTGCTGCATGACGCC
GAGCGGAGAGGCGGCTGCTGCTGCAGGGTCGTGGCCCAGCATCGCGGGCACCAGCTGAGG
TGCATAGTACTGAGCGTACGTCGACCCCACGCCAGGTACTCCTGACAGATACGGTGACGT
CGCCACGGCGGGCACCTGACCGGGCAACACTTGCCCGGGTGTCAGACCCATTTGCTGCAT
TAATGCGTTCTTCAATGCTAGGTGATTCCGGCCGTTGATTAACAGCTGATCCTTGAGGTG
CTGCGGCGGATGGAAGTATTTGCAAGGTGGTTTTTCACGGTTACACCGACCCTTGATACT
GTCGTAGCAGGCGGTGACTCTTCCATTCTGAACCTCGACAGTAGCCGGAGGATGCGCAAA
CTTGCACTCGGTGTCAGGTCGCGAGCACTTATTCCGCTGGAATTCTCGGCATACTTCAAG
TTGTAACCAGCGGGAGTCCTTTCCGTTGAGTAAGCTATTCATGTTCACCATGGTGGCCAT
CGTTGGCTATGTGTTCAAAGGAGGCGGTAGTCGCGCGCACAATTACGCAGTGCGAGTGCG
GCGCATAGGCAGGGACAAGGGGCGAGCGCGACGCCGCGCTCTTTGCTTACACTTCTCACA
CTGCCTTGACGCTGACTGTACTCTTGGCCACTGACGGCACTCGCGCACCCTCACTATCAC
TCACTACTGCACACGCGTAAATATATTCCGCAGCGGGAGACGCGCGGAAACGATGATAGT
TACTTACTAATTGATTAATCTTACAATTAAGTTAGAATTAAGACACCGACGTTGCAAGCT
TATTTAGGCAAGTATTAAATTATTGTTATCACACGCGGTTTATCGGTATCGACTGATGAT
TTTAGTAGAGGGCGAGCTGTGCTTGGTGCGCGAGCATTGCGGCTGCCGGTGTGGAACTGG
GCTGGCGACGGTGGGGCGCGAAAAAAGCTAGATTAGCGGCTCGGCGGTCAGCGAGCAAGC
CGGTGCGGTGCGGGGCTCAACTATGATGAGGGGTAAAACAAGCCGGGTAAAGGGAGCGAA
TAAAATGTCCAAAGTTAAATCATATTAAGTTGCACTTAAGTTAGGAGAAATATATCGTCG
GTAGCGTAGAGGTCGCGGTTCGCGGCCACAGCGGGGCGGCACGCGTCGTGTTCGGAGCAC
GAGTGCGGTGCACAGAGCGGCGCGAGTCACACA
(4473 bp)

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