SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaMG_comp27124_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		putative_copia-like_polyprotein_[Ipomoea_trifida]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.72 TPM:2.29
ORF EntryO_TrvaMG16351_internal:A_TrvaMG_comp27124_c1_seq1
Sequence
(Nucleotide)
TATTATTTGAAAAAATGAAAAAATCATCTACATAGAGAGTGACAATTGTTTTCAATTTAT
CCTGTGTTTTCAAAAACATACATGGTTCTATCTTAGATTTAACATAGCCAATTTTTAAAA
GACATTCTTCTACTCTCTTGTACCAGACTCTTGAAGACTGCTTCAGACCATACATAGATT
TCTTTAATTTAAGAACTTGACCTTTCTGTACTGGTTCAGAAAAACCTTTAGGTATGTGTA
TATAAATATCTTCTTCAAGAAGTCCGTACAAGAAAGCAGTTGTTACATCAAGATGTGTTA
TATCGAGGTCAAGTTGAACAGATAGGGCAAATAA
(334 bp)

- SilkBase 1999-2023 -